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The map label for this gene is yoaB [C]

Identifier: 53719560

GI number: 53719560

Start: 2319386

End: 2319739

Strand: Reverse

Name: yoaB [C]

Synonym: BPSL1947

Alternate gene names: 53719560

Gene position: 2319739-2319386 (Counterclockwise)

Preceding gene: 53719561

Following gene: 53719559

Centisome position: 56.93

GC content: 66.1

Gene sequence:

>354_bases
ATGGCAGTTACTCGTCATCACGTCGGTCCCCGTCTTTCCGAAATCGCGATTCACAACGGCACCGTCTATCTCGCGGGCCA
GATCGCCGAGGACACGGCGCAGGACATCAAGGGCCAGACGCGCGAAGTGCTCGCCCACGTCGATCGCCTGCTCGCCGAGG
CGAACAGCGACAAGGCGCACCTGCTGTCGGTGCAGATCTTCATCTCCGACATGGCGAACTTCCCGGGCATGAACGAAGTG
TGGGACGCATGGGTGGCCCAGGGCGCAACGCCGCCGCGCGCGACCGTCGAGGCGAAGCTCGCGAACCCCGCTTGCCTGGT
CGAGGTGGTGGTGGTCGCCGCGCAACGCGGCTGA

Upstream 100 bases:

>100_bases
CGTCGGGGACGCGCCGCACGCGTCATAATATGCGGTTCGGCGCGCACGCTCGAACGCGTGCGGCGCCGTCCACCGATCAA
CCATTCAACCGGGAATTCTC

Downstream 100 bases:

>100_bases
GCCGGCGCGCGCACGTTTTTTCAGGCAACTGGCCATACCCGACGATGACAGCCGATTCCGCTTCCACCGCCGCGGCGCCG
TCGCTCGACGACGTGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAHLLSVQIFISDMANFPGMNEV
WDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQRG

Sequences:

>Translated_117_residues
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAHLLSVQIFISDMANFPGMNEV
WDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQRG
>Mature_116_residues
AVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAHLLSVQIFISDMANFPGMNEVW
DAWVAQGATPPRATVEAKLANPACLVEVVVVAAQRG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=40.3508771929825, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12561; Mature: 12430

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAH
CCCCCCCCCCCHHHEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCH
LLSVQIFISDMANFPGMNEVWDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQRG
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHVDRLLAEANSDKAH
CCCCCCCCCCHHHEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCH
LLSVQIFISDMANFPGMNEVWDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQRG
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA