| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53719234
Identifier: 53719234
GI number: 53719234
Start: 1857508
End: 1858344
Strand: Reverse
Name: 53719234
Synonym: BPSL1604
Alternate gene names: NA
Gene position: 1858344-1857508 (Counterclockwise)
Preceding gene: 53719235
Following gene: 53719233
Centisome position: 45.61
GC content: 70.73
Gene sequence:
>837_bases ATGAGTACGCTGACCTCCCGCCCGCTGTGGGCGCAAATCCGCGTGATCGCCGGCAAGGAATTCCACGACCGGATCCGCAA CCGCTGGGTGCTCGCGATCTCGATCGTGTTCGCCGCGTTCACGCTCGCGATCTCGTACTTCGGCGCGGCCGCGCAGGGCG CGGTCGGCTTTCACGGAATCGAGCCGCTGATCGCGAGCCTCGTGAGCCTCGCGATCTATCTGCTGCCGCTCATCGCGCTG ATTCTCGGCTTCGACGCGCTCGTCGGCGAGCGCGAGCGCGGCACGCTGAGCCTGCTGCTGTCGTACCCGCTCACCCGCAC CGAGCTGCTCGTCGGCAAGTACGTCGGCCTCGCGGCCGCGCTCACCTGCGCGACGCTCGCGGGCTTCGGCGCGGCGGGCG CGGTGATCGCCGCGCGCATGAGCGCCGCCGACTGGTATCAGTACGCGGGCTTCGTGCTGAGCGCGGTGCTGCTCGGCTGG GTGTTCCTGAGCCTCGCCGTATGCGCGTCGGCGTTCTGCGCGAGCCGCACGTCGGCGAGCGGCGTCGCGATCGCGCTGTG GTTCTGCTTCGTGCTCGTGTACGACCTGCTGCTGCTCGGCGCGCTCGTGCTCACGGGCGGCGCCGGGCTCGGCCCCGCGC TGCCGCTGTTGCTGCTGCTCAATCCGGCCGACGTGTTCCGCGTGCTGAACATCTTCGGCCCGGGCGATCTGCGCGCGATG TTCGGCGCGGTCAGCGCCTTTCCCGCGGCGCTCGCGTCGCCCCTGTTGCTCGGCCCGGTGATGCTCGCGTGGATCGCGGC GCCGCTCGGCCTCGCCGCCTGGAGATTCAATCGATGA
Upstream 100 bases:
>100_bases CCGCGCTGGCGCCGCTCGGCGCGCGCATCGTCGACCTGCGCATTCACGAGCCGTCGCTCGAAGACATGTTTCTCGGCTAT GCCGGCTGCGAGGCGAACGC
Downstream 100 bases:
>100_bases AACGCCGTTTCCTTTCCGCCGCCGTGCGCACGAGCATCGCGGCGCTCGCCAGCGCCGCGCTCGTGGCCGCATGCGGCCAC GACGCGCAGACGCCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSTLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYLLPLIAL ILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAALTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGW VFLSLAVCASAFCASRTSASGVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR
Sequences:
>Translated_278_residues MSTLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYLLPLIAL ILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAALTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGW VFLSLAVCASAFCASRTSASGVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR >Mature_277_residues STLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGIEPLIASLVSLAIYLLPLIALI LGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAALTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGWV FLSLAVCASAFCASRTSASGVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAMF GAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR
Specific function: Involved in copper processing [H]
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29155; Mature: 29024
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGI CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EPLIASLVSLAIYLLPLIALILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH LTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGWVFLSLAVCASAFCASRTSAS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHH FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STLTSRPLWAQIRVIAGKEFHDRIRNRWVLAISIVFAAFTLAISYFGAAAQGAVGFHGI CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EPLIASLVSLAIYLLPLIALILGFDALVGERERGTLSLLLSYPLTRTELLVGKYVGLAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH LTCATLAGFGAAGAVIAARMSAADWYQYAGFVLSAVLLGWVFLSLAVCASAFCASRTSAS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVAIALWFCFVLVYDLLLLGALVLTGGAGLGPALPLLLLLNPADVFRVLNIFGPGDLRAM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHH FGAVSAFPAALASPLLLGPVMLAWIAAPLGLAAWRFNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2170125 [H]