| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yycG [H]
Identifier: 53719595
GI number: 53719595
Start: 2364186
End: 2366579
Strand: Reverse
Name: yycG [H]
Synonym: BPSL1983
Alternate gene names: 53719595
Gene position: 2366579-2364186 (Counterclockwise)
Preceding gene: 53719596
Following gene: 53719594
Centisome position: 58.08
GC content: 69.26
Gene sequence:
>2394_bases ATGAGATTCGACCGCACGCAACGGCGGCGGCTGCTCGGCCGCCGTTTTCTCGTCGAGTGGATCGCGATCGGCTGCCTCGG GGTCGCGGTGATTCTCGCCGGCGTCGCCGGCCGGATGACGGCGAGCGTCGACCGGATCATCTACGATCGCCTGCTCACGC TGCGCAAGCTGCCGATCGAGTCGAACATCGTGATCGTCGAGATCGACAATCGCAGCCTCGACACGCTCGGGCGCTGGCCA TGGCAGCGCAGCGTCCATGCGGAATTCCTCGGCGCGCTCGCGAAGACGCATCCGGCGGCCGTCGTCTACGACGTGCTGTT TACCGAGCCGTCCGCCGACGACCGCGCGCTCGCGAAGGTGCTCGATCTCGTGCCGACGTTCCTGCCCGTGCTGCTGAGCC CGGAGGAGCCCGACGGCACGCGCACCGTCAATCCGCCCGTGCCGGTGCTCGCGCAGCACGTCGCGGGCGCGGGCCACATC AATCTCGAAGTCGATCCGGACGGCATCGTGCGCAGCGTCGCGCTGTTCGAGAGCGACGGGCTGCACCGCTGGCCGCAGTT GATGGTGCCCGTGTTCCACGCGCTCGAGAACGGCCAGTTCAAGCTCGCGCAGCCCGCGCCGATCGCGCGGCGCGCGCACG ACATCGCGCAGGACGACAACGGCGAGTCGCGCTATTTCGTCCCGTTCAGCCGCGCGTCGCAGAACTACCCGGCGATTTCG TTCGTCGACGTGCTCGCGGGCCGCGTGAACGCCGACGAGCTGCGCGGCAAGATCGTGATCGTCGGCGCGACCGCGTCGGG CCTCTACGACCGCTTCGCGACGCCGATCTCGGGCGAGTTCGGGCCGCTGCCGGGCGTGTACATCCATGCGAGTGTGCTCG ATACGCTGATGACGGGCCGCGCGATCTCGCCCGTGTCCGGCTGGCTCGTGTTCAGCGCGTCGCTGCTGCCGCTCGTCGTG CTGCTCGCGGGCTTCCTGATGCTCTCGCCGTGGCGCTCGCTGCTCCTCACGCTGAGCCTTGCCGCGCTCGCGGTCGCCTC GAGCGCGGCGCTCCTCTACGAGGCGCGGCTGTGGCTGTCGCCCGCGCCGGCGATCTTCGGGCTGATCGCCGCGTACCCGA TCTGGAACTGGCGGCGCCTCGAGATGACGATGTCGTACCTGCGCTACGAGCTGCAGCGCCTCGCCGACGAGCCGCACCTG CTGCCCGAGGCGCCGCGCGAGCGCAACGAATTCGGCGGCGACGTGCTCGAGCGTCAGATGGCGCTGATGGCGCAGGCCGC GCAGCGCGTGCAGGACATGAAGCGCTTCGTCTGGGACAGCCTCGACAGCATGCCGGAGCCCGTCGTCGTGACCGATCTCG CGGGCACGGTGCTGATCGCCAATCATGCGGCGAAGCGCTACTGCGCGCGGCTAGACGCTCCCGCGCCGGAAGGGCGGCCG CTGCGCGTCGCGTTCGGCGAGCTGTCGTTCGTGAAGACGGTCGACGGCAACGCCGAGCAGGACGTCGCGATCCGCACGCA CTGGCCGGCCGCGCTCGACCCGACGCGCGACTACGAGAACGACGTGATGGAGCGCGGCATCGAGGTGCGCGACCGCAGCG GCCTCGATCATCTGCTACGCTACGCGCCGTGCACGAACGCGCAGGGCAACGTGACGGGCTGGATCGCCGGCCTCGTCGAC GTGACCGCGCTGCATGCGGCCGAGCGGCAGCGCGAGGAGGCGCTGCATCTGCTGTCGCACGACATGCGCTCGCCGCAATC GTCGATTCTCGCGCTCGTCGAGATCGAGCGGCAGCGGGCCGAATCCGAGCACACGCGCGGGCTGCTCGCGCGCATCGAGC GCTACGCGCAGCGTGCGCTGATGCTCGCCGACGAGTTCGTGCAGCTCGCGCGCGCGGAATCGCAGACGTACCAGCTCGAG GCGGTGAGCTTCGCCGATTTGCTGATCGACGCGAGCGACGAAGTGTGGCCGCAGGCGCAGGCCAAGCGCATCCGCATCGA CACGTCGTTCGGCGACGAGCCGTGCTGGATCGGCGCCGACCGCTCGCTGATGACCCGCGCGCTCGTGAATCTGTTGAACA ATGCGGTCAAATACAGCCCGACGGACACGGTGATCACGTGTACGCTATCAGTCGAGCCGGGCGCGAAGCGCGTACATTGC ACGATCCGCGACCAGGGCTACGGCATTTCGCTCGAGGATCAGCGGCATCTGTTCGAGCGTTTCAAGCGGTTTCATGCGAA CGAGCGGCCGGAGGTCGCGGGCTCCGGGCTCGGCATGGCGTTCGTCAAGACCGTGGTCGTGCGGCACGGCGGTTGCATCG GCGTCGACAGTACGCCGGGCATCGGCACGGCGATCACCGTGTCGCTGCCGTTGCTCGACGAGCCGGCGGCGTGA
Upstream 100 bases:
>100_bases TACTACTGGAGCGTGATCGCGGAGCGCTACGAAGGCGGCCGTTTCCACGAAAAGGCCAGCGCGGTCAACGCGTTCACGAT CGCGCGCTGATGGGCGGCGG
Downstream 100 bases:
>100_bases CGACACAGGCATTCGGCCGCCCGCGCGAGTGGGGCTCGCGCACGGGCGGATGGCTAGGACGGGGGCGAACAGCGATATGG GAGAAGCTATGAAAGTCTTG
Product: putative two component system histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MRFDRTQRRRLLGRRFLVEWIAIGCLGVAVILAGVAGRMTASVDRIIYDRLLTLRKLPIESNIVIVEIDNRSLDTLGRWP WQRSVHAEFLGALAKTHPAAVVYDVLFTEPSADDRALAKVLDLVPTFLPVLLSPEEPDGTRTVNPPVPVLAQHVAGAGHI NLEVDPDGIVRSVALFESDGLHRWPQLMVPVFHALENGQFKLAQPAPIARRAHDIAQDDNGESRYFVPFSRASQNYPAIS FVDVLAGRVNADELRGKIVIVGATASGLYDRFATPISGEFGPLPGVYIHASVLDTLMTGRAISPVSGWLVFSASLLPLVV LLAGFLMLSPWRSLLLTLSLAALAVASSAALLYEARLWLSPAPAIFGLIAAYPIWNWRRLEMTMSYLRYELQRLADEPHL LPEAPRERNEFGGDVLERQMALMAQAAQRVQDMKRFVWDSLDSMPEPVVVTDLAGTVLIANHAAKRYCARLDAPAPEGRP LRVAFGELSFVKTVDGNAEQDVAIRTHWPAALDPTRDYENDVMERGIEVRDRSGLDHLLRYAPCTNAQGNVTGWIAGLVD VTALHAAERQREEALHLLSHDMRSPQSSILALVEIERQRAESEHTRGLLARIERYAQRALMLADEFVQLARAESQTYQLE AVSFADLLIDASDEVWPQAQAKRIRIDTSFGDEPCWIGADRSLMTRALVNLLNNAVKYSPTDTVITCTLSVEPGAKRVHC TIRDQGYGISLEDQRHLFERFKRFHANERPEVAGSGLGMAFVKTVVVRHGGCIGVDSTPGIGTAITVSLPLLDEPAA
Sequences:
>Translated_797_residues MRFDRTQRRRLLGRRFLVEWIAIGCLGVAVILAGVAGRMTASVDRIIYDRLLTLRKLPIESNIVIVEIDNRSLDTLGRWP WQRSVHAEFLGALAKTHPAAVVYDVLFTEPSADDRALAKVLDLVPTFLPVLLSPEEPDGTRTVNPPVPVLAQHVAGAGHI NLEVDPDGIVRSVALFESDGLHRWPQLMVPVFHALENGQFKLAQPAPIARRAHDIAQDDNGESRYFVPFSRASQNYPAIS FVDVLAGRVNADELRGKIVIVGATASGLYDRFATPISGEFGPLPGVYIHASVLDTLMTGRAISPVSGWLVFSASLLPLVV LLAGFLMLSPWRSLLLTLSLAALAVASSAALLYEARLWLSPAPAIFGLIAAYPIWNWRRLEMTMSYLRYELQRLADEPHL LPEAPRERNEFGGDVLERQMALMAQAAQRVQDMKRFVWDSLDSMPEPVVVTDLAGTVLIANHAAKRYCARLDAPAPEGRP LRVAFGELSFVKTVDGNAEQDVAIRTHWPAALDPTRDYENDVMERGIEVRDRSGLDHLLRYAPCTNAQGNVTGWIAGLVD VTALHAAERQREEALHLLSHDMRSPQSSILALVEIERQRAESEHTRGLLARIERYAQRALMLADEFVQLARAESQTYQLE AVSFADLLIDASDEVWPQAQAKRIRIDTSFGDEPCWIGADRSLMTRALVNLLNNAVKYSPTDTVITCTLSVEPGAKRVHC TIRDQGYGISLEDQRHLFERFKRFHANERPEVAGSGLGMAFVKTVVVRHGGCIGVDSTPGIGTAITVSLPLLDEPAA >Mature_797_residues MRFDRTQRRRLLGRRFLVEWIAIGCLGVAVILAGVAGRMTASVDRIIYDRLLTLRKLPIESNIVIVEIDNRSLDTLGRWP WQRSVHAEFLGALAKTHPAAVVYDVLFTEPSADDRALAKVLDLVPTFLPVLLSPEEPDGTRTVNPPVPVLAQHVAGAGHI NLEVDPDGIVRSVALFESDGLHRWPQLMVPVFHALENGQFKLAQPAPIARRAHDIAQDDNGESRYFVPFSRASQNYPAIS FVDVLAGRVNADELRGKIVIVGATASGLYDRFATPISGEFGPLPGVYIHASVLDTLMTGRAISPVSGWLVFSASLLPLVV LLAGFLMLSPWRSLLLTLSLAALAVASSAALLYEARLWLSPAPAIFGLIAAYPIWNWRRLEMTMSYLRYELQRLADEPHL LPEAPRERNEFGGDVLERQMALMAQAAQRVQDMKRFVWDSLDSMPEPVVVTDLAGTVLIANHAAKRYCARLDAPAPEGRP LRVAFGELSFVKTVDGNAEQDVAIRTHWPAALDPTRDYENDVMERGIEVRDRSGLDHLLRYAPCTNAQGNVTGWIAGLVD VTALHAAERQREEALHLLSHDMRSPQSSILALVEIERQRAESEHTRGLLARIERYAQRALMLADEFVQLARAESQTYQLE AVSFADLLIDASDEVWPQAQAKRIRIDTSFGDEPCWIGADRSLMTRALVNLLNNAVKYSPTDTVITCTLSVEPGAKRVHC TIRDQGYGISLEDQRHLFERFKRFHANERPEVAGSGLGMAFVKTVVVRHGGCIGVDSTPGIGTAITVSLPLLDEPAA
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: COG4252
COG function: function code T; Predicted transmembrane sensor domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=370, Percent_Identity=26.2162162162162, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1786783, Length=221, Percent_Identity=28.5067873303167, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1788549, Length=428, Percent_Identity=23.8317757009346, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1790346, Length=233, Percent_Identity=26.6094420600858, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=28.6919831223629, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1786600, Length=361, Percent_Identity=24.3767313019391, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=22.8448275862069, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=30.1724137931034, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788393, Length=232, Percent_Identity=27.1551724137931, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1789149, Length=225, Percent_Identity=24.4444444444444, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1787894, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1790861, Length=196, Percent_Identity=30.6122448979592, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994928, Length=267, Percent_Identity=24.3445692883895, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88007; Mature: 88007
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDRTQRRRLLGRRFLVEWIAIGCLGVAVILAGVAGRMTASVDRIIYDRLLTLRKLPIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SNIVIVEIDNRSLDTLGRWPWQRSVHAEFLGALAKTHPAAVVYDVLFTEPSADDRALAKV CCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCHHHHHHH LDLVPTFLPVLLSPEEPDGTRTVNPPVPVLAQHVAGAGHINLEVDPDGIVRSVALFESDG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC LHRWPQLMVPVFHALENGQFKLAQPAPIARRAHDIAQDDNGESRYFVPFSRASQNYPAIS CHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCCHH FVDVLAGRVNADELRGKIVIVGATASGLYDRFATPISGEFGPLPGVYIHASVLDTLMTGR HHHHHHCCCCHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCC AISPVSGWLVFSASLLPLVVLLAGFLMLSPWRSLLLTLSLAALAVASSAALLYEARLWLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPAIFGLIAAYPIWNWRRLEMTMSYLRYELQRLADEPHLLPEAPRERNEFGGDVLERQM CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHH ALMAQAAQRVQDMKRFVWDSLDSMPEPVVVTDLAGTVLIANHAAKRYCARLDAPAPEGRP HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCCE LRVAFGELSFVKTVDGNAEQDVAIRTHWPAALDPTRDYENDVMERGIEVRDRSGLDHLLR EEEEECCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHH YAPCTNAQGNVTGWIAGLVDVTALHAAERQREEALHLLSHDMRSPQSSILALVEIERQRA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ESEHTRGLLARIERYAQRALMLADEFVQLARAESQTYQLEAVSFADLLIDASDEVWPQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCC AKRIRIDTSFGDEPCWIGADRSLMTRALVNLLNNAVKYSPTDTVITCTLSVEPGAKRVHC CCEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEE TIRDQGYGISLEDQRHLFERFKRFHANERPEVAGSGLGMAFVKTVVVRHGGCIGVDSTPG EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC IGTAITVSLPLLDEPAA CCEEEEEEEECCCCCCC >Mature Secondary Structure MRFDRTQRRRLLGRRFLVEWIAIGCLGVAVILAGVAGRMTASVDRIIYDRLLTLRKLPIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SNIVIVEIDNRSLDTLGRWPWQRSVHAEFLGALAKTHPAAVVYDVLFTEPSADDRALAKV CCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCHHHHHHH LDLVPTFLPVLLSPEEPDGTRTVNPPVPVLAQHVAGAGHINLEVDPDGIVRSVALFESDG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCC LHRWPQLMVPVFHALENGQFKLAQPAPIARRAHDIAQDDNGESRYFVPFSRASQNYPAIS CHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCCHH FVDVLAGRVNADELRGKIVIVGATASGLYDRFATPISGEFGPLPGVYIHASVLDTLMTGR HHHHHHCCCCHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHCCC AISPVSGWLVFSASLLPLVVLLAGFLMLSPWRSLLLTLSLAALAVASSAALLYEARLWLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPAIFGLIAAYPIWNWRRLEMTMSYLRYELQRLADEPHLLPEAPRERNEFGGDVLERQM CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHH ALMAQAAQRVQDMKRFVWDSLDSMPEPVVVTDLAGTVLIANHAAKRYCARLDAPAPEGRP HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCCE LRVAFGELSFVKTVDGNAEQDVAIRTHWPAALDPTRDYENDVMERGIEVRDRSGLDHLLR EEEEECCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHH YAPCTNAQGNVTGWIAGLVDVTALHAAERQREEALHLLSHDMRSPQSSILALVEIERQRA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ESEHTRGLLARIERYAQRALMLADEFVQLARAESQTYQLEAVSFADLLIDASDEVWPQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCC AKRIRIDTSFGDEPCWIGADRSLMTRALVNLLNNAVKYSPTDTVITCTLSVEPGAKRVHC CCEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEE TIRDQGYGISLEDQRHLFERFKRFHANERPEVAGSGLGMAFVKTVVVRHGGCIGVDSTPG EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC IGTAITVSLPLLDEPAA CCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]