Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53719433

Identifier: 53719433

GI number: 53719433

Start: 2168060

End: 2168578

Strand: Reverse

Name: 53719433

Synonym: BPSL1820

Alternate gene names: NA

Gene position: 2168578-2168060 (Counterclockwise)

Preceding gene: 53719434

Following gene: 53719432

Centisome position: 53.22

GC content: 77.26

Gene sequence:

>519_bases
GTGGCGCGCCGGCCGGACTTCCCGATTTCACGCACGCCCATGATTCTCCCGCTCAAGCTCGTCGCCAGTTGGACGCTCGC
GTCGCTCGCGCTCGCCGATCTGCGCACGCGGCGGCTCGCGACCTTCGCGGTCGCGCTCGTCGGCGCGCTGTACGCCGCGC
TGGCGCTCGCGGGCGCGCCGGGCGACGGCGGCTTCGCGTCGCATGCGGCGCTCGGCGCGGCCGCGTTCGCGCTCGGCGCG
GCGATGTTCCGCGCCGGCTGGATCGCCGGCGGCGATGTCAAGCTCGCGGCCGTGGTGTTTCTATGGGCAGGCCCCGCGCA
CGCGTGGCCCGTCGCGTTCGCGATCGGCGTCGGCGGCTTGGCCGTCGGCGCCGTCTGCATCGCGGCCGGGCGTGCGCCGC
GCGTGCTCGCGTGGTTCGCGCCGGCGCGCGGCGTGCCGTACGGGGTCGCGCTCGCGGCGGGCGGCCTGCTCGCCGTATGG
GCGCCGGCGGCTTGCCGGCTGCCCGGATGTCTCGGATGA

Upstream 100 bases:

>100_bases
GGCGGCTCCGGCTTGCCGGAATTGTTCCAGAACATGATCACCAAGGTGACGAGCGTACAGACCAACGGCCATTGACGATG
AACGGCCGGTGGCGCCTGCC

Downstream 100 bases:

>100_bases
CGGGCGGCTGATATGTCCCATTTTCTCAAGCTCGCCGGCCTGATGCTCGTCGCGGTGGTCGGCGCGTTTCTGTTCCGTGT
GCTGTACGTCGCGGCGTCGC

Product: putative fimbriae assembly-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MARRPDFPISRTPMILPLKLVASWTLASLALADLRTRRLATFAVALVGALYAALALAGAPGDGGFASHAALGAAAFALGA
AMFRAGWIAGGDVKLAAVVFLWAGPAHAWPVAFAIGVGGLAVGAVCIAAGRAPRVLAWFAPARGVPYGVALAAGGLLAVW
APAACRLPGCLG

Sequences:

>Translated_172_residues
MARRPDFPISRTPMILPLKLVASWTLASLALADLRTRRLATFAVALVGALYAALALAGAPGDGGFASHAALGAAAFALGA
AMFRAGWIAGGDVKLAAVVFLWAGPAHAWPVAFAIGVGGLAVGAVCIAAGRAPRVLAWFAPARGVPYGVALAAGGLLAVW
APAACRLPGCLG
>Mature_171_residues
ARRPDFPISRTPMILPLKLVASWTLASLALADLRTRRLATFAVALVGALYAALALAGAPGDGGFASHAALGAAAFALGAA
MFRAGWIAGGDVKLAAVVFLWAGPAHAWPVAFAIGVGGLAVGAVCIAAGRAPRVLAWFAPARGVPYGVALAAGGLLAVWA
PAACRLPGCLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17121; Mature: 16990

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRPDFPISRTPMILPLKLVASWTLASLALADLRTRRLATFAVALVGALYAALALAGAP
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDGGFASHAALGAAAFALGAAMFRAGWIAGGDVKLAAVVFLWAGPAHAWPVAFAIGVGGL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHEEECCCCCCHHHHHHHHHHHHH
AVGAVCIAAGRAPRVLAWFAPARGVPYGVALAAGGLLAVWAPAACRLPGCLG
HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCHHEECCCHHHCCCCCCC
>Mature Secondary Structure 
ARRPDFPISRTPMILPLKLVASWTLASLALADLRTRRLATFAVALVGALYAALALAGAP
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDGGFASHAALGAAAFALGAAMFRAGWIAGGDVKLAAVVFLWAGPAHAWPVAFAIGVGGL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHEEECCCCCCHHHHHHHHHHHHH
AVGAVCIAAGRAPRVLAWFAPARGVPYGVALAAGGLLAVWAPAACRLPGCLG
HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCHHEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA