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The map label for this gene is amsH [H]

Identifier: 53722850

GI number: 53722850

Start: 2491078

End: 2492253

Strand: Reverse

Name: amsH [H]

Synonym: BPSS1831

Alternate gene names: 53722850

Gene position: 2492253-2491078 (Counterclockwise)

Preceding gene: 53722851

Following gene: 53722849

Centisome position: 78.55

GC content: 66.67

Gene sequence:

>1176_bases
ATGCTGAATCGTTCGCTTAGACCCCTGGCGCTCGCCGTCGCCGCCGCCACGCTGCTGCAGGCGTGCGCGACGGCGCCCGG
CAACTACCTCGACACGTCGCGTCTCGACGACAAGGACAGCCAGTCCGCCGAGCATTACAACGTGCAGCTCATTACCGCGC
AGCTCGTCGTTTCGCAGGCCGACGCGCAGCGCAAGGCTGGGCCGTTGCCGCCGGCGCGCTTCGTCGATCCGATGCAGTAC
GTCTACCGGATCGCGCCGCAGGACATTCTCGGCGTGACCGTCTGGGATCATCCGGAGCTCACGACGCCGCAAGGCCAATC
GTTCTCGAGCGGCGGCAACACGACGCAGACGGTCGCGGGCGCGCTGCAGCAGCCGTATGCGAATGCGTTGCCCGGCCAGG
CCGATCCGTACGGCCAGACGGTGATGTCCGACGGCACGATCTACTTTCCGTTCGTCGGCCGCCTGCACGCGGCGGGCAAG
ACGGTCGGCCAGGTGCGCGACGAACTCGCCGCGCGGCTGGCGCGTTACGTGAAGAATCCGCAGGTCGACGTGCGCGTGCT
GTCGTATCGCAGCCAGAAGGTGCAGGTGACCGGCGAAGTGAAGACGCCCGGCCCGCTTGCGATCACCGATGTGCCGCTCA
CGCTCGTGGACGCGATCACGCGCTCGGGCGGCTCGACGAACGAGGCCGACCTGCAGCGCGTGCGCCTCACGCGCGACGGC
AAGTTCTACCAACTCGACGCGAACGGCATGCTCGATCGCGGCGACGTCACGCAGAACGTGATGCTGCAGCCGGGCGACAT
CGTCAACGTGCCGGACCGCGGCGACAGCCGCGTGTTCGTGATGGGCGAGGTGAAGACGCCCGCGACGGTGCCGATGCTCA
AGGGGCGCTTGACGATCGCGGACGCGCTCACGGCGGGAGGCGGCATTCTCGATACCGATGCGAATCCGCGTCAGGTGTAC
GTGTTGCGCGATCTGCAGGACAAGCCGAACACACCGGACATCTTCCGCCTCGACATGACGCAGCCCGACGCGCTGATGCT
GTCGAGCCGCTTCCAGTTGAAGCCGCTCGACGTCGTGTACGTCGGCACGGCGGGATCGGTGCGCTTCAACCGCCTGCTGC
AGCAGATTTTCCCGACGATCCAGTCGATTTACTACATGAAGCAGATCACGCGCTGA

Upstream 100 bases:

>100_bases
AGGACGCGGAGATCGCCGATCCGCACGGCGGTCCCGAGGCCGATTATCGGGAGAGCTACACATTGATCGAACGTCTCGTT
CAAGGATGGCTGCAAAAGAT

Downstream 100 bases:

>100_bases
TCGGTCCCGGGCCGCCGCGCGCGGCCCGCCTCAACCTCAAGCGGGAATGCATGGTGAATACGCAAGCGAAACATCCTTAT
GCCGACCTCGCGGTGAAGAC

Product: exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLNRSLRPLALAVAAATLLQACATAPGNYLDTSRLDDKDSQSAEHYNVQLITAQLVVSQADAQRKAGPLPPARFVDPMQY
VYRIAPQDILGVTVWDHPELTTPQGQSFSSGGNTTQTVAGALQQPYANALPGQADPYGQTVMSDGTIYFPFVGRLHAAGK
TVGQVRDELAARLARYVKNPQVDVRVLSYRSQKVQVTGEVKTPGPLAITDVPLTLVDAITRSGGSTNEADLQRVRLTRDG
KFYQLDANGMLDRGDVTQNVMLQPGDIVNVPDRGDSRVFVMGEVKTPATVPMLKGRLTIADALTAGGGILDTDANPRQVY
VLRDLQDKPNTPDIFRLDMTQPDALMLSSRFQLKPLDVVYVGTAGSVRFNRLLQQIFPTIQSIYYMKQITR

Sequences:

>Translated_391_residues
MLNRSLRPLALAVAAATLLQACATAPGNYLDTSRLDDKDSQSAEHYNVQLITAQLVVSQADAQRKAGPLPPARFVDPMQY
VYRIAPQDILGVTVWDHPELTTPQGQSFSSGGNTTQTVAGALQQPYANALPGQADPYGQTVMSDGTIYFPFVGRLHAAGK
TVGQVRDELAARLARYVKNPQVDVRVLSYRSQKVQVTGEVKTPGPLAITDVPLTLVDAITRSGGSTNEADLQRVRLTRDG
KFYQLDANGMLDRGDVTQNVMLQPGDIVNVPDRGDSRVFVMGEVKTPATVPMLKGRLTIADALTAGGGILDTDANPRQVY
VLRDLQDKPNTPDIFRLDMTQPDALMLSSRFQLKPLDVVYVGTAGSVRFNRLLQQIFPTIQSIYYMKQITR
>Mature_391_residues
MLNRSLRPLALAVAAATLLQACATAPGNYLDTSRLDDKDSQSAEHYNVQLITAQLVVSQADAQRKAGPLPPARFVDPMQY
VYRIAPQDILGVTVWDHPELTTPQGQSFSSGGNTTQTVAGALQQPYANALPGQADPYGQTVMSDGTIYFPFVGRLHAAGK
TVGQVRDELAARLARYVKNPQVDVRVLSYRSQKVQVTGEVKTPGPLAITDVPLTLVDAITRSGGSTNEADLQRVRLTRDG
KFYQLDANGMLDRGDVTQNVMLQPGDIVNVPDRGDSRVFVMGEVKTPATVPMLKGRLTIADALTAGGGILDTDANPRQVY
VLRDLQDKPNTPDIFRLDMTQPDALMLSSRFQLKPLDVVYVGTAGSVRFNRLLQQIFPTIQSIYYMKQITR

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. Might be involved in the translocation of polysaccharides across the outer membrane [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=390, Percent_Identity=37.1794871794872, Blast_Score=251, Evalue=6e-68,
Organism=Escherichia coli, GI1787218, Length=397, Percent_Identity=36.5239294710327, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 42656; Mature: 42656

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRSLRPLALAVAAATLLQACATAPGNYLDTSRLDDKDSQSAEHYNVQLITAQLVVSQA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHH
DAQRKAGPLPPARFVDPMQYVYRIAPQDILGVTVWDHPELTTPQGQSFSSGGNTTQTVAG
HHHHHCCCCCCHHHCCHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
ALQQPYANALPGQADPYGQTVMSDGTIYFPFVGRLHAAGKTVGQVRDELAARLARYVKNP
HHHCCHHHCCCCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QVDVRVLSYRSQKVQVTGEVKTPGPLAITDVPLTLVDAITRSGGSTNEADLQRVRLTRDG
CCEEEEEEECCCEEEEEEECCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHEEEECCC
KFYQLDANGMLDRGDVTQNVMLQPGDIVNVPDRGDSRVFVMGEVKTPATVPMLKGRLTIA
CEEEECCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEEEECCCCCCCCHHHCCCEEEE
DALTAGGGILDTDANPRQVYVLRDLQDKPNTPDIFRLDMTQPDALMLSSRFQLKPLDVVY
HHHHCCCCEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEE
VGTAGSVRFNRLLQQIFPTIQSIYYMKQITR
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNRSLRPLALAVAAATLLQACATAPGNYLDTSRLDDKDSQSAEHYNVQLITAQLVVSQA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHH
DAQRKAGPLPPARFVDPMQYVYRIAPQDILGVTVWDHPELTTPQGQSFSSGGNTTQTVAG
HHHHHCCCCCCHHHCCHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
ALQQPYANALPGQADPYGQTVMSDGTIYFPFVGRLHAAGKTVGQVRDELAARLARYVKNP
HHHCCHHHCCCCCCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QVDVRVLSYRSQKVQVTGEVKTPGPLAITDVPLTLVDAITRSGGSTNEADLQRVRLTRDG
CCEEEEEEECCCEEEEEEECCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHEEEECCC
KFYQLDANGMLDRGDVTQNVMLQPGDIVNVPDRGDSRVFVMGEVKTPATVPMLKGRLTIA
CEEEECCCCCCCCCCCCCCEEECCCCEEECCCCCCCEEEEEECCCCCCCCHHHCCCEEEE
DALTAGGGILDTDANPRQVYVLRDLQDKPNTPDIFRLDMTQPDALMLSSRFQLKPLDVVY
HHHHCCCCEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEE
VGTAGSVRFNRLLQQIFPTIQSIYYMKQITR
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]