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The map label for this gene is 52842736

Identifier: 52842736

GI number: 52842736

Start: 2858107

End: 2859657

Strand: Direct

Name: 52842736

Synonym: lpg2528

Alternate gene names: NA

Gene position: 2858107-2859657 (Clockwise)

Preceding gene: 52842733

Following gene: 52842738

Centisome position: 84.12

GC content: 40.36

Gene sequence:

>1551_bases
ATGTCTCCACGGATTTGTTGCTATAACCAATACCCTGGCTTATATCAAGATTTTGATGCGATGCGGGAAGATTTGCAGCG
AATTCAGAAGATGGGTTTTAAGCAAGTTTGGGTCAATCCATTTTATACACCTTGTCAATATAATCCTGTCCCTAACATGG
CTAATCGTATTCATAGCCCTTATGCCATGCAGGATGAATCAATTTATCCACGCTATGCCAAGAATGATAAAAGCGTTCAG
CAATACACTGCAAAAGCAAATGAGCTTGGTTTAATGCCTGTATTTGATTTGGTCGCAAGACACCTGGCGGTAGATCATCG
TTTTGTGAATGGCGATAAATTTTTTCTTGAAAAATACAATATTGATACGAAAAAATGGTTTAAACGTCACCCCAATGGAA
ATTTGGTGATGCATAACATGGACGAAAATTATAATCCGTTGACCAATAATCCCTGGAGTGATGTGGCAACGTTTAACTAT
GATGATCCTGTCATTTGCGAACAAATCATCGAATATTATTGGAAACCATTTATCGAGCGAAATATTGAGTATCTTGGTTT
TCAGGGAATACGTATTGATGCCCCAGCCATGGTAAATAACAAGGTATTGTCTCGACTAACAGAAATCGCAAAGGAGGCTT
GCCAACGCAAATTTCAACATGCCCCGCTTATTATTGCAGAAACGATAGGCAGAGGTTATATGGAAGAAAATCTTGCTTTG
AAAGGTATTGTAACCCACACGATGAATAGTGTGTTCTGGATGCCGGGCCCCGAAGGTGGCTATGGTTATTCATATAACTT
ATGGCAACAGGATGACAATTGGTTTACTCAAAATAAAGGATTATTACAGCAGGTTGGTCCTACAATTGGTTTTCCTGGCT
CTCATGATGAGCCACGCTATATTCAGCAACTGGTGGAAAAAGGCATCCAGGATGATGAATTGCTTGCAAAACGCATGCGC
GAAAAACTGGCTGTCAGCGCATTTTGTTCTGATGGCGGTTGGATTTTACAATACGGTGATGAATATGGTGCTACCAAGCC
AGTAAACGTTTTTGATCCAACCCCTGTTGAATATCATAAACAAAGCCATCTGAGACGATTTGATCTGTCAGACTATATCT
CTGAAATTAATACAACACTGGCCCAGCTACCCAATCCTCACTTCCCCGAATGGGCGCAGCGGGTCTTTCTTCCGAATCAT
CCAGATTTGGTAACCTTTATTGTTCACCAGGGTTGGGGTTATACTGGAACCTCATTCGTTATTGCGACCAACACCGATCC
CTCTCAGCAAATCCAATTAACAGAAAAAGAACTTGGAGAAATAATGCTGGCAAATGGCCGAAATAATACGACTGAAAAAC
AGATAAAACCACAAGTGCTTTATTTATGTGGCACAGTTCGCGCATCACCTGAATTGAAAAAAGAGATCCAAATTGTTACA
TCCAGACCAGCTACAAGTGAAAAGTCCATCCATTTTTTCCAGAGTCATCCTGAAGAAAAGCAAATGAGCGAAAAACTGCC
TTTAGAGAAAACACCACCTAAATTTAAATAA

Upstream 100 bases:

>100_bases
GCATGCATAGGAATTAAATGATTTGAAACAATACAATAAGATCGAATTTAATACTTCTACTATACTTCATAGACATAGAA
ACAGAAATTGAGAAGTCAAC

Downstream 100 bases:

>100_bases
TATTTACCGGAGATATGCATTGATATTAATTACAGCCTAGAAAATCATTGCGGTTGCTATTTTGCTTCCTCACCAATTAA
GTCACCACTTGATAAGAAAG

Product: alpha-amylase, putative

Products: D-glucose; cholesterol

Alternate protein names: Alpha-Amylase; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain Family; Alpha-Amylase-Related Protein; Alpha Amylase Catalytic Domain Subfamily

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSPYAMQDESIYPRYAKNDKSVQ
QYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYNIDTKKWFKRHPNGNLVMHNMDENYNPLTNNPWSDVATFNY
DDPVICEQIIEYYWKPFIERNIEYLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQHAPLIIAETIGRGYMEENLAL
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVGPTIGFPGSHDEPRYIQQLVEKGIQDDELLAKRMR
EKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHKQSHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNH
PDLVTFIVHQGWGYTGTSFVIATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQIKPQVLYLCGTVRASPELKKEIQIVT
SRPATSEKSIHFFQSHPEEKQMSEKLPLEKTPPKFK

Sequences:

>Translated_516_residues
MSPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSPYAMQDESIYPRYAKNDKSVQ
QYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYNIDTKKWFKRHPNGNLVMHNMDENYNPLTNNPWSDVATFNY
DDPVICEQIIEYYWKPFIERNIEYLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQHAPLIIAETIGRGYMEENLAL
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVGPTIGFPGSHDEPRYIQQLVEKGIQDDELLAKRMR
EKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHKQSHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNH
PDLVTFIVHQGWGYTGTSFVIATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQIKPQVLYLCGTVRASPELKKEIQIVT
SRPATSEKSIHFFQSHPEEKQMSEKLPLEKTPPKFK
>Mature_515_residues
SPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSPYAMQDESIYPRYAKNDKSVQQ
YTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYNIDTKKWFKRHPNGNLVMHNMDENYNPLTNNPWSDVATFNYD
DPVICEQIIEYYWKPFIERNIEYLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQHAPLIIAETIGRGYMEENLALK
GIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVGPTIGFPGSHDEPRYIQQLVEKGIQDDELLAKRMRE
KLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHKQSHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNHP
DLVTFIVHQGWGYTGTSFVIATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQIKPQVLYLCGTVRASPELKKEIQIVTS
RPATSEKSIHFFQSHPEEKQMSEKLPLEKTPPKFK

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.1

Molecular weight: Translated: 59804; Mature: 59672

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSP
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCC
YAMQDESIYPRYAKNDKSVQQYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCEEEEEECC
IDTKKWFKRHPNGNLVMHNMDENYNPLTNNPWSDVATFNYDDPVICEQIIEYYWKPFIER
CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHC
NIEYLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQHAPLIIAETIGRGYMEENLAL
CHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHCCHH
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVGPTIGFPGSHDEPRY
HHHHHHHCCCEEECCCCCCCCCCEEECEECCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH
IQQLVEKGIQDDELLAKRMREKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHK
HHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHH
QSHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNHPDLVTFIVHQGWGYTGTSFV
HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEE
IATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQIKPQVLYLCGTVRASPELKKEIQIVT
EEECCCCCHHEEECHHHHCCEEEECCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHEEEE
SRPATSEKSIHFFQSHPEEKQMSEKLPLEKTPPKFK
CCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SPRICCYNQYPGLYQDFDAMREDLQRIQKMGFKQVWVNPFYTPCQYNPVPNMANRIHSP
CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCC
YAMQDESIYPRYAKNDKSVQQYTAKANELGLMPVFDLVARHLAVDHRFVNGDKFFLEKYN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCEEEEEECC
IDTKKWFKRHPNGNLVMHNMDENYNPLTNNPWSDVATFNYDDPVICEQIIEYYWKPFIER
CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHC
NIEYLGFQGIRIDAPAMVNNKVLSRLTEIAKEACQRKFQHAPLIIAETIGRGYMEENLAL
CHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCHHHHCCHH
KGIVTHTMNSVFWMPGPEGGYGYSYNLWQQDDNWFTQNKGLLQQVGPTIGFPGSHDEPRY
HHHHHHHCCCEEECCCCCCCCCCEEECEECCCCCCCCCCCHHHHCCCCCCCCCCCCCHHH
IQQLVEKGIQDDELLAKRMREKLAVSAFCSDGGWILQYGDEYGATKPVNVFDPTPVEYHK
HHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHH
QSHLRRFDLSDYISEINTTLAQLPNPHFPEWAQRVFLPNHPDLVTFIVHQGWGYTGTSFV
HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEE
IATNTDPSQQIQLTEKELGEIMLANGRNNTTEKQIKPQVLYLCGTVRASPELKKEIQIVT
EEECCCCCHHEEECHHHHCCEEEECCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHEEEE
SRPATSEKSIHFFQSHPEEKQMSEKLPLEKTPPKFK
CCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; cholesteryl-beta-D-glucoside

Specific reaction: H2O + cholesteryl-beta-D-glucoside = D-glucose + cholesterol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA