Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is 53718203

Identifier: 53718203

GI number: 53718203

Start: 616192

End: 616656

Strand: Reverse

Name: 53718203

Synonym: BPSL0563

Alternate gene names: NA

Gene position: 616656-616192 (Counterclockwise)

Preceding gene: 53718204

Following gene: 53718201

Centisome position: 15.13

GC content: 52.04

Gene sequence:

>465_bases
GTGATGAAGATAAAGATTCATTGGACCACCGCATTGACCCTTCGAGCTGACCCACAGCTCATATATAGCCCGTCTGTACT
TGAAAGCGTGGACGACGTGCCGGGGGTCTATGTATTCGCGCGGAAGTACGGCAGTCGCGTTACCCCGCTGTATGTGGGGA
AAGCTCTAAACCTAAAAGGGAGAATCAAGCAACAGTTAAACAACTTGCGACTGATGCGCCAAATCCAGGACTGGGAAAAA
AACGGCGCTCGGGTCCTTTTGCTTGGGTATCTGAAGGTTCACGGTTCGCAAGACGTAGGAACGGCGTTGGACGTCATCGA
GCGCGCACTGATTGAACATGGGCTTGCCGAGGGACATCCACTCGTCAACGTACAAGGTACTCGTACTCCGTTCCACACAC
TAAGCTTCACGGGCAATAGAATGTCCGAACAGGTTGCGCCACGTCAGATGTTCGTTAAAGCATGA

Upstream 100 bases:

>100_bases
CGCCATGCGAGCACCAGATTGATAGGCTCCATTTCGCAAAGGTCGGCGAGTCGTAGGTTGAAGCTCTCCGAGCGCCCTAA
GTAATTTCTGATTTGATAGA

Downstream 100 bases:

>100_bases
AAGCGAGCTCCCCACGAGCCTCAAACTCGTGGGGCCTGTCGGGGATGGCCTTGGCCTGAGATGCGTCCGCTTCCGTGCCT
TGATTTTTCGCTCAAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMKIKIHWTTALTLRADPQLIYSPSVLESVDDVPGVYVFARKYGSRVTPLYVGKALNLKGRIKQQLNNLRLMRQIQDWEK
NGARVLLLGYLKVHGSQDVGTALDVIERALIEHGLAEGHPLVNVQGTRTPFHTLSFTGNRMSEQVAPRQMFVKA

Sequences:

>Translated_154_residues
MMKIKIHWTTALTLRADPQLIYSPSVLESVDDVPGVYVFARKYGSRVTPLYVGKALNLKGRIKQQLNNLRLMRQIQDWEK
NGARVLLLGYLKVHGSQDVGTALDVIERALIEHGLAEGHPLVNVQGTRTPFHTLSFTGNRMSEQVAPRQMFVKA
>Mature_154_residues
MMKIKIHWTTALTLRADPQLIYSPSVLESVDDVPGVYVFARKYGSRVTPLYVGKALNLKGRIKQQLNNLRLMRQIQDWEK
NGARVLLLGYLKVHGSQDVGTALDVIERALIEHGLAEGHPLVNVQGTRTPFHTLSFTGNRMSEQVAPRQMFVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17336; Mature: 17336

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIKIHWTTALTLRADPQLIYSPSVLESVDDVPGVYVFARKYGSRVTPLYVGKALNLKG
CEEEEEEEEEEEEEECCCCEEECCHHHHHHCCCCCEEEEEEHHCCCCCEEEECEECCCHH
RIKQQLNNLRLMRQIQDWEKNGARVLLLGYLKVHGSQDVGTALDVIERALIEHGLAEGHP
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
LVNVQGTRTPFHTLSFTGNRMSEQVAPRQMFVKA
EEEEECCCCCCEEEEECCCHHHHHCCCHHHEECC
>Mature Secondary Structure
MMKIKIHWTTALTLRADPQLIYSPSVLESVDDVPGVYVFARKYGSRVTPLYVGKALNLKG
CEEEEEEEEEEEEEECCCCEEECCHHHHHHCCCCCEEEEEEHHCCCCCEEEECEECCCHH
RIKQQLNNLRLMRQIQDWEKNGARVLLLGYLKVHGSQDVGTALDVIERALIEHGLAEGHP
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
LVNVQGTRTPFHTLSFTGNRMSEQVAPRQMFVKA
EEEEECCCCCCEEEEECCCHHHHHCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA