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The map label for this gene is oprB [H]

Identifier: 53717935

GI number: 53717935

Start: 306895

End: 308424

Strand: Reverse

Name: oprB [H]

Synonym: BPSL0294

Alternate gene names: 53717935

Gene position: 308424-306895 (Counterclockwise)

Preceding gene: 53717943

Following gene: 53717934

Centisome position: 7.57

GC content: 69.22

Gene sequence:

>1530_bases
ATGCAACGATTCGTCATGAAGAAGAAGACCCTCCATCAAATGCTCGTCAAATCCGGCGTCGCCTCCGGCCTGCCGTTGTT
GCTGTCGCTCGGCATCGTGCAGCCCGCGCTCGCGCAGGCGTCGAGCCCCGCGGCGGCCCCCGCCGAGAACGCCGCGCCGC
CGGCACCCGCCACGCGGGCCCCGGATGGCGTGCCCGGCGGAAACGGCGCGACAGCCGCGCAGACGGATGCCGCCCCCACC
GGCTTCTGGGATCGCTCGAACCTGTTCGGCGACATGGGCGGCCTGCGCACCAAGCTCGGCGATCACGGGATCACGCTGAA
TCTGCAGGAAACGAGCGAGTACCTGCGCAACCTGTCGGGCGGCACAAGCCGCGGCGGCGCCTATGACGGCCTCACGCAAT
TCGGCTTCAGCGTCGACACCGAAAAGGCGATCGGGCTGCCGGGCGGCACGTTCAACGTGTCGGGCCTGCAGATTCACGGC
ACGAGCCTCACGGCGCGCAACCTGCAGTTGCTGCAGACGGCAAGCGGCATCGAGGCCGAGGCCACGACGCGCCTCTGGGA
GCTGTGGTACCAGCAGTCGTTCGCGAACGGCCGCGCCGACGTGAAGGTCGGCCAGCAAAGCCTCGACCAGGAATTCATGG
TGAGCCAGTACGCGAGCACGTTCATCAACGCGACGTTCGGCTGGCCCGTGCTGCCCGCCGTCGACATGCCGGCGGGCGGC
CCCGCCTATCCGCTGTCGTCGCTCGGCGTGCGGCTGCGCGCGAAGCCATCCGATGCATGGACCGTGATGGCGGGCGTGTT
CGACGGCAATCCGGCGGGCGGCGTGGGCGACGCGCAACAGCTCAATCGGCACGGCACGAATTTCAACCTGCGCAACGGCG
CGCTCTTCATCGGCGAGCTCCAGTACGCGCTCAACGCGCCGCCCGCCGATCCGAAGGCGCCGCAGGCGGGGCTGCCCGGC
ATGTACAAGCTCGGTGTCTGGTACAACTCCGAGCGCTTCGCCGATCCGCGCTATGACACGAACGGCGTGCCGCTCGCCGA
TCCGGCGAGCAACGGCGTCGCGGCGACGCATCGCGGCAACTACGGCTTCTATGCGGTCGCGGACCAGATGGTATGGCGGC
CGGGCGCGGACAGCCCGCGCTCGCTGAACGTGTTCGCGCGCGTGATGGGCGCGCCCGGCGATCGCAACGCCGTCGACTTC
ACGCTGAACGCGGGCGTCACGCTCAAGGCGCCGTTCGCCGGACGCGACAACGACACGGCGGGGCTTGCCGTCAGCTACGC
GAAGATCGGTTCGCGCGCGCGCGGCGCCGACGGCGACACCGGCGTGTTCCAGACGCCCGGCTATCCGGTGCGCCGCGCGG
AAACGCTGATCGAGGCGACCTACCAGTATCAGGTGACGCCGTGGTGGCAACTGCAGGGGGATTTCCAGTACGCATTCCGG
CCGGGCGGCGGCATTCCGAACCCGAACGAGCCGGGCTCGCGTATCGGCAACGAAGCGATCGTCGGCGTACGCACGACGAT
CACGTTCTGA

Upstream 100 bases:

>100_bases
GGTGGTTCTCGTAAGCGCTCGCCGGGCCCGCCGGTTCGCCGCCCCCGGCGGGCAGCAACAGAACGCGGCAAGCGGGCGAT
CACATCGGCCGTCAACCTCC

Downstream 100 bases:

>100_bases
ACCGTTTCGCTTTCCTCACCTTTCACGCCTTTCATCGCCCGCGCCGCGCGCATGCCGTCGACGACGGCACCGCGCGCGCC
GGCCGCGCGGTCAAATCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MQRFVMKKKTLHQMLVKSGVASGLPLLLSLGIVQPALAQASSPAAAPAENAAPPAPATRAPDGVPGGNGATAAQTDAAPT
GFWDRSNLFGDMGGLRTKLGDHGITLNLQETSEYLRNLSGGTSRGGAYDGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHG
TSLTARNLQLLQTASGIEAEATTRLWELWYQQSFANGRADVKVGQQSLDQEFMVSQYASTFINATFGWPVLPAVDMPAGG
PAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGELQYALNAPPADPKAPQAGLPG
MYKLGVWYNSERFADPRYDTNGVPLADPASNGVAATHRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNAVDF
TLNAGVTLKAPFAGRDNDTAGLAVSYAKIGSRARGADGDTGVFQTPGYPVRRAETLIEATYQYQVTPWWQLQGDFQYAFR
PGGGIPNPNEPGSRIGNEAIVGVRTTITF

Sequences:

>Translated_509_residues
MQRFVMKKKTLHQMLVKSGVASGLPLLLSLGIVQPALAQASSPAAAPAENAAPPAPATRAPDGVPGGNGATAAQTDAAPT
GFWDRSNLFGDMGGLRTKLGDHGITLNLQETSEYLRNLSGGTSRGGAYDGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHG
TSLTARNLQLLQTASGIEAEATTRLWELWYQQSFANGRADVKVGQQSLDQEFMVSQYASTFINATFGWPVLPAVDMPAGG
PAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGELQYALNAPPADPKAPQAGLPG
MYKLGVWYNSERFADPRYDTNGVPLADPASNGVAATHRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNAVDF
TLNAGVTLKAPFAGRDNDTAGLAVSYAKIGSRARGADGDTGVFQTPGYPVRRAETLIEATYQYQVTPWWQLQGDFQYAFR
PGGGIPNPNEPGSRIGNEAIVGVRTTITF
>Mature_509_residues
MQRFVMKKKTLHQMLVKSGVASGLPLLLSLGIVQPALAQASSPAAAPAENAAPPAPATRAPDGVPGGNGATAAQTDAAPT
GFWDRSNLFGDMGGLRTKLGDHGITLNLQETSEYLRNLSGGTSRGGAYDGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHG
TSLTARNLQLLQTASGIEAEATTRLWELWYQQSFANGRADVKVGQQSLDQEFMVSQYASTFINATFGWPVLPAVDMPAGG
PAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGELQYALNAPPADPKAPQAGLPG
MYKLGVWYNSERFADPRYDTNGVPLADPASNGVAATHRGNYGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNAVDF
TLNAGVTLKAPFAGRDNDTAGLAVSYAKIGSRARGADGDTGVFQTPGYPVRRAETLIEATYQYQVTPWWQLQGDFQYAFR
PGGGIPNPNEPGSRIGNEAIVGVRTTITF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 53742; Mature: 53742

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFVMKKKTLHQMLVKSGVASGLPLLLSLGIVQPALAQASSPAAAPAENAAPPAPATRA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDGVPGGNGATAAQTDAAPTGFWDRSNLFGDMGGLRTKLGDHGITLNLQETSEYLRNLSG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCEEEEEHHHHHHHHHCCC
GTSRGGAYDGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHGTSLTARNLQLLQTASGIEAE
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCEEEEECCEEEHHHHHHHHHCCCCCHH
ATTRLWELWYQQSFANGRADVKVGQQSLDQEFMVSQYASTFINATFGWPVLPAVDMPAGG
HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGEL
CCCCHHHCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCEEECCCEEEEEEE
QYALNAPPADPKAPQAGLPGMYKLGVWYNSERFADPRYDTNGVPLADPASNGVAATHRGN
HEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
YGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNAVDFTLNAGVTLKAPFAGRDNDTA
CCEEEEECHHEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCC
GLAVSYAKIGSRARGADGDTGVFQTPGYPVRRAETLIEATYQYQVTPWWQLQGDFQYAFR
CEEEEHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHEEEEECEEEEECCCEEEEEE
PGGGIPNPNEPGSRIGNEAIVGVRTTITF
CCCCCCCCCCCHHHCCCCEEEEEEEEEEC
>Mature Secondary Structure
MQRFVMKKKTLHQMLVKSGVASGLPLLLSLGIVQPALAQASSPAAAPAENAAPPAPATRA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDGVPGGNGATAAQTDAAPTGFWDRSNLFGDMGGLRTKLGDHGITLNLQETSEYLRNLSG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCEEEEEHHHHHHHHHCCC
GTSRGGAYDGLTQFGFSVDTEKAIGLPGGTFNVSGLQIHGTSLTARNLQLLQTASGIEAE
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCEEEEECCEEEHHHHHHHHHCCCCCHH
ATTRLWELWYQQSFANGRADVKVGQQSLDQEFMVSQYASTFINATFGWPVLPAVDMPAGG
HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PAYPLSSLGVRLRAKPSDAWTVMAGVFDGNPAGGVGDAQQLNRHGTNFNLRNGALFIGEL
CCCCHHHCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHCCCCEEECCCEEEEEEE
QYALNAPPADPKAPQAGLPGMYKLGVWYNSERFADPRYDTNGVPLADPASNGVAATHRGN
HEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
YGFYAVADQMVWRPGADSPRSLNVFARVMGAPGDRNAVDFTLNAGVTLKAPFAGRDNDTA
CCEEEEECHHEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCC
GLAVSYAKIGSRARGADGDTGVFQTPGYPVRRAETLIEATYQYQVTPWWQLQGDFQYAFR
CEEEEHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHEEEEECEEEEECCCEEEEEE
PGGGIPNPNEPGSRIGNEAIVGVRTTITF
CCCCCCCCCCCHHHCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]