Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is hyi [H]

Identifier: 53719087

GI number: 53719087

Start: 1687165

End: 1687953

Strand: Reverse

Name: hyi [H]

Synonym: BPSL1451

Alternate gene names: 53719087

Gene position: 1687953-1687165 (Counterclockwise)

Preceding gene: 53719088

Following gene: 53719086

Centisome position: 41.43

GC content: 68.57

Gene sequence:

>789_bases
ATGCCGAAATTCGCCGCCAACCTGACGATGCTGTTCAACGAAGTCCCGTTTCTCGACCGTTTCGCCGCAGCGGCCGAAGC
GGGCTTCAGCGCCGTCGAGTTCCTGTTTCCCTATCCGTACGCGAAGGACGAGCTCGCCGAGCGGCTCGACGCGAATCGCC
TGCGCCTCGTGCTGCACAACCTGCCCGCGGGCCACTGGGATCAGGGCGAGCGCGGAATCGCGTGCCTGCCCGATCGCATC
GGCGAATTCCAGGACGGCGTCGGCCGCGCGATCGACTATGCGCGCGCGCTGAAGGTGCCGCAGCTGAATTGCCTCGTCGG
CATCGCGCCCGCGAGCGTCGGGCGCGACACGGCGCTCGCGACGATCGTCGAGAACCTGCGCTTCGCCGCCGCCGAGCTGA
AGAAGGCGGGCCTGCGCCTGCTCGTCGAGCCATGCAACGCGTACGACATCCCCGGCTTCGCGCTGAACCGCTCCGCCGAG
GCGCTCGACGTGATCCGCGCGGTCGGCGCCGACAACCTCTTCCTGCAGTACGACATCTATCACATGCAGCGCATGGAGGG
CGAGCTCGCGGCGACGATCCGCCGGCACATCGGCGCGATCGCGCATGTCCAGATCGCGGACAACCCGGGCCGGCACGAAC
CGGGCACGGGCGAGATCCATTACGCGTTCCTGTTCGATCTGCTCGACGAGCTCGGCTACGACGGCTATGTCGGCTGCGAA
TACAAGCCGCGCACGACGACGGCCGAGGGCCTCGGCTGGCTGCGGCGGATCGCGCGCGTCGCCGCGTGA

Upstream 100 bases:

>100_bases
CGCACCGCCCGCCCGGTCGATCAGTTCGACTGATCGATTCGGCCGGCTCGCTCACCTGGCTTCATCCGACCTCAACTGAC
CGACCAGCGAGACCTCATCC

Downstream 100 bases:

>100_bases
TCCGCGCACGCGTCGACGCCCGAGCTCATCCGCGCATCACTCATTCATTCCGAATTCGCGATCCACAGGATTCGCCAGAC
TCACAGGAGACACTGCAATG

Product: hydroxypyruvate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPKFAANLTMLFNEVPFLDRFAAAAEAGFSAVEFLFPYPYAKDELAERLDANRLRLVLHNLPAGHWDQGERGIACLPDRI
GEFQDGVGRAIDYARALKVPQLNCLVGIAPASVGRDTALATIVENLRFAAAELKKAGLRLLVEPCNAYDIPGFALNRSAE
ALDVIRAVGADNLFLQYDIYHMQRMEGELAATIRRHIGAIAHVQIADNPGRHEPGTGEIHYAFLFDLLDELGYDGYVGCE
YKPRTTTAEGLGWLRRIARVAA

Sequences:

>Translated_262_residues
MPKFAANLTMLFNEVPFLDRFAAAAEAGFSAVEFLFPYPYAKDELAERLDANRLRLVLHNLPAGHWDQGERGIACLPDRI
GEFQDGVGRAIDYARALKVPQLNCLVGIAPASVGRDTALATIVENLRFAAAELKKAGLRLLVEPCNAYDIPGFALNRSAE
ALDVIRAVGADNLFLQYDIYHMQRMEGELAATIRRHIGAIAHVQIADNPGRHEPGTGEIHYAFLFDLLDELGYDGYVGCE
YKPRTTTAEGLGWLRRIARVAA
>Mature_261_residues
PKFAANLTMLFNEVPFLDRFAAAAEAGFSAVEFLFPYPYAKDELAERLDANRLRLVLHNLPAGHWDQGERGIACLPDRIG
EFQDGVGRAIDYARALKVPQLNCLVGIAPASVGRDTALATIVENLRFAAAELKKAGLRLLVEPCNAYDIPGFALNRSAEA
LDVIRAVGADNLFLQYDIYHMQRMEGELAATIRRHIGAIAHVQIADNPGRHEPGTGEIHYAFLFDLLDELGYDGYVGCEY
KPRTTTAEGLGWLRRIARVAA

Specific function: Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) [H]

COG id: COG3622

COG function: function code G; Hydroxypyruvate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Homo sapiens, GI300068962, Length=260, Percent_Identity=41.1538461538462, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI300068964, Length=243, Percent_Identity=39.0946502057613, Blast_Score=156, Evalue=2e-38,
Organism=Escherichia coli, GI1786718, Length=254, Percent_Identity=56.2992125984252, Blast_Score=290, Evalue=6e-80,
Organism=Escherichia coli, GI1789095, Length=254, Percent_Identity=45.2755905511811, Blast_Score=233, Evalue=7e-63,
Organism=Caenorhabditis elegans, GI17552022, Length=254, Percent_Identity=38.5826771653543, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI17530883, Length=262, Percent_Identity=35.1145038167939, Blast_Score=164, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017643
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.22 [H]

Molecular weight: Translated: 28868; Mature: 28737

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFAANLTMLFNEVPFLDRFAAAAEAGFSAVEFLFPYPYAKDELAERLDANRLRLVLHN
CCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHH
LPAGHWDQGERGIACLPDRIGEFQDGVGRAIDYARALKVPQLNCLVGIAPASVGRDTALA
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH
TIVENLRFAAAELKKAGLRLLVEPCNAYDIPGFALNRSAEALDVIRAVGADNLFLQYDIY
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEHHH
HMQRMEGELAATIRRHIGAIAHVQIADNPGRHEPGTGEIHYAFLFDLLDELGYDGYVGCE
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCC
YKPRTTTAEGLGWLRRIARVAA
CCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKFAANLTMLFNEVPFLDRFAAAAEAGFSAVEFLFPYPYAKDELAERLDANRLRLVLHN
CCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHH
LPAGHWDQGERGIACLPDRIGEFQDGVGRAIDYARALKVPQLNCLVGIAPASVGRDTALA
CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH
TIVENLRFAAAELKKAGLRLLVEPCNAYDIPGFALNRSAEALDVIRAVGADNLFLQYDIY
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEHHH
HMQRMEGELAATIRRHIGAIAHVQIADNPGRHEPGTGEIHYAFLFDLLDELGYDGYVGCE
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCC
YKPRTTTAEGLGWLRRIARVAA
CCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8440684; 10561547; 9278503 [H]