| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721245
Identifier: 53721245
GI number: 53721245
Start: 284611
End: 285054
Strand: Reverse
Name: 53721245
Synonym: BPSS0210
Alternate gene names: NA
Gene position: 285054-284611 (Counterclockwise)
Preceding gene: 53721251
Following gene: 53721240
Centisome position: 8.98
GC content: 67.34
Gene sequence:
>444_bases ATGACCGACATCGTGGACCATGCGCGCGGCGCCCTGCGCGCGCAACCCTTCAGCATGCTGCTCGGCACCGAGCTCGTGCA TATCGGCGGCGAAGAGGCGTCGCTGCGCCTGCCGATTCGCGACGAGCTCAGGCAGCAGTACGGCTTCGTCCACGGCGGCG TCATCAGCTATCTCGCGGACAACGCGCTCACGTTCGCGGGCGCGCTCGCGCTCGGGCCGCGCGTCGTCACGGGGGAATAC AAGATCAATTACCTGCGCCCGGCCGTCGTCGGCACGCTGATTGCGCGCGCGAAGCTGATTTATGCGGGACGGAATCAGGC GACCTGCCAATGCCATGTGTTCGTGATCGACGGCGATCACGAGCGGCTCGTCGCGGTCGCGCAGGGCACGATCAATCGGG TCGGCGACGGGCGCGAGCCGGGCGCGGCCGAAGAAAAGGCATAA
Upstream 100 bases:
>100_bases CTTTCTAGAGTGGAGCGCAAAGAGCCGGATTGCATCGGCGGCGCGCGCACCGCGCCGCATTGTTCAACGTATCCATTCAA TCGATAGCGAAGGAACGTCG
Downstream 100 bases:
>100_bases CGCGGCGGCAAGGCCGCCGCACGCCCGATCGCCGCGCCCCGCGCCCGCGGCGTCAGAACGCGTCGCCCGGCACGCGCACC CAGCCCTCCATCAGCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase; Phenylacetic Acid Degradation Protein PaaI; Thioesterase Family Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; Domain 1 Protein; Phenylacetic Acid Degradation Protein PaaD; Phenylacetic Acid Degradation Protein PAAI
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTDIVDHARGALRAQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGPRVVTGEY KINYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINRVGDGREPGAAEEKA
Sequences:
>Translated_147_residues MTDIVDHARGALRAQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGPRVVTGEY KINYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINRVGDGREPGAAEEKA >Mature_146_residues TDIVDHARGALRAQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGPRVVTGEYK INYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINRVGDGREPGAAEEKA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15808; Mature: 15677
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIVDHARGALRAQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLAD CCCHHHHHCCCCCCCCHHHHHCCEEEEECCCCCEEECCHHHHHHHHHCCCCCHHHHHHHH NALTFAGALALGPRVVTGEYKINYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDH HHHHHHHHHHCCCEEEECCEEEEEECHHHHHHHHHHHHEEEECCCCCEEEEEEEEEECCC ERLVAVAQGTINRVGDGREPGAAEEKA CEEEEEECCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure TDIVDHARGALRAQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLAD CCHHHHHCCCCCCCCHHHHHCCEEEEECCCCCEEECCHHHHHHHHHCCCCCHHHHHHHH NALTFAGALALGPRVVTGEYKINYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDH HHHHHHHHHHCCCEEEECCEEEEEECHHHHHHHHHHHHEEEECCCCCEEEEEEEEEECCC ERLVAVAQGTINRVGDGREPGAAEEKA CEEEEEECCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA