Click here to switch to the map view.

The map label for this gene is 52842733

Identifier: 52842733

GI number: 52842733

Start: 2852975

End: 2854309

Strand: Direct

Name: 52842733

Synonym: lpg2525

Alternate gene names: NA

Gene position: 2852975-2854309 (Clockwise)

Preceding gene: 52842732

Following gene: 52842736

Centisome position: 83.97

GC content: 32.66

Gene sequence:

>1335_bases
ATGAAAGAAAAATACAAAAAGAGTCTATATATTCCAAATGAACTTCTTTTAGAAATTTTTGCGGATAAAAATTTAGACAT
TCAAAATATCATAGTTGTCAGCATGGTTTGTAAACTTTGGTATGAGTTATCACTTGATAATGCCGTTTGGAGGCCTTTAT
TTATCAAACGATTTTCCTATTCACCAACTTTAGCTAACCACTCAATCTTTAAAGAGGATTATCAAAAACAATTGGCTTTA
ACTCAAGCAATGAAAAAGAAATGTGAATCAAATCATGCATGTAGGAATGAGCCAGGATTACTAGAGGCTATTAGAGAAAA
AAACATTCCTTTGATCTACGCCTTATTTGAATCTGGCCATCGAATTATCATAGATAGTTTTCCTGATGGCGAACAACAGT
TTACTGAAGAAATGCTTGGTTTTTTATCAGAATGCGCTGAATTACCAAGTTCCTTATTGGCAAGAATTTTTAAACGTGGT
TTTTGCACAGCAGACATGGAGACCAGTGAGTTTTTGGCATTACATTTCATTGTTGCAGAAGCTGATGAAAAACTATTACA
AAAAATATTTAGAGCTCTAGGTGATGACTTATTATCAGTTAGCCGCTATTGTGATCTTTATGATAACAATTTTTTTAGCT
CTCTATTACATTTTCCTGTAGAACGATTTTCATTAGTACTGAGATTGCTCTACGAAACTTTAGGAAAAACAAAACTGAGT
ACTCTTTTAGTGTACCAAAACCATACTTACACTGATTGGAGTTGCATTCATTCTGCAAGTAGATGTGGTAGAGAATATTT
CTTCATTACTCTCAAATATCTTAAAAGGCAAGATTATCCTGTATTATTGAAAAAAGGATTAAATGATGAAGATATTCCTT
TATTCAATATTGCATATTGGGGCGATAAAGAGTCTTTATCTCACATTATTAACATTTTGGGAGCTGACGCAACAACGTTT
CTTAAATACAAGGACAATAAAGGACGTAACATCTTATTGCCCGCATTGTTGAGTGAAGATCATTCAACAGTTGAATTAAT
TGAAAAAGTGATGGGGATGGAATTCATTGATTTGTTACTTATGCAAGATACAAATGGCCGCGATATTTTGAGACGAGTCA
TGTTGCTTCAGGAACCTACAGTATTGAGACGCATCAATACAGTACTTAAACTATTACGTGATTATGATTGCCTGGACATT
GCTCAGGAGCTATATAGCAGTGATGAATTTACCCAACTCATATCTCAGAATTTATATATCAACCAGGATGAAACCATAGA
GTTATTCAATAAATATACAGAAGAAAAAACAAACAATTTTTGTTCTATTTTATAA

Upstream 100 bases:

>100_bases
ACTGACTCAAAAACAGCATAATTATTATGGTGGTACTTTATTATAATCTATTTTTGTTTATTATATGTCATTTGATTAAA
AATGATTTTTTTTAAACTAT

Downstream 100 bases:

>100_bases
AATTAGAATAAATATATGAACGTACTTTATCATTGAAGAAGATTCGAAGTTGCATCTCGAAATAATAGATGTATCCTGCC
AATTTAAAAATGCCTCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKEKYKKSLYIPNELLLEIFADKNLDIQNIIVVSMVCKLWYELSLDNAVWRPLFIKRFSYSPTLANHSIFKEDYQKQLAL
TQAMKKKCESNHACRNEPGLLEAIREKNIPLIYALFESGHRIIIDSFPDGEQQFTEEMLGFLSECAELPSSLLARIFKRG
FCTADMETSEFLALHFIVAEADEKLLQKIFRALGDDLLSVSRYCDLYDNNFFSSLLHFPVERFSLVLRLLYETLGKTKLS
TLLVYQNHTYTDWSCIHSASRCGREYFFITLKYLKRQDYPVLLKKGLNDEDIPLFNIAYWGDKESLSHIINILGADATTF
LKYKDNKGRNILLPALLSEDHSTVELIEKVMGMEFIDLLLMQDTNGRDILRRVMLLQEPTVLRRINTVLKLLRDYDCLDI
AQELYSSDEFTQLISQNLYINQDETIELFNKYTEEKTNNFCSIL

Sequences:

>Translated_444_residues
MKEKYKKSLYIPNELLLEIFADKNLDIQNIIVVSMVCKLWYELSLDNAVWRPLFIKRFSYSPTLANHSIFKEDYQKQLAL
TQAMKKKCESNHACRNEPGLLEAIREKNIPLIYALFESGHRIIIDSFPDGEQQFTEEMLGFLSECAELPSSLLARIFKRG
FCTADMETSEFLALHFIVAEADEKLLQKIFRALGDDLLSVSRYCDLYDNNFFSSLLHFPVERFSLVLRLLYETLGKTKLS
TLLVYQNHTYTDWSCIHSASRCGREYFFITLKYLKRQDYPVLLKKGLNDEDIPLFNIAYWGDKESLSHIINILGADATTF
LKYKDNKGRNILLPALLSEDHSTVELIEKVMGMEFIDLLLMQDTNGRDILRRVMLLQEPTVLRRINTVLKLLRDYDCLDI
AQELYSSDEFTQLISQNLYINQDETIELFNKYTEEKTNNFCSIL
>Mature_444_residues
MKEKYKKSLYIPNELLLEIFADKNLDIQNIIVVSMVCKLWYELSLDNAVWRPLFIKRFSYSPTLANHSIFKEDYQKQLAL
TQAMKKKCESNHACRNEPGLLEAIREKNIPLIYALFESGHRIIIDSFPDGEQQFTEEMLGFLSECAELPSSLLARIFKRG
FCTADMETSEFLALHFIVAEADEKLLQKIFRALGDDLLSVSRYCDLYDNNFFSSLLHFPVERFSLVLRLLYETLGKTKLS
TLLVYQNHTYTDWSCIHSASRCGREYFFITLKYLKRQDYPVLLKKGLNDEDIPLFNIAYWGDKESLSHIINILGADATTF
LKYKDNKGRNILLPALLSEDHSTVELIEKVMGMEFIDLLLMQDTNGRDILRRVMLLQEPTVLRRINTVLKLLRDYDCLDI
AQELYSSDEFTQLISQNLYINQDETIELFNKYTEEKTNNFCSIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51787; Mature: 51787

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKYKKSLYIPNELLLEIFADKNLDIQNIIVVSMVCKLWYELSLDNAVWRPLFIKRFSY
CCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
SPTLANHSIFKEDYQKQLALTQAMKKKCESNHACRNEPGLLEAIREKNIPLIYALFESGH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
RIIIDSFPDGEQQFTEEMLGFLSECAELPSSLLARIFKRGFCTADMETSEFLALHFIVAE
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ADEKLLQKIFRALGDDLLSVSRYCDLYDNNFFSSLLHFPVERFSLVLRLLYETLGKTKLS
HHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TLLVYQNHTYTDWSCIHSASRCGREYFFITLKYLKRQDYPVLLKKGLNDEDIPLFNIAYW
EEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEEEEC
GDKESLSHIINILGADATTFLKYKDNKGRNILLPALLSEDHSTVELIEKVMGMEFIDLLL
CCHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHH
MQDTNGRDILRRVMLLQEPTVLRRINTVLKLLRDYDCLDIAQELYSSDEFTQLISQNLYI
HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCC
NQDETIELFNKYTEEKTNNFCSIL
CCCHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MKEKYKKSLYIPNELLLEIFADKNLDIQNIIVVSMVCKLWYELSLDNAVWRPLFIKRFSY
CCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
SPTLANHSIFKEDYQKQLALTQAMKKKCESNHACRNEPGLLEAIREKNIPLIYALFESGH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
RIIIDSFPDGEQQFTEEMLGFLSECAELPSSLLARIFKRGFCTADMETSEFLALHFIVAE
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ADEKLLQKIFRALGDDLLSVSRYCDLYDNNFFSSLLHFPVERFSLVLRLLYETLGKTKLS
HHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TLLVYQNHTYTDWSCIHSASRCGREYFFITLKYLKRQDYPVLLKKGLNDEDIPLFNIAYW
EEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEEEEC
GDKESLSHIINILGADATTFLKYKDNKGRNILLPALLSEDHSTVELIEKVMGMEFIDLLL
CCHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHH
MQDTNGRDILRRVMLLQEPTVLRRINTVLKLLRDYDCLDIAQELYSSDEFTQLISQNLYI
HCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCC
NQDETIELFNKYTEEKTNNFCSIL
CCCHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA