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The map label for this gene is ptp [H]

Identifier: 53722851

GI number: 53722851

Start: 2492247

End: 2492681

Strand: Reverse

Name: ptp [H]

Synonym: BPSS1832

Alternate gene names: 53722851

Gene position: 2492681-2492247 (Counterclockwise)

Preceding gene: 53722852

Following gene: 53722850

Centisome position: 78.56

GC content: 66.21

Gene sequence:

>435_bases
ATGTTTCGCAACATTCTGATCGTATGCCGCGCGAACGTGTGCCGCAGCCCGGCCGCGGAGCTGCTGTTCAGGTCGATGGC
GCCGCGCGCGTCGCTTGCATTCCATTCGGCGGGCATCGACGCGAACGACGGCGACGACATCGATCCGACGATGTCGCGCC
TGCTCGCGGAGCGCGGCGTCGACGCGGCGCCGCACCGTTCGCGGCGGCTGAGCCGCGCGCTCGTGCGCGCCGCGGATCTC
GTGCTCGTCACCGAGCGCCGGCAAATCACCGAAGTCGAGGCGATCGATCCGTTCGCGCGCGGCAAGGTGCATCTGCTCGG
CAAATGGGAGGACGCGGAGATCGCCGATCCGCACGGCGGTCCCGAGGCCGATTATCGGGAGAGCTACACATTGATCGAAC
GTCTCGTTCAAGGATGGCTGCAAAAGATATGCTGA

Upstream 100 bases:

>100_bases
ATCGGGCGGCCCGGCGCGGCGCCGCGCACGGCGGCGGGCGAGTCCGACGCCGCTCGCGCCGCGCGCGCCGGCGCGTGAGC
GGGCCGCCACGGGTTCGAGC

Downstream 100 bases:

>100_bases
ATCGTTCGCTTAGACCCCTGGCGCTCGCCGTCGCCGCCGCCACGCTGCTGCAGGCGTGCGCGACGGCGCCCGGCAACTAC
CTCGACACGTCGCGTCTCGA

Product: exopolysaccharide (EPS) biosynthesis related low molecular weight protein-tyrosine-phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFRNILIVCRANVCRSPAAELLFRSMAPRASLAFHSAGIDANDGDDIDPTMSRLLAERGVDAAPHRSRRLSRALVRAADL
VLVTERRQITEVEAIDPFARGKVHLLGKWEDAEIADPHGGPEADYRESYTLIERLVQGWLQKIC

Sequences:

>Translated_144_residues
MFRNILIVCRANVCRSPAAELLFRSMAPRASLAFHSAGIDANDGDDIDPTMSRLLAERGVDAAPHRSRRLSRALVRAADL
VLVTERRQITEVEAIDPFARGKVHLLGKWEDAEIADPHGGPEADYRESYTLIERLVQGWLQKIC
>Mature_144_residues
MFRNILIVCRANVCRSPAAELLFRSMAPRASLAFHSAGIDANDGDDIDPTMSRLLAERGVDAAPHRSRRLSRALVRAADL
VLVTERRQITEVEAIDPFARGKVHLLGKWEDAEIADPHGGPEADYRESYTLIERLVQGWLQKIC

Specific function: Dephosphorylates ptk. May be involved in the production and the transport of exopolysaccharides [H]

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Escherichia coli, GI1788375, Length=144, Percent_Identity=40.2777777777778, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI87081812, Length=143, Percent_Identity=35.6643356643357, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 16077; Mature: 16077

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNILIVCRANVCRSPAAELLFRSMAPRASLAFHSAGIDANDGDDIDPTMSRLLAERGV
CCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
DAAPHRSRRLSRALVRAADLVLVTERRQITEVEAIDPFARGKVHLLGKWEDAEIADPHGG
CCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC
PEADYRESYTLIERLVQGWLQKIC
CCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRNILIVCRANVCRSPAAELLFRSMAPRASLAFHSAGIDANDGDDIDPTMSRLLAERGV
CCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
DAAPHRSRRLSRALVRAADLVLVTERRQITEVEAIDPFARGKVHLLGKWEDAEIADPHGG
CCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC
PEADYRESYTLIERLVQGWLQKIC
CCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9434192; 9571056 [H]