| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718201
Identifier: 53718201
GI number: 53718201
Start: 614880
End: 615416
Strand: Reverse
Name: 53718201
Synonym: BPSL0561
Alternate gene names: NA
Gene position: 615416-614880 (Counterclockwise)
Preceding gene: 53718203
Following gene: 53718200
Centisome position: 15.1
GC content: 56.42
Gene sequence:
>537_bases TTGAAAGACGGGGAAAACGTGAAGAAATCGGGGATTGTCGCGGCTTCTGTGCTCGCCGCAGCTTTGCTAGCCATCGCCTC GCCGGCGACATACGCATGGACCGACATTGTCTCGGGCCCGTACGTCGAGACCGCGCCACATTATCTTTCGCACACGTTCT ATGTGTCCGGCGTTTGGCCAACCAAGGGGAAAGCATCGGCCCAAGCACATATGGAGTGCGTACAGGACAACAGCTTCGAG GACCGCTTTCGCGGTAGCTGCCAATCAATCGCAACGTTCGACGGCCCGGCTGTCATTGCTCTTGTGTCCGCTCAGAATCA CTACTGGTCAGCATATGCAGACCCTGACACGAACACCGCAGTGCGAAAGGCAATGGCACTTTGTCATAAGGACAAAGCGG AGGAGTGCCAGCTGACCAATATCTACTGGGATTTCGGGCACAACTTCCTCGATGCCCCGGAGAGCTTCAAGCAGCTCTAC ATGAAACTTCACGACGGCGAATACTGGCGGCCGCTGAAGGGCTACTGGGTTCCCTGA
Upstream 100 bases:
>100_bases AAGGAAGCTGGCTCCTGCCAGCGGACCGGCGATATTTCGCCCATGCATCGGCGTCCGTGACCGAGCTCCGGACCGCGAGC GGCCGGGCGTCGGTCGAAAT
Downstream 100 bases:
>100_bases GTCGCTTGCCTGAAACCGCCCGAGGCGCTGCCATGTAGCGCCTCCGTTACGGTATGTGCCCGCCATCGTCTTCGAGGACG TCCCGACTGAGGCGAGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKDGENVKKSGIVAASVLAAALLAIASPATYAWTDIVSGPYVETAPHYLSHTFYVSGVWPTKGKASAQAHMECVQDNSFE DRFRGSCQSIATFDGPAVIALVSAQNHYWSAYADPDTNTAVRKAMALCHKDKAEECQLTNIYWDFGHNFLDAPESFKQLY MKLHDGEYWRPLKGYWVP
Sequences:
>Translated_178_residues MKDGENVKKSGIVAASVLAAALLAIASPATYAWTDIVSGPYVETAPHYLSHTFYVSGVWPTKGKASAQAHMECVQDNSFE DRFRGSCQSIATFDGPAVIALVSAQNHYWSAYADPDTNTAVRKAMALCHKDKAEECQLTNIYWDFGHNFLDAPESFKQLY MKLHDGEYWRPLKGYWVP >Mature_178_residues MKDGENVKKSGIVAASVLAAALLAIASPATYAWTDIVSGPYVETAPHYLSHTFYVSGVWPTKGKASAQAHMECVQDNSFE DRFRGSCQSIATFDGPAVIALVSAQNHYWSAYADPDTNTAVRKAMALCHKDKAEECQLTNIYWDFGHNFLDAPESFKQLY MKLHDGEYWRPLKGYWVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19787; Mature: 19787
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDGENVKKSGIVAASVLAAALLAIASPATYAWTDIVSGPYVETAPHYLSHTFYVSGVWP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHEEEEEEEECC TKGKASAQAHMECVQDNSFEDRFRGSCQSIATFDGPAVIALVSAQNHYWSAYADPDTNTA CCCCCHHHHHHHHHCCCCHHHHHCCCHHHHEECCCCEEEEEEECCCCEEEEECCCCCCHH VRKAMALCHKDKAEECQLTNIYWDFGHNFLDAPESFKQLYMKLHDGEYWRPLKGYWVP HHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKDGENVKKSGIVAASVLAAALLAIASPATYAWTDIVSGPYVETAPHYLSHTFYVSGVWP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHEEEEEEEECC TKGKASAQAHMECVQDNSFEDRFRGSCQSIATFDGPAVIALVSAQNHYWSAYADPDTNTA CCCCCHHHHHHHHHCCCCHHHHHCCCHHHHEECCCCEEEEEEECCCCEEEEECCCCCCHH VRKAMALCHKDKAEECQLTNIYWDFGHNFLDAPESFKQLYMKLHDGEYWRPLKGYWVP HHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA