Click here to switch to the map view.

The map label for this gene is yncE [C]

Identifier: 53723019

GI number: 53723019

Start: 2702920

End: 2705784

Strand: Reverse

Name: yncE [C]

Synonym: BPSS1998

Alternate gene names: 53723019

Gene position: 2705784-2702920 (Counterclockwise)

Preceding gene: 53723020

Following gene: 53723018

Centisome position: 85.28

GC content: 67.02

Gene sequence:

>2865_bases
GTGTATAGACGTTTCCTGCTCGTTGGGATGACGGCGCTCGCGCTCGCGGCGTGCAACAGCGATTCCGTCGATACGCCCGC
GCTCGGCGACACCCGCACGACGCTGCTTGCGACGGGCCAGTTGATTTCGCCCGCGGCCGCACCCGGTGCCGCGTTCGTGC
CGCTGAATCCGGGGCTTGCGGATGCGCCGGGTTACATCGCGGGCCAACCGGTTTCGGAGGCGCTCAGCCCCGACCGCAAG
ACGCTCCTCGTGCTGACGAGCGGCTACAACAACGTGCTCGACGCGAACGGCAAGATGATCAAGCCGGATTCGAACGAATA
CGTGTTCGTGTTCGACGTGTCCGGCGGCGCGCCCGTGCGCAAGCAGGTGCTGCAGGTGAGCGATACCTACGTCGGCATCG
CGTTCGCGCCGGACGGTCAGCATTTCTACGTGACGGGCGGCGGCGACGACAACCTGCATCGCTTCGCGTTCTCGCAGGGC
GCGTGGGGCGAGGTGGGCGCGCCGATCGCGCTGAATCACAAGGCGGGCAACGGCATCGGCAGCACGCCGCTTGCGACGGG
CGTCGACGTGACGGCGGACGGCAAGCGCGCGGTCGTCGCGAATCGCTACAACGATTCGATCACGCTCGTCGATCTCGGCG
CGGGCGCGGTGCTCGCCGAGCGCGATCTGCGGCCGGGCAAGAGCGGCGGCGCATCGGGCGCGCCGGGCGGCGAGTATCCG
AACGCGGTGCGCATCGTCGGCAACAAGACGGCTTATGTGTCGAGCGAGCGTGATCGCGAGATCGTCGTCGTCGATCTGTC
GACGAACGCGCCGCAGGTCGTCACGCGCATTCCCGTCAAGGGCAATCCGAACAAGATGGTGCTGAATGCCGCGCAGTCGC
GCCTGTACGTGGCGTCCGACAACGCGGACCTCGTGTCGGTGATCGATACGGCCGCGAACAAGGTGGTGTCCACCGTGTCG
ACGGTCGCGCCGGCGGGCCTCGTCACCGAGATGCAGTATCGCGGCGCGTCGCCGAACGGGCTCGCGCTATCGGCCGACGA
GCGCACGCTGTACGTGACGAACCGCGGCACGAACGACGTGGCGGTGATTTCGCTTGCCGGCGCGTCGCCCGCCGTCACCG
GCCTGATTCCGACCGGCTGGTATCCGTCCGACGTCGCGCTCGGCGCGACGAACGCGATGTACGTCGTCTACACGAAGAAC
ATGCCGGGGCCGAATCCGGGCAACTGCAAGGACAGCGGTCGCACGGTGCCGTGCCCGGTGAAGAACACGCCGGTGAAGCT
CGTCGAGAATCAGTACATCGAACAACTGAGCAAGGGCGGCCTGATGTGGATGCCGGCGCCCGGCAGCAAGACGCTCGACC
TGTTGACGACCCAGGTGGCGAACAACAACAGCTTCAACGCGGCGCTCACGCCGAACGACATCGCGACGATGGCCGCGCTG
CGCAAGAAGATCAAGCACGTGATCTATATCGTCAAGGAGAACCGCACGTACGACCAGATTCTCGGCGACATCGGCCGCGG
CAACAGCGATCCGTCGCTCGCGGAGTTTCCCGACGCGACGACGCCGAGCATGCACGCGCTCGCGAAGACGTTCGTCACGC
TCGACAACTTCTACGATTCCGGCGACGTGAGCGGCGACGGCTGGCCGTGGAGCACGGGCGCGCGCGAATCGGACGCGGGC
GCGAAGATGCTGCCCGTCAACTACGCGAACAGCCCCGCGCGCGCCGGCGCGCGCGGCGGCTCGTACGACTGGGAAGGCGC
GAACCGCAACGTCAACGTGGGCCTGACGGGCGCGCAACGCGCGGCCGCGAATCCGTCGCTGCCGTCCGATCCGGACCTGC
TACCCGGCAACGCCGACGTGTCGGCTCCCGACGGCCCGTCCGACGCGGTTCAGCAGGGCTACATCTGGAACGCCGCGCTG
CGCGCGGGGCTGACGGTGCGCAACTACGGCTTCTTCGCGGATCTCGCGCGCTACAGCGGCCCTGGCGCGATCGCGCCGGA
TCGCACGCCGTTCGTCGATCACGCGGTGCAAACCTATGCGACGAGCCCCGCGCTCGTCGATCGCACCGATCCGTATTTCC
GCGGCTATGACAACGCATATCCGGATTTCTATCGCGAACTCGAGTGGGAGCGCGAGTTCAACGGCTTCGTCGCGAACGGC
CAGATGCCGTCGCTCACGCTGCTGCGCCTGCCGCACGATCATACGGGTTCCTATTCGAGCGCGCTCGACGGCGTCAACAC
GCCGGAGATCCAGATGGCCGACAACGACTACGCGGTCGGCCGCGTCGCGCAGGCCGTCGCGAACAGCCCGTATGCGGCCG
ATACGCTGATCTTCGTCGTCGAGGACGACGCGCAGGACGGGCCCGATCACGTCGATGCGCATCGCAGCACGGCGTTCGTG
ATCGGGCCTTACGTGAAGCAGAACGCGGTCGTCAGCACGCACTACACGACGGTCAACATGATCCGCACGATCACCGAAGT
GCTCGGCCTCGATCACTTGGGGCTGTTCGACGCGACGCAAGGCCCGATGACCGACGTATTCGATCTGAACCAGTCGAAGT
GGAGCTTCAAGGCAGTGGCGTCCGGCTTGCTCGCGAACACGCAACTGCCGGTTCCGTCGGGCGACATCAAGACGGCGGCG
TTCAAGCCGACGCACGGGATGCGCTACTGGGCGCTCGCGACGCGCGGCATGGATTTCTCGGTCGAGGATCGGCTCGATGC
GGTTGCGTACAACAAGCTGCTGTGGAAGGGGTTGATGAGCGGGCGCGCGTACCCGGTGCGCGTCGGCGAGCGTGCGGCGC
CGCATCGTCGCGACGACGATGACGACGTGAAGGTGTCGCAGGCGAGGAGCGCGGCGCACGGATGA

Upstream 100 bases:

>100_bases
TCATCGGGTCACTCCCCGCCCTTAGGGTTCCTGTCTATTACCGATCGTTACAACGCCGGCGCCATCGAAGCGGCGTCGCG
CCTTCCTGAAGAGGTTCACC

Downstream 100 bases:

>100_bases
CGTAGCCGCGCGCCGGCTGCCGGCGCGCGGCCGTGTGCCGGCAGCCGGCGCGGGAAGGACGAGAGCGGATCGGCTGCTAG
CCGATCCGTTTTGCTTTTCG

Product: lipoprotein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Lipoprotein; Phosphoesterase; SMP-30/Gluconolaconase/LRE Domain Protein; WD40 Domain-Containing Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Surface Antigen Gene; Phosphoesterase Family Protein

Number of amino acids: Translated: 954; Mature: 954

Protein sequence:

>954_residues
MYRRFLLVGMTALALAACNSDSVDTPALGDTRTTLLATGQLISPAAAPGAAFVPLNPGLADAPGYIAGQPVSEALSPDRK
TLLVLTSGYNNVLDANGKMIKPDSNEYVFVFDVSGGAPVRKQVLQVSDTYVGIAFAPDGQHFYVTGGGDDNLHRFAFSQG
AWGEVGAPIALNHKAGNGIGSTPLATGVDVTADGKRAVVANRYNDSITLVDLGAGAVLAERDLRPGKSGGASGAPGGEYP
NAVRIVGNKTAYVSSERDREIVVVDLSTNAPQVVTRIPVKGNPNKMVLNAAQSRLYVASDNADLVSVIDTAANKVVSTVS
TVAPAGLVTEMQYRGASPNGLALSADERTLYVTNRGTNDVAVISLAGASPAVTGLIPTGWYPSDVALGATNAMYVVYTKN
MPGPNPGNCKDSGRTVPCPVKNTPVKLVENQYIEQLSKGGLMWMPAPGSKTLDLLTTQVANNNSFNAALTPNDIATMAAL
RKKIKHVIYIVKENRTYDQILGDIGRGNSDPSLAEFPDATTPSMHALAKTFVTLDNFYDSGDVSGDGWPWSTGARESDAG
AKMLPVNYANSPARAGARGGSYDWEGANRNVNVGLTGAQRAAANPSLPSDPDLLPGNADVSAPDGPSDAVQQGYIWNAAL
RAGLTVRNYGFFADLARYSGPGAIAPDRTPFVDHAVQTYATSPALVDRTDPYFRGYDNAYPDFYRELEWEREFNGFVANG
QMPSLTLLRLPHDHTGSYSSALDGVNTPEIQMADNDYAVGRVAQAVANSPYAADTLIFVVEDDAQDGPDHVDAHRSTAFV
IGPYVKQNAVVSTHYTTVNMIRTITEVLGLDHLGLFDATQGPMTDVFDLNQSKWSFKAVASGLLANTQLPVPSGDIKTAA
FKPTHGMRYWALATRGMDFSVEDRLDAVAYNKLLWKGLMSGRAYPVRVGERAAPHRRDDDDDVKVSQARSAAHG

Sequences:

