| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717934
Identifier: 53717934
GI number: 53717934
Start: 305245
End: 306513
Strand: Reverse
Name: 53717934
Synonym: BPSL0293
Alternate gene names: NA
Gene position: 306513-305245 (Counterclockwise)
Preceding gene: 53717935
Following gene: 53717933
Centisome position: 7.52
GC content: 72.03
Gene sequence:
>1269_bases GTGTCCGTCGAAGGCCGCGCGATGAAAGCGCTCGCGTGGCTCACCGGCGCGGTCCTTGCGCTGCTCGCGGCCGAGCTGAT CTCGTTCGGCGACATCGGCCGCTTCGTCACGCTGCTCGCCGCGTTGCTCGCCGCGCTATGCGCGCTCGCGGCCGCGTTCG GCTGCGTGTACACGCTCGTCGCCGCCGCGCTCACGCACCGTTTTTTCGCGCGTGCGCCACGCGAGCCGCACGCGTGCCCG CCCGTCACGATCGTCAAGCCGTTGCACGGCGTCGAGCGGACGCTGTTCGCGAACCTCGCGAGCTTTTGCGAGCAGCGCTA CGACGGGCCGATCCAGTTCCTGTTCGGCGTGCACGATCGCGACGATCCCGCGCTGCGCGCCGTCGACGCGCTGCGCACCG CGTTTCCCCGCGCGCACGTGACGATCGTCGCCGACGCCCGGCTGTACGGGCCGAACCGCAAGATCGCGAACCTCGTCAAC ATGCTGCCCGCCGCCGCGCATGACGTGCTGATCTTCGCGGACAGCGACGTGAGCGTCGGCCCCGACTACGTACGGCATAT CGTCGGCGAGCTCGGCGAGCCGGGCGTCGGGCTCGTGACCTGCGTCTATCGCGGCCGCCCGGACCCGGGCTTCTGGCCGC GCGTCGAGGCGCTCGTCACCAGCCATCAGTTCCTGCCGGGCGTGGTGACGGGCCTCGCGCTGAAGCTCGCGCGGCCGTGT TTCGGCCAGACGATCGCGATGCGCCGCGCCATGCTCGACGCGATCGGCGGCCTCGCGCAGTTCGCCCATCACCTCGCCGA GGATCACGCGATCGGCGAAGCCGTGCGCGCGCGCGGCGCGCGCGTCGTCGTGCCGCCGTTCGCGGTCGAGCACGGCTGCG TCGAGACGCGCGTCGCGCAGCTCGTCGAACACGAATTGCGCTGGAGCCGCACGATCCGCGCGGTCGACCCGCGCGGCCAT CTGGGCTCGCTGCTCACGCATCCGCTCGCGCTCGCGCTGCTCGCCGGCGTGCTGTCGAGCGGCGCCGCGTGGGCGTGGCC GCTCGTGCCTGCCGCACTCGTCGCGCGCGTCGCCGCGAAACGCATCGTCGATCGCGCGACGAAGCGGCCGGTGCGCGACC TGTGGCTGCTGCCGCTCGCGGATCTGATCGCCTTCGGCATCTTCGTCGCGAGCTTCTCGTCGTCGCGCGTGATCTGGCGC GGCTTCAGCTTCGACGTCGATCGCGACGGCCGCCTATGCCCCGCGCCGGAAAAACGCCCGAATGCCTGA
Upstream 100 bases:
>100_bases CGTCGCACTCACGCGGAGCCATCAGCTTGTTCTGTCTCGATTTCGCAGCACCACGCCGCGATCGCCGGATCGATCGCGCG GCGGCCGTCCGTGCGCGGTT
Downstream 100 bases:
>100_bases CCGGCATCGCGCATCGAACACGCCTTTCTTCGTCATGCAAAACGAACCCCAGCGAACGCGAAGCGACGCGCACACGCCAC GATTGATCAAGCATGCGGGA
Product: putative glucosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Syl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Putatiave Glycosyltransferase
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSVEGRAMKALAWLTGAVLALLAAELISFGDIGRFVTLLAALLAALCALAAAFGCVYTLVAAALTHRFFARAPREPHACP PVTIVKPLHGVERTLFANLASFCEQRYDGPIQFLFGVHDRDDPALRAVDALRTAFPRAHVTIVADARLYGPNRKIANLVN MLPAAAHDVLIFADSDVSVGPDYVRHIVGELGEPGVGLVTCVYRGRPDPGFWPRVEALVTSHQFLPGVVTGLALKLARPC FGQTIAMRRAMLDAIGGLAQFAHHLAEDHAIGEAVRARGARVVVPPFAVEHGCVETRVAQLVEHELRWSRTIRAVDPRGH LGSLLTHPLALALLAGVLSSGAAWAWPLVPAALVARVAAKRIVDRATKRPVRDLWLLPLADLIAFGIFVASFSSSRVIWR GFSFDVDRDGRLCPAPEKRPNA
Sequences:
>Translated_422_residues MSVEGRAMKALAWLTGAVLALLAAELISFGDIGRFVTLLAALLAALCALAAAFGCVYTLVAAALTHRFFARAPREPHACP PVTIVKPLHGVERTLFANLASFCEQRYDGPIQFLFGVHDRDDPALRAVDALRTAFPRAHVTIVADARLYGPNRKIANLVN MLPAAAHDVLIFADSDVSVGPDYVRHIVGELGEPGVGLVTCVYRGRPDPGFWPRVEALVTSHQFLPGVVTGLALKLARPC FGQTIAMRRAMLDAIGGLAQFAHHLAEDHAIGEAVRARGARVVVPPFAVEHGCVETRVAQLVEHELRWSRTIRAVDPRGH LGSLLTHPLALALLAGVLSSGAAWAWPLVPAALVARVAAKRIVDRATKRPVRDLWLLPLADLIAFGIFVASFSSSRVIWR GFSFDVDRDGRLCPAPEKRPNA >Mature_421_residues SVEGRAMKALAWLTGAVLALLAAELISFGDIGRFVTLLAALLAALCALAAAFGCVYTLVAAALTHRFFARAPREPHACPP VTIVKPLHGVERTLFANLASFCEQRYDGPIQFLFGVHDRDDPALRAVDALRTAFPRAHVTIVADARLYGPNRKIANLVNM LPAAAHDVLIFADSDVSVGPDYVRHIVGELGEPGVGLVTCVYRGRPDPGFWPRVEALVTSHQFLPGVVTGLALKLARPCF GQTIAMRRAMLDAIGGLAQFAHHLAEDHAIGEAVRARGARVVVPPFAVEHGCVETRVAQLVEHELRWSRTIRAVDPRGHL GSLLTHPLALALLAGVLSSGAAWAWPLVPAALVARVAAKRIVDRATKRPVRDLWLLPLADLIAFGIFVASFSSSRVIWRG FSFDVDRDGRLCPAPEKRPNA
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=275, Percent_Identity=27.6363636363636, Blast_Score=105, Evalue=8e-23, Organism=Caenorhabditis elegans, GI25147526, Length=282, Percent_Identity=25.531914893617, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32566973, Length=404, Percent_Identity=22.2772277227723, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI25149574, Length=383, Percent_Identity=21.4099216710183, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564728, Length=383, Percent_Identity=21.4099216710183, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25149577, Length=383, Percent_Identity=21.4099216710183, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25149580, Length=284, Percent_Identity=24.2957746478873, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24657569, Length=285, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45495; Mature: 45363
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEGRAMKALAWLTGAVLALLAAELISFGDIGRFVTLLAALLAALCALAAAFGCVYTLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALTHRFFARAPREPHACPPVTIVKPLHGVERTLFANLASFCEQRYDGPIQFLFGVHDR HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC DDPALRAVDALRTAFPRAHVTIVADARLYGPNRKIANLVNMLPAAAHDVLIFADSDVSVG CCHHHHHHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCC PDYVRHIVGELGEPGVGLVTCVYRGRPDPGFWPRVEALVTSHQFLPGVVTGLALKLARPC HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGQTIAMRRAMLDAIGGLAQFAHHLAEDHAIGEAVRARGARVVVPPFAVEHGCVETRVAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH LVEHELRWSRTIRAVDPRGHLGSLLTHPLALALLAGVLSSGAAWAWPLVPAALVARVAAK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RIVDRATKRPVRDLWLLPLADLIAFGIFVASFSSSRVIWRGFSFDVDRDGRLCPAPEKRP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC NA CC >Mature Secondary Structure SVEGRAMKALAWLTGAVLALLAAELISFGDIGRFVTLLAALLAALCALAAAFGCVYTLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALTHRFFARAPREPHACPPVTIVKPLHGVERTLFANLASFCEQRYDGPIQFLFGVHDR HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC DDPALRAVDALRTAFPRAHVTIVADARLYGPNRKIANLVNMLPAAAHDVLIFADSDVSVG CCHHHHHHHHHHHHCCCCEEEEEECCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCC PDYVRHIVGELGEPGVGLVTCVYRGRPDPGFWPRVEALVTSHQFLPGVVTGLALKLARPC HHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGQTIAMRRAMLDAIGGLAQFAHHLAEDHAIGEAVRARGARVVVPPFAVEHGCVETRVAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH LVEHELRWSRTIRAVDPRGHLGSLLTHPLALALLAGVLSSGAAWAWPLVPAALVARVAAK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RIVDRATKRPVRDLWLLPLADLIAFGIFVASFSSSRVIWRGFSFDVDRDGRLCPAPEKRP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC NA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA