| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718204
Identifier: 53718204
GI number: 53718204
Start: 616778
End: 617386
Strand: Reverse
Name: 53718204
Synonym: BPSL0564
Alternate gene names: NA
Gene position: 617386-616778 (Counterclockwise)
Preceding gene: 53718205
Following gene: 53718203
Centisome position: 15.15
GC content: 57.47
Gene sequence:
>609_bases ATGAGTGCAAACCAGACTATCGTAATCGATTGCCCGCAATGCGCCGTTCGCGTTAAGTCCGAAGCCTCCTGCTGGGTCGG TGATGCGCAAGAACAAGCATATTTCCTAGCGGAATGTCCGTCCTGTCGCCAGGCATTGTTCGGCTCATCTTCCCTCATTC GCGACGAGCGGGGTGACTGGGAGTGGGACACAGCGGAACGGCTTTGGCCTGCGCCAATGATAGCGGACTTGGGTCCGTCG GTCCCGCCTGCGGCGCGGCGAGACGTGAGCGCCGCGCAAAAGTGCTTTAGTCACGGCATCTATCCCGCCGCTGCGGTTAT GTGCGGCCGTGCTTTAGAGCGACTCGTCGCGGAAAAGACGGGGAAACCACAGTCCCTTGCTAGGGGCCTTGCCGAATTGA GAGCGCAAGGTGTCATCGACGAACGGCTTCACGCGTGGGCAGATGCCTTACGTGTCGAGCGCAATATCGGCGCTCATGCG TCCAACACGGAAACGACGAAAGACGATGCCGAAGACATCATCGACTTTACAGTCGCGATATTCGACTACGTCTACACTCT TGCGGAGCGATATCAAAAGTATCTCAAACGAAAAGAGGCTGGGGGATAG
Upstream 100 bases:
>100_bases CGACCCCGCACCGTTCAAGTCCACTGCAACACCGAAAGCCACGAAGGAACTGAAGGCACCTCCCGCCGGCTACAAGGGGC GACCCTGTTAGAGGCAACAC
Downstream 100 bases:
>100_bases CCGCCCTCGGTACGAGGAAGACGCCATGCGAGCACCAGATTGATAGGCTCCATTTCGCAAAGGTCGGCGAGTCGTAGGTT GAAGCTCTCCGAGCGCCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSANQTIVIDCPQCAVRVKSEASCWVGDAQEQAYFLAECPSCRQALFGSSSLIRDERGDWEWDTAERLWPAPMIADLGPS VPPAARRDVSAAQKCFSHGIYPAAAVMCGRALERLVAEKTGKPQSLARGLAELRAQGVIDERLHAWADALRVERNIGAHA SNTETTKDDAEDIIDFTVAIFDYVYTLAERYQKYLKRKEAGG
Sequences:
>Translated_202_residues MSANQTIVIDCPQCAVRVKSEASCWVGDAQEQAYFLAECPSCRQALFGSSSLIRDERGDWEWDTAERLWPAPMIADLGPS VPPAARRDVSAAQKCFSHGIYPAAAVMCGRALERLVAEKTGKPQSLARGLAELRAQGVIDERLHAWADALRVERNIGAHA SNTETTKDDAEDIIDFTVAIFDYVYTLAERYQKYLKRKEAGG >Mature_201_residues SANQTIVIDCPQCAVRVKSEASCWVGDAQEQAYFLAECPSCRQALFGSSSLIRDERGDWEWDTAERLWPAPMIADLGPSV PPAARRDVSAAQKCFSHGIYPAAAVMCGRALERLVAEKTGKPQSLARGLAELRAQGVIDERLHAWADALRVERNIGAHAS NTETTKDDAEDIIDFTVAIFDYVYTLAERYQKYLKRKEAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22280; Mature: 22149
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANQTIVIDCPQCAVRVKSEASCWVGDAQEQAYFLAECPSCRQALFGSSSLIRDERGDW CCCCCEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCC EWDTAERLWPAPMIADLGPSVPPAARRDVSAAQKCFSHGIYPAAAVMCGRALERLVAEKT CCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC GKPQSLARGLAELRAQGVIDERLHAWADALRVERNIGAHASNTETTKDDAEDIIDFTVAI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FDYVYTLAERYQKYLKRKEAGG HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SANQTIVIDCPQCAVRVKSEASCWVGDAQEQAYFLAECPSCRQALFGSSSLIRDERGDW CCCCEEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCC EWDTAERLWPAPMIADLGPSVPPAARRDVSAAQKCFSHGIYPAAAVMCGRALERLVAEKT CCCHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC GKPQSLARGLAELRAQGVIDERLHAWADALRVERNIGAHASNTETTKDDAEDIIDFTVAI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH FDYVYTLAERYQKYLKRKEAGG HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA