Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718119

Identifier: 53718119

GI number: 53718119

Start: 520932

End: 521999

Strand: Reverse

Name: 53718119

Synonym: BPSL0480

Alternate gene names: NA

Gene position: 521999-520932 (Counterclockwise)

Preceding gene: 53718120

Following gene: 53718118

Centisome position: 12.81

GC content: 70.13

Gene sequence:

>1068_bases
ATGAGCGAGATCCGGGATTCGATCACCTTCCAGAACGCGGCGGCGCTCAAGGCGCAGGCGCGGCTCGGCCCCGGCGTGAT
CTGCGGCCTGCGCTCCGAGCGCGCGCCGCTGCCGCTCGTCGTCTCGCCGCACGGCGACAGCGCGCTCGCCGCGGACCGCG
ACGCGGCGCTCGCGTGGTTCGACGCGCGCCGCGCGGCATTCGACGCGCTGCTGCTCGAGCACGGCGGCCTGCTGCTGCGC
GGCTTCGCGGTGCCCGACACGCATGCGTTTCGCGCGCTGACCGACCGCTATCCGCCGCACGCGTTCGGCTACATCGCCGG
CGCGTCGCCGCGCAAGGCGATCGACGGCAACGTGTACGAATCGACGCATCTGCCCGCGCCGTACAAGCTGAGCCTGCATC
AGGAAAAGGCGTACATGTCGCACTATCCGCGGCTCATCGCGTTCTACTGCCGGCAGGCTGCGGCCGTCGGCGGCGAAACG
CCGCTGTCGGACATGCGCGCCGTCACGCGCCGCCTGCCCGCGCGCACGCTCGAGCGGTTCCGCGGCAAGGGCGTGATGTA
CCGGCGCAACTTCTCGGCGAAGCCGATGCCCGCGCACTTCAACCAGTTCTATCGGCGCTGGCAGGACGCGTTCATGACCG
ACGAGCGCGCCGAAGTCGAATCGCTCTGCCGCGCGACGCAGCTCGAATACGAGTGGCTGCCCGACGGCAGCCTCACGGTC
ACGCACGTGGGCCCGGCGACGGTCGTGCATCCGCGCACGGGCGAGGAAGTGTGGTTCAACCATGCGAGCACGCAGCACAT
CAACGCGCGCGTCGTGCACCCGACGATCCTGCGCGCGCTGCAGTCGTTCTACAAGACGCGCGCCGCGCTGCCGTACGACA
TCCGCTACGGCGACGGCACGCCGATGCCCGCCGAAGACCTCGATCCCGTCTACGACGCGATCGACGCCGAGGAGACCGCG
TTTCGCTGGCGCGAGCAGGACGTGCTGCTGCTCGACAACATCCTCGTCGCGCACGGACGCAACCCGTACAGCGGCCAGCG
CGACATCCAGGTCGCGATGATGGACTGA

Upstream 100 bases:

>100_bases
CGGCGGCGGGCCTCGCCGAGCACGCGAGCGTGACGAGCCCGCCGTTCGGCCTGGGCGCGCTCGGCTTCGAAATTCTGCTC
ACCAAGCCGGGAGAACCGTC

Downstream 100 bases:

>100_bases
ATGCGATGAGCCCTGTTCCGTTTCCGGCCGGCGAGGCCGGCGAAGCCCTCGAAGGCGCGCAGACCGCCGAAGCGGTTGAA
GCGGCTGAAGCAATGGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein; Regulatory Protein B; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Amino Acid Adenylation Domain-Containing Protein; Pyoverdine Biosynthesis Regulatory Gene; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; NRPS-Like Protein; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase; Syrp Like Protein Albicidin Biosynthesis Regulation; Regulatory Protein SyrP-Like; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Syringomycin Synthesis Regulator SyrP

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWFDARRAAFDALLLEHGGLLLR
GFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYESTHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGET
PLSDMRAVTRRLPARTLERFRGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV
THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGTPMPAEDLDPVYDAIDAEETA
FRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD

Sequences:

>Translated_355_residues
MSEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWFDARRAAFDALLLEHGGLLLR
GFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYESTHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGET
PLSDMRAVTRRLPARTLERFRGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV
THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGTPMPAEDLDPVYDAIDAEETA
FRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD
>Mature_354_residues
SEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWFDARRAAFDALLLEHGGLLLRG
FAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYESTHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGETP
LSDMRAVTRRLPARTLERFRGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTVT
HVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGTPMPAEDLDPVYDAIDAEETAF
RWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39873; Mature: 39741

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWF
CCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHH
DARRAAFDALLLEHGGLLLRGFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYE
HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEE
STHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGETPLSDMRAVTRRLPARTLERF
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
RGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCEEE
THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGT
EECCCEEEECCCCCCHHEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCC
PMPAEDLDPVYDAIDAEETAFRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD
CCCHHHCCHHHHHCCCHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
SEIRDSITFQNAAALKAQARLGPGVICGLRSERAPLPLVVSPHGDSALAADRDAALAWF
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHH
DARRAAFDALLLEHGGLLLRGFAVPDTHAFRALTDRYPPHAFGYIAGASPRKAIDGNVYE
HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEE
STHLPAPYKLSLHQEKAYMSHYPRLIAFYCRQAAAVGGETPLSDMRAVTRRLPARTLERF
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
RGKGVMYRRNFSAKPMPAHFNQFYRRWQDAFMTDERAEVESLCRATQLEYEWLPDGSLTV
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCEEE
THVGPATVVHPRTGEEVWFNHASTQHINARVVHPTILRALQSFYKTRAALPYDIRYGDGT
EECCCEEEECCCCCCHHEECCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCC
PMPAEDLDPVYDAIDAEETAFRWREQDVLLLDNILVAHGRNPYSGQRDIQVAMMD
CCCHHHCCHHHHHCCCHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA