Click here to switch to the map view.

The map label for this gene is yfgM [H]

Identifier: 52841773

GI number: 52841773

Start: 1707811

End: 1708485

Strand: Reverse

Name: yfgM [H]

Synonym: lpg1543

Alternate gene names: 52841773

Gene position: 1708485-1707811 (Counterclockwise)

Preceding gene: 52841774

Following gene: 52841772

Centisome position: 50.28

GC content: 34.67

Gene sequence:

>675_bases
ATGTCTGTTTACATGACGGAAGAAGAACAATTAGAGATTATAAAAAAATGGTGGAAACGATATGGCAATATGATAACTAT
TTTTTTATCAATAATGCTCCTGATTATCGCAGGGTACCGATATATGAATTGGCACAATGACAAGATAAAACAACAAGCAT
CTATTGCCTACGAAAATATGATGATTGCATTTTCCAATCAAAACATAAAGTCTGTTCGTTCCTATGCCAATGAATTAATT
AAGAATTATAACCATACTGTTTATGCTGATATAGCTCATATGACACTTGCAAAAATCTACGTAAATAAAAATAAGCTTGA
GCAAGCAAGAAATGAGTTAAAGGCTGTTGCATCGGAAAGCCAAATGACACCGCTAAGACAAATTGCCAAAATCCGCATTG
CACGTTTACTGGCGGCAGATAAAGCTTATACCAATGCATTAAATGAATTAAGTGCTGTTGAGGACGAAGCCTACTTGCCA
GTAATTAACGAACTGAAAGGGGATATTTATAGCGCCAAAGGCCAATATCAGGACGCAATGAATGCCTACCGGCTTGCAAT
AGACGAAGTAAGAACAAATGGAATGGGTAATTTATTTTTAGAAATGAAAACAAATGAGTTAGCAATTAAGACTCAATCTA
TGATTACTGATGATAAAAAGGTAAAAGCAGCTTAA

Upstream 100 bases:

>100_bases
TTAAAGATTTGAGAACTGAAATAGAACAAATATCAATACCGATGACCAAAATAAATGAATTTTTGCAAGATTATCTAGCT
TAAGGGCAGGAGAATATTAT

Downstream 100 bases:

>100_bases
TTTTATTATAAAGGTTTGTTTTTTATGAAGATTAGAATATTAGTTTTAATACTATGTGCCTTAACTCAAGGATGCACATA
TGTGGATGATTATATGCTCG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSVYMTEEEQLEIIKKWWKRYGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENMMIAFSNQNIKSVRSYANELI
KNYNHTVYADIAHMTLAKIYVNKNKLEQARNELKAVASESQMTPLRQIAKIRIARLLAADKAYTNALNELSAVEDEAYLP
VINELKGDIYSAKGQYQDAMNAYRLAIDEVRTNGMGNLFLEMKTNELAIKTQSMITDDKKVKAA

Sequences:

>Translated_224_residues
MSVYMTEEEQLEIIKKWWKRYGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENMMIAFSNQNIKSVRSYANELI
KNYNHTVYADIAHMTLAKIYVNKNKLEQARNELKAVASESQMTPLRQIAKIRIARLLAADKAYTNALNELSAVEDEAYLP
VINELKGDIYSAKGQYQDAMNAYRLAIDEVRTNGMGNLFLEMKTNELAIKTQSMITDDKKVKAA
>Mature_223_residues
SVYMTEEEQLEIIKKWWKRYGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENMMIAFSNQNIKSVRSYANELIK
NYNHTVYADIAHMTLAKIYVNKNKLEQARNELKAVASESQMTPLRQIAKIRIARLLAADKAYTNALNELSAVEDEAYLPV
INELKGDIYSAKGQYQDAMNAYRLAIDEVRTNGMGNLFLEMKTNELAIKTQSMITDDKKVKAA

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0070 family [H]

Homologues:

Organism=Escherichia coli, GI1788860, Length=209, Percent_Identity=26.7942583732057, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR011990 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 25825; Mature: 25694

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYMTEEEQLEIIKKWWKRYGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENM
CCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE
MIAFSNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVNKNKLEQARNELKAVASES
EEEECCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
QMTPLRQIAKIRIARLLAADKAYTNALNELSAVEDEAYLPVINELKGDIYSAKGQYQDAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCHHHHHH
NAYRLAIDEVRTNGMGNLFLEMKTNELAIKTQSMITDDKKVKAA
HHHHHHHHHHHCCCCCEEEEEEECCHHEEEHHHHHCCCCHHCCC
>Mature Secondary Structure 
SVYMTEEEQLEIIKKWWKRYGNMITIFLSIMLLIIAGYRYMNWHNDKIKQQASIAYENM
CEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHE
MIAFSNQNIKSVRSYANELIKNYNHTVYADIAHMTLAKIYVNKNKLEQARNELKAVASES
EEEECCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
QMTPLRQIAKIRIARLLAADKAYTNALNELSAVEDEAYLPVINELKGDIYSAKGQYQDAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCHHHHHH
NAYRLAIDEVRTNGMGNLFLEMKTNELAIKTQSMITDDKKVKAA
HHHHHHHHHHHCCCCCEEEEEEECCHHEEEHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9205837 [H]