>Translated_954_residues
MYRRFLLVGMTALALAACNSDSVDTPALGDTRTTLLATGQLISPAAAPGAAFVPLNPGLADAPGYIAGQPVSEALSPDRK
TLLVLTSGYNNVLDANGKMIKPDSNEYVFVFDVSGGAPVRKQVLQVSDTYVGIAFAPDGQHFYVTGGGDDNLHRFAFSQG
AWGEVGAPIALNHKAGNGIGSTPLATGVDVTADGKRAVVANRYNDSITLVDLGAGAVLAERDLRPGKSGGASGAPGGEYP
NAVRIVGNKTAYVSSERDREIVVVDLSTNAPQVVTRIPVKGNPNKMVLNAAQSRLYVASDNADLVSVIDTAANKVVSTVS
TVAPAGLVTEMQYRGASPNGLALSADERTLYVTNRGTNDVAVISLAGASPAVTGLIPTGWYPSDVALGATNAMYVVYTKN
MPGPNPGNCKDSGRTVPCPVKNTPVKLVENQYIEQLSKGGLMWMPAPGSKTLDLLTTQVANNNSFNAALTPNDIATMAAL
RKKIKHVIYIVKENRTYDQILGDIGRGNSDPSLAEFPDATTPSMHALAKTFVTLDNFYDSGDVSGDGWPWSTGARESDAG
AKMLPVNYANSPARAGARGGSYDWEGANRNVNVGLTGAQRAAANPSLPSDPDLLPGNADVSAPDGPSDAVQQGYIWNAAL
RAGLTVRNYGFFADLARYSGPGAIAPDRTPFVDHAVQTYATSPALVDRTDPYFRGYDNAYPDFYRELEWEREFNGFVANG
QMPSLTLLRLPHDHTGSYSSALDGVNTPEIQMADNDYAVGRVAQAVANSPYAADTLIFVVEDDAQDGPDHVDAHRSTAFV
IGPYVKQNAVVSTHYTTVNMIRTITEVLGLDHLGLFDATQGPMTDVFDLNQSKWSFKAVASGLLANTQLPVPSGDIKTAA
FKPTHGMRYWALATRGMDFSVEDRLDAVAYNKLLWKGLMSGRAYPVRVGERAAPHRRDDDDDVKVSQARSAAHG
>Mature_954_residues
MYRRFLLVGMTALALAACNSDSVDTPALGDTRTTLLATGQLISPAAAPGAAFVPLNPGLADAPGYIAGQPVSEALSPDRK
TLLVLTSGYNNVLDANGKMIKPDSNEYVFVFDVSGGAPVRKQVLQVSDTYVGIAFAPDGQHFYVTGGGDDNLHRFAFSQG
AWGEVGAPIALNHKAGNGIGSTPLATGVDVTADGKRAVVANRYNDSITLVDLGAGAVLAERDLRPGKSGGASGAPGGEYP
NAVRIVGNKTAYVSSERDREIVVVDLSTNAPQVVTRIPVKGNPNKMVLNAAQSRLYVASDNADLVSVIDTAANKVVSTVS
TVAPAGLVTEMQYRGASPNGLALSADERTLYVTNRGTNDVAVISLAGASPAVTGLIPTGWYPSDVALGATNAMYVVYTKN
MPGPNPGNCKDSGRTVPCPVKNTPVKLVENQYIEQLSKGGLMWMPAPGSKTLDLLTTQVANNNSFNAALTPNDIATMAAL
RKKIKHVIYIVKENRTYDQILGDIGRGNSDPSLAEFPDATTPSMHALAKTFVTLDNFYDSGDVSGDGWPWSTGARESDAG
AKMLPVNYANSPARAGARGGSYDWEGANRNVNVGLTGAQRAAANPSLPSDPDLLPGNADVSAPDGPSDAVQQGYIWNAAL
RAGLTVRNYGFFADLARYSGPGAIAPDRTPFVDHAVQTYATSPALVDRTDPYFRGYDNAYPDFYRELEWEREFNGFVANG
QMPSLTLLRLPHDHTGSYSSALDGVNTPEIQMADNDYAVGRVAQAVANSPYAADTLIFVVEDDAQDGPDHVDAHRSTAFV
IGPYVKQNAVVSTHYTTVNMIRTITEVLGLDHLGLFDATQGPMTDVFDLNQSKWSFKAVASGLLANTQLPVPSGDIKTAA
FKPTHGMRYWALATRGMDFSVEDRLDAVAYNKLLWKGLMSGRAYPVRVGERAAPHRRDDDDDVKVSQARSAAHG

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101112; Mature: 101112

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRRFLLVGMTALALAACNSDSVDTPALGDTRTTLLATGQLISPAAAPGAAFVPLNPGLA
CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCEEEEECCCCCC
DAPGYIAGQPVSEALSPDRKTLLVLTSGYNNVLDANGKMIKPDSNEYVFVFDVSGGAPVR
CCCCCCCCCCHHHHCCCCCEEEEEEECCCCCEECCCCCEECCCCCCEEEEEECCCCCHHH
KQVLQVSDTYVGIAFAPDGQHFYVTGGGDDNLHRFAFSQGAWGEVGAPIALNHKAGNGIG
HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCC
STPLATGVDVTADGKRAVVANRYNDSITLVDLGAGAVLAERDLRPGKSGGASGAPGGEYP
CCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
NAVRIVGNKTAYVSSERDREIVVVDLSTNAPQVVTRIPVKGNPNKMVLNAAQSRLYVASD
CEEEEEECCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEEC
NADLVSVIDTAANKVVSTVSTVAPAGLVTEMQYRGASPNGLALSADERTLYVTNRGTNDV
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCE
AVISLAGASPAVTGLIPTGWYPSDVALGATNAMYVVYTKNMPGPNPGNCKDSGRTVPCPV
EEEEECCCCCCEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEECCCC
KNTPVKLVENQYIEQLSKGGLMWMPAPGSKTLDLLTTQVANNNSFNAALTPNDIATMAAL
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHHH
RKKIKHVIYIVKENRTYDQILGDIGRGNSDPSLAEFPDATTPSMHALAKTFVTLDNFYDS
HHHHCEEEEEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCC
GDVSGDGWPWSTGARESDAGAKMLPVNYANSPARAGARGGSYDWEGANRNVNVGLTGAQR
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH
AAANPSLPSDPDLLPGNADVSAPDGPSDAVQQGYIWNAALRAGLTVRNYGFFADLARYSG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHHCCCEEECCCHHHHHHHHCC
PGAIAPDRTPFVDHAVQTYATSPALVDRTDPYFRGYDNAYPDFYRELEWEREFNGFVANG
CCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHCHHHCCCCEEECC
QMPSLTLLRLPHDHTGSYSSALDGVNTPEIQMADNDYAVGRVAQAVANSPYAADTLIFVV
CCCCEEEEECCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEE
EDDAQDGPDHVDAHRSTAFVIGPYVKQNAVVSTHYTTVNMIRTITEVLGLDHLGLFDATQ
ECCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC
GPMTDVFDLNQSKWSFKAVASGLLANTQLPVPSGDIKTAAFKPTHGMRYWALATRGMDFS
CCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCC
VEDRLDAVAYNKLLWKGLMSGRAYPVRVGERAAPHRRDDDDDVKVSQARSAAHG
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHCCCC
>Mature Secondary Structure
MYRRFLLVGMTALALAACNSDSVDTPALGDTRTTLLATGQLISPAAAPGAAFVPLNPGLA
CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCEEEEECCCCCC
DAPGYIAGQPVSEALSPDRKTLLVLTSGYNNVLDANGKMIKPDSNEYVFVFDVSGGAPVR
CCCCCCCCCCHHHHCCCCCEEEEEEECCCCCEECCCCCEECCCCCCEEEEEECCCCCHHH
KQVLQVSDTYVGIAFAPDGQHFYVTGGGDDNLHRFAFSQGAWGEVGAPIALNHKAGNGIG
HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCC
STPLATGVDVTADGKRAVVANRYNDSITLVDLGAGAVLAERDLRPGKSGGASGAPGGEYP
CCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
NAVRIVGNKTAYVSSERDREIVVVDLSTNAPQVVTRIPVKGNPNKMVLNAAQSRLYVASD
CEEEEEECCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCEEEEEEC
NADLVSVIDTAANKVVSTVSTVAPAGLVTEMQYRGASPNGLALSADERTLYVTNRGTNDV
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCE
AVISLAGASPAVTGLIPTGWYPSDVALGATNAMYVVYTKNMPGPNPGNCKDSGRTVPCPV
EEEEECCCCCCEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEECCCC
KNTPVKLVENQYIEQLSKGGLMWMPAPGSKTLDLLTTQVANNNSFNAALTPNDIATMAAL
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHHH
RKKIKHVIYIVKENRTYDQILGDIGRGNSDPSLAEFPDATTPSMHALAKTFVTLDNFYDS
HHHHCEEEEEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCC
GDVSGDGWPWSTGARESDAGAKMLPVNYANSPARAGARGGSYDWEGANRNVNVGLTGAQR
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH
AAANPSLPSDPDLLPGNADVSAPDGPSDAVQQGYIWNAALRAGLTVRNYGFFADLARYSG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHHCCCEEECCCHHHHHHHHCC
PGAIAPDRTPFVDHAVQTYATSPALVDRTDPYFRGYDNAYPDFYRELEWEREFNGFVANG
CCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHCHHHCCCCEEECC
QMPSLTLLRLPHDHTGSYSSALDGVNTPEIQMADNDYAVGRVAQAVANSPYAADTLIFVV
CCCCEEEEECCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEE
EDDAQDGPDHVDAHRSTAFVIGPYVKQNAVVSTHYTTVNMIRTITEVLGLDHLGLFDATQ
ECCCCCCCCHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC
GPMTDVFDLNQSKWSFKAVASGLLANTQLPVPSGDIKTAAFKPTHGMRYWALATRGMDFS
CCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCC
VEDRLDAVAYNKLLWKGLMSGRAYPVRVGERAAPHRRDDDDDVKVSQARSAAHG
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA