| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719561
Identifier: 53719561
GI number: 53719561
Start: 2319812
End: 2320717
Strand: Reverse
Name: 53719561
Synonym: BPSL1948
Alternate gene names: NA
Gene position: 2320717-2319812 (Counterclockwise)
Preceding gene: 53719562
Following gene: 53719560
Centisome position: 56.96
GC content: 69.65
Gene sequence:
>906_bases ATGTCATCGAATCCCGCCACTTCCGTCTCCCCGCGCGAGCGTCGCGTGCAATGCGCGAATCCGCTGGGGCTGCACCACAT CGCCTATACCGAATGGGGCGATCCCGCGAACCCGCGCGTGCTCGTGTGCGTGCACGGCTTGACGCGTTCGGGGCGCGATT TCGATCGTCTCGCGGCGGCGCTGTCCGATGTCTATCGCGTCGTCTGCCCGGATGTGGCCGGCCGCGGCCGCTCCGACTGG CTCGCGGATCCGAAGCGCTATGCCGTGCCGCAGTACGTGTCCGACATCGTCACGCTGATCGCGCGCCTCGATGTCGAACG CGTCGACTGGTTCGGCACGTCGATGGGCGGCCTGATCGGTCTCGCGCTCGGCGGGCTGCCGGGCACGCCGATCGGCAGGA TGCTCGTCAACGACATCGGGCCGCACATCGAGCCCGCCGCGCTCGAGCGCATCGGCGAATACGTCGGGCTCGACAAGCGC TTTGCGACCGAGCAGGAGGGCGTTGATTATCTGACGTCGCTGTCGCTGTCGTTCGGCCCGCTCACGCCGGACGAGTGGCG CGCGCTGAATCGGCCGTTGCTCGTGCGGGACGCGGACGGCTCGTGGCGCGCACGCTACGACCCGCGGATCGCCGAGCCTT TCAAGACGGCCACGCCGGAGGCGAATGCGCAGGGCGAGGCATGGCTCTGGCATGCGCTCGGGGCGTTCGCGGGGCCGCTG CTCGTCGTGCGCGGCGTGCAGTCGGACCTGCTGTCGCGCGAGACGCTCGAGGCGATGAAGGCGCGCGGACAAGCGGTGAC GAGCGTCGAGATCGCCGAGGCCGGCCATGCGCCCGCGTTCGTGAGCGCCGAGCAGATCGCGATCGCGCGCCAATTTTTCG TCGGGGACGCGCCGCACGCGTCATAA
Upstream 100 bases:
>100_bases GCGTGACGAAGCGGTTTACAATCGGCTCATGTGTTCGGCGGCCCGTCGCCACCGGGGCGCCGAGCGTTCGACCACGCCGA TCGTTCGTCAGGATGCGCCG
Downstream 100 bases:
>100_bases TATGCGGTTCGGCGCGCACGCTCGAACGCGTGCGGCGCCGTCCACCGATCAACCATTCAACCGGGAATTCTCATGGCAGT TACTCGTCATCACGTCGGTC
Product: putative hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSSNPATSVSPRERRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDW LADPKRYAVPQYVSDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKR FATEQEGVDYLTSLSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPL LVVRGVQSDLLSRETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHAS
Sequences:
>Translated_301_residues MSSNPATSVSPRERRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDW LADPKRYAVPQYVSDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKR FATEQEGVDYLTSLSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPL LVVRGVQSDLLSRETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHAS >Mature_300_residues SSNPATSVSPRERRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDWL ADPKRYAVPQYVSDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKRF ATEQEGVDYLTSLSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPLL VVRGVQSDLLSRETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHAS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32641; Mature: 32510
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNPATSVSPRERRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAA CCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHH LSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYVSDIVTLIARLDVERVDWFGTSMGGLIG HHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHH LALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKRFATEQEGVDYLTSLSLSFGP HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCC LTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPL CCCHHHHHCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LVVRGVQSDLLSRETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC S C >Mature Secondary Structure SSNPATSVSPRERRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAA CCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHH LSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYVSDIVTLIARLDVERVDWFGTSMGGLIG HHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHH LALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKRFATEQEGVDYLTSLSLSFGP HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCC LTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPL CCCHHHHHCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LVVRGVQSDLLSRETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA