Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is 53721515

Identifier: 53721515

GI number: 53721515

Start: 648273

End: 648719

Strand: Reverse

Name: 53721515

Synonym: BPSS0478

Alternate gene names: NA

Gene position: 648719-648273 (Counterclockwise)

Preceding gene: 53721527

Following gene: 53721507

Centisome position: 20.44

GC content: 65.55

Gene sequence:

>447_bases
ATGCAAGGTTTCAAGAGAAAAATCGTCTATGTCGCATGCTTCGAGCTGATCGCGATCGCGATCACCACGACCGGATTCGC
GCTGCTCACCGGCCAGGCGCCGGCGCACGCGAGCATCGCGGCCGTCGCCTCCTCGGCGATCGCGGTGGTCTGGAATCTCG
TGTACAACACCGCGTTCGAATGGTGGGAAGCCCGCCAGAGCCGACGGGGGCGCGGCTTGCTGCGGCGCATCGCGCATGCG
GCCGGTTTCGAAGCCGGGCTGGTCGTCATGCTGGTGCCGCTATTCGCGTGGTGGCTGGACGTTTCGCTGTGGCAGGCGTT
CGTCCTCGATCTCGGCCTGATCGCCTTCTTCCTCGCGTACACGTTCGCGTTCAATCTCGCCTTCGACCGTGTGTTCGGGC
TGCCGGCATCGGCGCAGCCCGCGCCTTCGGAAGCTTCGCCGGGCTGA

Upstream 100 bases:

>100_bases
GTATCCTCTGTGTCGATCGTTTCGTCGGATCATTCGCGTCGACCTCGACGCCCCCTCCACGTCAACCGCGGCTCGGCCGG
CGCCGGCTTCGCACTCCGCC

Downstream 100 bases:

>100_bases
GCGCGTGCGGCCGGGCGGCGCGGGCGCGGCCGCGCGCGTCAGCCCCGGCGCGAGGAGGCGCTCAGAAATCGAAGCCCGGG
CCGCCCGCGCCCGGCACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Transmembrane Pair Protein; Transmembrane Protein; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family Protein

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MQGFKRKIVYVACFELIAIAITTTGFALLTGQAPAHASIAAVASSAIAVVWNLVYNTAFEWWEARQSRRGRGLLRRIAHA
AGFEAGLVVMLVPLFAWWLDVSLWQAFVLDLGLIAFFLAYTFAFNLAFDRVFGLPASAQPAPSEASPG

Sequences:

>Translated_148_residues
MQGFKRKIVYVACFELIAIAITTTGFALLTGQAPAHASIAAVASSAIAVVWNLVYNTAFEWWEARQSRRGRGLLRRIAHA
AGFEAGLVVMLVPLFAWWLDVSLWQAFVLDLGLIAFFLAYTFAFNLAFDRVFGLPASAQPAPSEASPG
>Mature_148_residues
MQGFKRKIVYVACFELIAIAITTTGFALLTGQAPAHASIAAVASSAIAVVWNLVYNTAFEWWEARQSRRGRGLLRRIAHA
AGFEAGLVVMLVPLFAWWLDVSLWQAFVLDLGLIAFFLAYTFAFNLAFDRVFGLPASAQPAPSEASPG

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16123; Mature: 16123

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGFKRKIVYVACFELIAIAITTTGFALLTGQAPAHASIAAVASSAIAVVWNLVYNTAFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WWEARQSRRGRGLLRRIAHAAGFEAGLVVMLVPLFAWWLDVSLWQAFVLDLGLIAFFLAY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAFNLAFDRVFGLPASAQPAPSEASPG
HHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGFKRKIVYVACFELIAIAITTTGFALLTGQAPAHASIAAVASSAIAVVWNLVYNTAFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WWEARQSRRGRGLLRRIAHAAGFEAGLVVMLVPLFAWWLDVSLWQAFVLDLGLIAFFLAY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFAFNLAFDRVFGLPASAQPAPSEASPG
HHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA