| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is oxa
Identifier: 53723018
GI number: 53723018
Start: 2701464
End: 2702273
Strand: Reverse
Name: oxa
Synonym: BPSS1997
Alternate gene names: 53723018
Gene position: 2702273-2701464 (Counterclockwise)
Preceding gene: 53723019
Following gene: 53723014
Centisome position: 85.16
GC content: 65.93
Gene sequence:
>810_bases ATGAAATTCCGACACGCGCTGTCGAGCGCATTCGTTTTGCTGGGTTGCATCGCCGCGTCGGCGCATGCGAAGACGATCTG CACGGCGATCGCCGATGCGGGCACGGGCAAGCTGCTGGTGCAGGACGGCGATTGCGGCCGCCGCGCATCGCCCGCGTCGA CGTTCAAGATCGCGATCAGCCTGATGGGCTACGACGCAGGCTTCCTGCGCAACGAGCATGACCCGGTGCTGCCGTATCGC GACAGTTACATCGCGTGGGGTGGCGAAGCATGGAAGCAGCCGACCGATCCGACGCGCTGGCTCAAGTATTCGGTCGTGTG GTATTCGCAGCAGGTGGCGCACCATCTCGGCGCGCAGCGCTTCGCGCAGTATGCGAAGGCGTTCGGCTACGGCAATGCGG ACGTGTCCGGCGATCCCGGCCAGAACAACGGCCTCGATCGCGCGTGGATCGGCTCGTCGCTGCAGATCTCGCCGCTCGAA CAATTGGAATTCCTCGGCAAGATGCTCAATCGCAAGCTGCCCGTGTCGCCCACAGCCGTCGACATGACGGAGCGGATCGT CGAATCGACGACGCTTGCCGACGGAACGGTGGTGCACGGCAAGACCGGCGTGTCCTATCCGCTGCTGGCCGACGGCACAC GCGACTGGGCGCGTGGATCCGGCTGGTTCGTCGGCTGGATCGTGCGTGGCAAGCAGACGCTGGTGTTCGCGCGCCTCACG CAGGACGAGCGCAAGCAGCCCGTTTCAGCCGGCATACGGACGCGCGAGGCCTTCCTGCGCGACTTGCCCCGGCTTCTCGC CGCGCGCTGA
Upstream 100 bases:
>100_bases TCGTATCCGTCGAGCGAACGAGTGGCGGCCGGCTATAGAATCGTCGCTTCGATCGTTCGGGCCGAACGATGAGCCATTCC CCACTCTTTGCGGAACAACA
Downstream 100 bases:
>100_bases CGCGACGGCGGGCCGGCGCGTCGGCGCGCTGTCCCGCTGCATGGCCGCGGTTCGCCGGGGCGCGGTCTTCGTGAACGGCA AAAAGCGGCAGGCATCGCGA
Product: beta-lactamase precursor
Products: NA
Alternate protein names: Oxacillinase; Penicillinase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKFRHALSSAFVLLGCIAASAHAKTICTAIADAGTGKLLVQDGDCGRRASPASTFKIAISLMGYDAGFLRNEHDPVLPYR DSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAHHLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWIGSSLQISPLE QLEFLGKMLNRKLPVSPTAVDMTERIVESTTLADGTVVHGKTGVSYPLLADGTRDWARGSGWFVGWIVRGKQTLVFARLT QDERKQPVSAGIRTREAFLRDLPRLLAAR
Sequences:
>Translated_269_residues MKFRHALSSAFVLLGCIAASAHAKTICTAIADAGTGKLLVQDGDCGRRASPASTFKIAISLMGYDAGFLRNEHDPVLPYR DSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAHHLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWIGSSLQISPLE QLEFLGKMLNRKLPVSPTAVDMTERIVESTTLADGTVVHGKTGVSYPLLADGTRDWARGSGWFVGWIVRGKQTLVFARLT QDERKQPVSAGIRTREAFLRDLPRLLAAR >Mature_269_residues MKFRHALSSAFVLLGCIAASAHAKTICTAIADAGTGKLLVQDGDCGRRASPASTFKIAISLMGYDAGFLRNEHDPVLPYR DSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAHHLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWIGSSLQISPLE QLEFLGKMLNRKLPVSPTAVDMTERIVESTTLADGTVVHGKTGVSYPLLADGTRDWARGSGWFVGWIVRGKQTLVFARLT QDERKQPVSAGIRTREAFLRDLPRLLAAR
Specific function: Oxacillin-hydrolyzing beta-lactamase. Confers resistance to beta-lactam antibiotics but at a significantly lower level than the TEM bla gene product [H]
COG id: COG2602
COG function: function code V; Beta-lactamase class D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-D beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR002137 - InterPro: IPR001460 [H]
Pfam domain/function: PF00905 Transpeptidase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29496; Mature: 29496
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00337 BETA_LACTAMASE_D
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRHALSSAFVLLGCIAASAHAKTICTAIADAGTGKLLVQDGDCGRRASPASTFKIAIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEE LMGYDAGFLRNEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAHHLGAQR EECCCHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCHHHEEEEHHHHHHHHHHHHHHHH FAQYAKAFGYGNADVSGDPGQNNGLDRAWIGSSLQISPLEQLEFLGKMLNRKLPVSPTAV HHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEECHHHHHHHHHHHHCCCCCCCCCHH DMTERIVESTTLADGTVVHGKTGVSYPLLADGTRDWARGSGWFVGWIVRGKQTLVFARLT HHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCHHHCCCCEEEEEEEECCEEEEEEECC QDERKQPVSAGIRTREAFLRDLPRLLAAR HHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFRHALSSAFVLLGCIAASAHAKTICTAIADAGTGKLLVQDGDCGRRASPASTFKIAIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEE LMGYDAGFLRNEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAHHLGAQR EECCCHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCHHHEEEEHHHHHHHHHHHHHHHH FAQYAKAFGYGNADVSGDPGQNNGLDRAWIGSSLQISPLEQLEFLGKMLNRKLPVSPTAV HHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEECHHHHHHHHHHHHCCCCCCCCCHH DMTERIVESTTLADGTVVHGKTGVSYPLLADGTRDWARGSGWFVGWIVRGKQTLVFARLT HHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCCHHHCCCCEEEEEEEECCEEEEEEECC QDERKQPVSAGIRTREAFLRDLPRLLAAR HHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9756755 [H]