| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is prs [H]
Identifier: 53718161
GI number: 53718161
Start: 574124
End: 575080
Strand: Reverse
Name: prs [H]
Synonym: BPSL0521
Alternate gene names: 53718161
Gene position: 575080-574124 (Counterclockwise)
Preceding gene: 53718162
Following gene: 161723210
Centisome position: 14.11
GC content: 63.95
Gene sequence:
>957_bases ATGAGCAGCCATGACGGCCTGATGGTTTTTACTGGCAACGCCAATCCCGCGCTTGCTCAGGAAGTCGTCAAAATTCTGGG TATTCCCCTCGGCAAAGCAATGGTCAGCCGTTTCTCCGACGGCGAGATCCAAGTCGAAATCCAGGAAAACGTGCGCGGCA AGGACGTCTTCGTCCTGCAATCGACGTGCGCGCCGACGAACGACAACCTGATGGAACTGATGATCATGGTCGATGCGCTC AAGCGCGCATCCGCCGGCCGGATCACCGCCGCCATCCCCTACTTCGGCTATGCGCGCCAGGATCGCCGCCCGCGTTCGGC GCGCGTCGCGATCTCCGCGAAGGTCGTCGCGAACATGCTGGAAATCGCCGGCGTCGAGCGGATCATCACGATGGATCTGC ACGCCGACCAGATTCAAGGCTTCTTCGACATCCCCGTCGACAACATCTACGCGACGCCGATCCTGCTGGGCGACCTGCGC AAGCAGAACTACCCGGATCTGCTCGTCGTGTCGCCGGACGTCGGCGGCGTCGTGCGCGCCCGCGCGCTCGCGAAGCAGCT GAACTGCGATCTCGCGATCATCGACAAGCGCCGTCCGAAGGCGAATGTCGCCGAAGTGATGAACATCATCGGTGAAGTCG AAGGCCGCACCTGCGTGATCATGGACGACATGGTCGACACGGCGGGCACGCTCTGCAAGGCCGCGCAAGTGCTCAAGGAG CGCGGCGCGAAGCAGGTGTTCGCGTATGCGACGCACCCGGTGCTCTCGGGCGGCGCGGCCGACCGGATCGCCGCTTCGGC GCTCGACGAACTTGTCGTCACCGACACGATTCCGCTGTCCGCCGAATCGCTCGCGTGCCCGAAGATCCGCGCGCTATCGA GCGCGGGCCTCCTCGCCGAGACGTTCTCGCGGATCCGCCGCGGCGATTCGGTGATGTCGCTGTTCGCGGAATCGTAA
Upstream 100 bases:
>100_bases GCACCGGATTTTGATTCCGGCATGCGAGGGTTCGAGTCCTTCCTCCCCTGCCAAAATTTCTTTCCCGCATTTCCCGCCTT AAGCCCGAAGCAGGTGCACG
Downstream 100 bases:
>100_bases AGCGATCCGCCGCCAAACGGTTTAGCGCAAAAGGCGAAGCGACGAGCTTCGCTTTTTGCACAATCGGCCGGGACCGACGA ACCCCCGGCCATCGATCGGG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDAL KRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLR KQNYPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE RGAKQVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRRGDSVMSLFAES
Sequences:
>Translated_318_residues MSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDAL KRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLR KQNYPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE RGAKQVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRRGDSVMSLFAES >Mature_317_residues SSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALK RASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRK QNYPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKER GAKQVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRRGDSVMSLFAES
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=47.4522292993631, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=47.4522292993631, Blast_Score=298, Evalue=6e-81, Organism=Homo sapiens, GI84875539, Length=316, Percent_Identity=46.8354430379747, Blast_Score=298, Evalue=6e-81, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=47.4522292993631, Blast_Score=297, Evalue=1e-80, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=36.9942196531792, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI194018537, Length=345, Percent_Identity=37.6811594202899, Blast_Score=210, Evalue=1e-54, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=36.9127516778523, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=36.9127516778523, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=36.9127516778523, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=36.9127516778523, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1787458, Length=310, Percent_Identity=63.8709677419355, Blast_Score=416, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17554702, Length=314, Percent_Identity=46.4968152866242, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI25149168, Length=314, Percent_Identity=46.4968152866242, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=46.9453376205788, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI71989924, Length=314, Percent_Identity=46.4968152866242, Blast_Score=294, Evalue=4e-80, Organism=Caenorhabditis elegans, GI17570245, Length=340, Percent_Identity=34.1176470588235, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321776, Length=313, Percent_Identity=44.408945686901, Blast_Score=265, Evalue=6e-72, Organism=Saccharomyces cerevisiae, GI6319403, Length=318, Percent_Identity=43.3962264150943, Blast_Score=265, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=319, Percent_Identity=42.6332288401254, Blast_Score=262, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=43.3673469387755, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6324511, Length=108, Percent_Identity=39.8148148148148, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355239, Length=314, Percent_Identity=48.7261146496815, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI45551540, Length=336, Percent_Identity=45.5357142857143, Blast_Score=286, Evalue=1e-77, Organism=Drosophila melanogaster, GI24651458, Length=359, Percent_Identity=33.4261838440111, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI24651456, Length=359, Percent_Identity=33.4261838440111, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI281362873, Length=359, Percent_Identity=33.4261838440111, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI24651454, Length=359, Percent_Identity=33.4261838440111, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI24651462, Length=207, Percent_Identity=37.6811594202899, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24651464, Length=207, Percent_Identity=37.6811594202899, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI45552010, Length=207, Percent_Identity=37.6811594202899, Blast_Score=141, Evalue=5e-34,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34211; Mature: 34080
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQ CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEEE STCAPTNDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANML CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEHHHHHHHHH EIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRA HHCCCCEEEEEECCHHHHCCEEECCCCCEEECHHHHHHHHCCCCCCEEEECCCCCHHHHH RALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH RGAKQVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAE CCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHH TFSRIRRGDSVMSLFAES HHHHHHCCCHHHHHHHCC >Mature Secondary Structure SSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQ CCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEEE STCAPTNDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANML CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEHHHHHHHHH EIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRA HHCCCCEEEEEECCHHHHCCEEECCCCCEEECHHHHHHHHCCCCCCEEEECCCCCHHHHH RALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH RGAKQVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAE CCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHH TFSRIRRGDSVMSLFAES HHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]