Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719596

Identifier: 53719596

GI number: 53719596

Start: 2366590

End: 2367936

Strand: Reverse

Name: 53719596

Synonym: BPSL1984

Alternate gene names: NA

Gene position: 2367936-2366590 (Counterclockwise)

Preceding gene: 53719597

Following gene: 53719595

Centisome position: 58.12

GC content: 70.82

Gene sequence:

>1347_bases
GTGACGAAGTACGTGCTGACGGCATGCTGTGCCGCAGCGACGGCGCTCGCGGCGCAGCACGCCGCCGCGCAGTCGGCTAA
GAACCGGTCGGTGGCGACCGTCGACTACACGACGCGCAGCGGCGACACGCTGTACGACGTCTCGGCCCGCTATCTGCAAG
GCACGGACGACTGGCCGCTCGTCGCGCAACTGAACGACGTGCCGGTGCCGAAGCATCTGCAGCCGGGCGTCGTGCTGAAG
CTGCCCGCCGCGCGGCTGCGCAAGGAGCGGCTGTCGGCGCGGGTGATCGCCGCGCACGGCACGGTCGAGAGCGCGGGGCG
CGGCTCCGCGCAGTTCGCGCCCGTCGCCGTCGACGCGACGCTCACGGAAGGCGACCGCCTGCGCACGGGCTCGAACGCGT
TCGTCACGCTCGAGCTCTCGGACGGCACGCACCTGAGCCTGCCGCCCGACAGCCAGATCGATCTCGCGACACTGCGTCGC
ACGGTGCTCACGGGCACGCTCGAGCGCGTGATCGATCTGCGCCGCGGCTCGGTCGACAGCGAAGTCACCCATCTGAAGAA
GAAGGACGATCGCTTCCAGATCCGCTCGCCGTCGGTCGTCGCCGGCGTGCGCGGCACGCGCTTTCGCGTGAATTACGACA
AGGATGGCCGCGCGTCGACGACGGTCGAAGTGCTCGACGGCACGGTGGGCGTCGCGCCGAGCGCGAAGCGCTCGGCCGAC
ACGCTCGTGCACGCGAACTTCGGCAACGTGACGAGCGCGAGCGGCGTCGTCGGCAGCCCGATCGCGCTGCTCGACGCGCC
GCAGCTCGCCAACCCGGCGAAGATCCAGGACGATCCGCAGGTCGCGTTCGACCTCGTGCCGCTCGGCGGCGCGCAAAGCT
ATCACGTGCAGATCGCGCGCGACGCGGGCCTGTACGATCTCTTCAAGGAAGTGCAGGTGCCGGCGCCGCGCGCGACGTTC
GCCGACGTGCCGGACGGCACCTATTTCGTCCGGATCGCGGCGATCGATTCGCACGGTCTCGAGGGCCAGCCGCGCATCTA
CGCGTTCGAGCGGCGCCGCTTCGGGGTCGACGCGTCGGCCGCGCCCGCCGACGGCGGCTACGCGTTCCGCTGGTCGACGA
CGCAAGACGGCGCGGCGGCCGGCGCGACGCGCTTTCGCTTCGTGCTGTCGCGCTCGAAGGACCTGAGCAACCCGATCGTC
GACCAGGTCGACGCGCAGGGCGGGCGCATCGCCGTGTCGAACCTGACGCCGGGCGACTACTACTGGAGCGTGATCGCGGA
GCGCTACGAAGGCGGCCGTTTCCACGAAAAGGCCAGCGCGGTCAACGCGTTCACGATCGCGCGCTGA

Upstream 100 bases:

>100_bases
TGCGCCCGGAGAACGGCTACCGCCTCGCGCCGATCTACGGCTACGGCTATCGCCTCGAGCGCGTGATGCAGGGGGACGCG
GAGTGAGCGCGCGCGGGTTC

Downstream 100 bases:

>100_bases
TGGGCGGCGGATGAGATTCGACCGCACGCAACGGCGGCGGCTGCTCGGCCGCCGTTTTCTCGTCGAGTGGATCGCGATCG
GCTGCCTCGGGGTCGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPLVAQLNDVPVPKHLQPGVVLK
LPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRR
TVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPSAKRSAD
TLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIARDAGLYDLFKEVQVPAPRATF
ADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIV
DQVDAQGGRIAVSNLTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR

Sequences:

>Translated_448_residues
MTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPLVAQLNDVPVPKHLQPGVVLK
LPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRR
TVLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPSAKRSAD
TLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIARDAGLYDLFKEVQVPAPRATF
ADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIV
DQVDAQGGRIAVSNLTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR
>Mature_447_residues
TKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPLVAQLNDVPVPKHLQPGVVLKL
PAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDATLTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRRT
VLTGTLERVIDLRRGSVDSEVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPSAKRSADT
LVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIARDAGLYDLFKEVQVPAPRATFA
DVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASAAPADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIVD
QVDAQGGRIAVSNLTPGDYYWSVIAERYEGGRFHEKASAVNAFTIAR

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47918; Mature: 47787

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCHHEECCCCCCCE
VAQLNDVPVPKHLQPGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDAT
EEECCCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEEEEEE
LTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRRTVLTGTLERVIDLRRGSVDS
ECCCCCEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
EVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPSAKRSAD
HHHHHHCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC
TLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIAR
EEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC
DAGLYDLFKEVQVPAPRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASA
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECHHCCCCCCC
APADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIVDQVDAQGGRIAVSNLTPGDY
CCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCHH
YWSVIAERYEGGRFHEKASAVNAFTIAR
HHHHHHHHHCCCCHHHHHHHCCEEEECC
>Mature Secondary Structure 
TKYVLTACCAAATALAAQHAAAQSAKNRSVATVDYTTRSGDTLYDVSARYLQGTDDWPL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCHHEECCCCCCCE
VAQLNDVPVPKHLQPGVVLKLPAARLRKERLSARVIAAHGTVESAGRGSAQFAPVAVDAT
EEECCCCCCCCCCCCCEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEEEEEE
LTEGDRLRTGSNAFVTLELSDGTHLSLPPDSQIDLATLRRTVLTGTLERVIDLRRGSVDS
ECCCCCEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
EVTHLKKKDDRFQIRSPSVVAGVRGTRFRVNYDKDGRASTTVEVLDGTVGVAPSAKRSAD
HHHHHHCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC
TLVHANFGNVTSASGVVGSPIALLDAPQLANPAKIQDDPQVAFDLVPLGGAQSYHVQIAR
EEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC
DAGLYDLFKEVQVPAPRATFADVPDGTYFVRIAAIDSHGLEGQPRIYAFERRRFGVDASA
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECHHCCCCCCC
APADGGYAFRWSTTQDGAAAGATRFRFVLSRSKDLSNPIVDQVDAQGGRIAVSNLTPGDY
CCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCHH
YWSVIAERYEGGRFHEKASAVNAFTIAR
HHHHHHHHHCCCCHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA