| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717933
Identifier: 53717933
GI number: 53717933
Start: 304182
End: 305252
Strand: Reverse
Name: 53717933
Synonym: BPSL0292
Alternate gene names: NA
Gene position: 305252-304182 (Counterclockwise)
Preceding gene: 53717934
Following gene: 53717932
Centisome position: 7.49
GC content: 69.56
Gene sequence:
>1071_bases ATGCCTGACCGGCATCGCGCATCGAACACGCCTTTCTTCGTCATGCAAAACGAACCCCAGCGAACGCGAAGCGACGCGCA CACGCCACGATTGATCAAGCATGCGGGACGCATCGCCGCGCTCGCGGGGCTCGCGATCTCGCTCTGGCTCGTCGCGCGCG ACGATCCGCACGCGGTGCTGGCGCTGCTGCGCGTGGCGGGGATCGGCCTCGTCGTCGCGGCCGCGTCGCACCTGCTGCCG ATGCTCGCGAACGCGAAGGACTGGCAAACGCTGATCGCGCCGCGCTGCCGGCCGAGCCTGCCGGCGATGCTGCGGCTCGT GTGGATTCGCGAATCGGTCAACGGACTGCTGCCCGTCGCACGCATCGGCGGCGAGTTCGCGTCGTTTCGCCTGCTGCGCG CGCACGGCCTGACAGCACCCGCGGCGGTAGCCAGCCTCGTGTCGGACATGCAGCTCACGCTGATCAGCCAGGCGCTTTTC GCGCTCGCGGGCGTCGGCTATCTGCTCGTGCATGCGACGTCGGACACCGCGCGCGTAGCCGGCATGTTCGCGTGGGGGCT AGCCGTGCTCGCGCCGCTGCTGCTCCTGTTCGCACTCGTCCAGCATGCGAAGCCGTTCGAACGCGCGATGCACGCGCTCA ATCGCGTCGCGGGCGGCCAGCTCGCGTCGCTCGTCGAGCGCTCCGCGCAGATCGACGACGCGCTGAAAGCCGTCTGGCGA CAGCGCGGCACCGTCGTGCGCTATCTGTTCTTCTGGCAGCCGCTGCAACATCTCGCGACGTCGCTCGAAATCTGGCTCGC GCTGCATTTCCTCGGCGCGTCCGTTTCGCTCGTCGACGCGCTCGTGATCGAAGCGCTGATCCAGGCGCTCAGCAGCGCCG CGTTCTTCGTGCCGGGCGGGCTCGGCGTGCAGGAAGGCGGCTTCGTGCTGATCGGCGGCGCGCTCGGGCTCGATCCGGCG ACGTCGCTCGGGCTCGCGGGTGCGCGACGCATCCGCGATCTGCTGATCTTCGTGCCCGGCCTGCTCGCATGGCAGCACGC GGAAGCATCGGTTGCGGCCAGCACGCCGTGA
Upstream 100 bases:
>100_bases TTCGTCGCGAGCTTCTCGTCGTCGCGCGTGATCTGGCGCGGCTTCAGCTTCGACGTCGATCGCGACGGCCGCCTATGCCC CGCGCCGGAAAAACGCCCGA
Downstream 100 bases:
>100_bases GCGCGCGCCGCGCAATGCGCCGCGATTCGCACGAGCGCCGTCACGCCATTTTCAACTTCCGCATGCATGATCGGCTCGGG CCCAACGGCTCGCCGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPDRHRASNTPFFVMQNEPQRTRSDAHTPRLIKHAGRIAALAGLAISLWLVARDDPHAVLALLRVAGIGLVVAAASHLLP MLANAKDWQTLIAPRCRPSLPAMLRLVWIRESVNGLLPVARIGGEFASFRLLRAHGLTAPAAVASLVSDMQLTLISQALF ALAGVGYLLVHATSDTARVAGMFAWGLAVLAPLLLLFALVQHAKPFERAMHALNRVAGGQLASLVERSAQIDDALKAVWR QRGTVVRYLFFWQPLQHLATSLEIWLALHFLGASVSLVDALVIEALIQALSSAAFFVPGGLGVQEGGFVLIGGALGLDPA TSLGLAGARRIRDLLIFVPGLLAWQHAEASVAASTP
Sequences:
>Translated_356_residues MPDRHRASNTPFFVMQNEPQRTRSDAHTPRLIKHAGRIAALAGLAISLWLVARDDPHAVLALLRVAGIGLVVAAASHLLP MLANAKDWQTLIAPRCRPSLPAMLRLVWIRESVNGLLPVARIGGEFASFRLLRAHGLTAPAAVASLVSDMQLTLISQALF ALAGVGYLLVHATSDTARVAGMFAWGLAVLAPLLLLFALVQHAKPFERAMHALNRVAGGQLASLVERSAQIDDALKAVWR QRGTVVRYLFFWQPLQHLATSLEIWLALHFLGASVSLVDALVIEALIQALSSAAFFVPGGLGVQEGGFVLIGGALGLDPA TSLGLAGARRIRDLLIFVPGLLAWQHAEASVAASTP >Mature_355_residues PDRHRASNTPFFVMQNEPQRTRSDAHTPRLIKHAGRIAALAGLAISLWLVARDDPHAVLALLRVAGIGLVVAAASHLLPM LANAKDWQTLIAPRCRPSLPAMLRLVWIRESVNGLLPVARIGGEFASFRLLRAHGLTAPAAVASLVSDMQLTLISQALFA LAGVGYLLVHATSDTARVAGMFAWGLAVLAPLLLLFALVQHAKPFERAMHALNRVAGGQLASLVERSAQIDDALKAVWRQ RGTVVRYLFFWQPLQHLATSLEIWLALHFLGASVSLVDALVIEALIQALSSAAFFVPGGLGVQEGGFVLIGGALGLDPAT SLGLAGARRIRDLLIFVPGLLAWQHAEASVAASTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37991; Mature: 37860
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRHRASNTPFFVMQNEPQRTRSDAHTPRLIKHAGRIAALAGLAISLWLVARDDPHAVL CCCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHH ALLRVAGIGLVVAAASHLLPMLANAKDWQTLIAPRCRPSLPAMLRLVWIRESVNGLLPVA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH RIGGEFASFRLLRAHGLTAPAAVASLVSDMQLTLISQALFALAGVGYLLVHATSDTARVA HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH GMFAWGLAVLAPLLLLFALVQHAKPFERAMHALNRVAGGQLASLVERSAQIDDALKAVWR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH QRGTVVRYLFFWQPLQHLATSLEIWLALHFLGASVSLVDALVIEALIQALSSAAFFVPGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCC LGVQEGGFVLIGGALGLDPATSLGLAGARRIRDLLIFVPGLLAWQHAEASVAASTP CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PDRHRASNTPFFVMQNEPQRTRSDAHTPRLIKHAGRIAALAGLAISLWLVARDDPHAVL CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHH ALLRVAGIGLVVAAASHLLPMLANAKDWQTLIAPRCRPSLPAMLRLVWIRESVNGLLPVA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH RIGGEFASFRLLRAHGLTAPAAVASLVSDMQLTLISQALFALAGVGYLLVHATSDTARVA HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH GMFAWGLAVLAPLLLLFALVQHAKPFERAMHALNRVAGGQLASLVERSAQIDDALKAVWR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH QRGTVVRYLFFWQPLQHLATSLEIWLALHFLGASVSLVDALVIEALIQALSSAAFFVPGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCC LGVQEGGFVLIGGALGLDPATSLGLAGARRIRDLLIFVPGLLAWQHAEASVAASTP CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA