| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is dlpA [H]
Identifier: 53722830
GI number: 53722830
Start: 2469953
End: 2470636
Strand: Reverse
Name: dlpA [H]
Synonym: BPSS1811
Alternate gene names: 53722830
Gene position: 2470636-2469953 (Counterclockwise)
Preceding gene: 53722831
Following gene: 53722829
Centisome position: 77.86
GC content: 68.27
Gene sequence:
>684_bases ATGGCGCAGTGGAATTCGGATGACGAGCTGTTCGCGCTGATGCGCGCCGAGCTCTCGACCTGTCCCGTCAGCGACGTGAT GGAGGTGCTCGGGTTTGCCTACCCGATGCTGCCGCCGGAGATCCGGCCGTTGCGGCGGGACATGGTGATGATCGGCCGCG CGATGCCGGTGCAGGACGAGCCGCCCGTGCCGCACGGCGGCCTCAAGCGCTACGACGCGAAGCCGTTCGGACTGCTGTTC GAATCGGTCGAGGCGCTGCGCCCAGGCGAAGTCTACATCGCGAGCGGCGGCCCGACGGCGGTTGCGCGGCTCGGCGACCT GCTCGTCACGCGCGCGCGCAATCTGGGCGCGGCGGGCGTCGTGCTCCACGCGCACGTCCGCGACGCGAACGCGATTCTCG ACCTGAACCTGCCGGCGTTCGCGCACGGTACGTATGCGTACGGGCTGCAGGGCCGCCACAACGTCGTCGACTATCGCTGC TCGATCACCGTCGGCCACGTGCGAATTCGTCCGGGCGATCTGATTTTCGGCGACGGCGACGGGGTCTGCGTGATTCCGCG CGAGGCGGAGCGGGAGGTGATCACGCGCGCGATCGCGAAGAACCGGCTCGAGCGCAAGGTACGCGGCGCGATCGCAGAGG GGCGCAGCGTCGTCGAGGCATTCAATCAATACAACGTCATGTGA
Upstream 100 bases:
>100_bases TTCATTCACGACGAAGAGGCGTCGGTGCTCGACCACATCAACCGCGAGCTCGAGCCGCTTTTGAGCGACGCGAGCTCCAC TCTAATCGGATGACAGACAA
Downstream 100 bases:
>100_bases GGAGCGCAACAACGATGAAATCGAGCTACGTGTGGAAGAACGGTGAACTGGTGCCGTGGGAGCATGCGCAGGTGCATGTG ATGAGCCATGCGCTGCATTA
Product: transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MAQWNSDDELFALMRAELSTCPVSDVMEVLGFAYPMLPPEIRPLRRDMVMIGRAMPVQDEPPVPHGGLKRYDAKPFGLLF ESVEALRPGEVYIASGGPTAVARLGDLLVTRARNLGAAGVVLHAHVRDANAILDLNLPAFAHGTYAYGLQGRHNVVDYRC SITVGHVRIRPGDLIFGDGDGVCVIPREAEREVITRAIAKNRLERKVRGAIAEGRSVVEAFNQYNVM
Sequences:
>Translated_227_residues MAQWNSDDELFALMRAELSTCPVSDVMEVLGFAYPMLPPEIRPLRRDMVMIGRAMPVQDEPPVPHGGLKRYDAKPFGLLF ESVEALRPGEVYIASGGPTAVARLGDLLVTRARNLGAAGVVLHAHVRDANAILDLNLPAFAHGTYAYGLQGRHNVVDYRC SITVGHVRIRPGDLIFGDGDGVCVIPREAEREVITRAIAKNRLERKVRGAIAEGRSVVEAFNQYNVM >Mature_226_residues AQWNSDDELFALMRAELSTCPVSDVMEVLGFAYPMLPPEIRPLRRDMVMIGRAMPVQDEPPVPHGGLKRYDAKPFGLLFE SVEALRPGEVYIASGGPTAVARLGDLLVTRARNLGAAGVVLHAHVRDANAILDLNLPAFAHGTYAYGLQGRHNVVDYRCS ITVGHVRIRPGDLIFGDGDGVCVIPREAEREVITRAIAKNRLERKVRGAIAEGRSVVEAFNQYNVM
Specific function: Unknown
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0644 in the C-terminal section [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019818 - InterPro: IPR001804 - InterPro: IPR005493 [H]
Pfam domain/function: PF00180 Iso_dh; PF03737 Methyltransf_6 [H]
EC number: NA
Molecular weight: Translated: 24885; Mature: 24754
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQWNSDDELFALMRAELSTCPVSDVMEVLGFAYPMLPPEIRPLRRDMVMIGRAMPVQDE CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC PPVPHGGLKRYDAKPFGLLFESVEALRPGEVYIASGGPTAVARLGDLLVTRARNLGAAGV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEE VLHAHVRDANAILDLNLPAFAHGTYAYGLQGRHNVVDYRCSITVGHVRIRPGDLIFGDGD EEEEEECCCCEEEEECCCCEECCCEEECCCCCCCEEEEEEEEEEEEEEECCCCEEEECCC GVCVIPREAEREVITRAIAKNRLERKVRGAIAEGRSVVEAFNQYNVM CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQWNSDDELFALMRAELSTCPVSDVMEVLGFAYPMLPPEIRPLRRDMVMIGRAMPVQDE CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC PPVPHGGLKRYDAKPFGLLFESVEALRPGEVYIASGGPTAVARLGDLLVTRARNLGAAGV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEE VLHAHVRDANAILDLNLPAFAHGTYAYGLQGRHNVVDYRCSITVGHVRIRPGDLIFGDGD EEEEEECCCCEEEEECCCCEECCCEEECCCCCCCEEEEEEEEEEEEEEECCCCEEEECCC GVCVIPREAEREVITRAIAKNRLERKVRGAIAEGRSVVEAFNQYNVM CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7891566 [H]