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The map label for this gene is yfgL [H]

Identifier: 52841772

GI number: 52841772

Start: 1706632

End: 1707795

Strand: Reverse

Name: yfgL [H]

Synonym: lpg1542

Alternate gene names: 52841772

Gene position: 1707795-1706632 (Counterclockwise)

Preceding gene: 52841773

Following gene: 52841771

Centisome position: 50.26

GC content: 39.78

Gene sequence:

>1164_bases
TTGTTTTTTATGAAGATTAGAATATTAGTTTTAATACTATGTGCCTTAACTCAAGGATGCACATATGTGGATGATTATAT
GCTCGGTAAGGATAATACGCCCCAACCCAAAGAGCTAAAAGAAATTCAGCCCAAGGTTAAAATGGCACAAAGCTGGACAA
CTCCAGTTGGAAAGGCTCATAAAACAAATGAGTATTTAAATATCAAACCAGCTATTCGTGGCGATATAATTTATACTGCA
GATGCAAGTGGACTGGTTCAGGCAGTTAACAGGAAAGATGGTCAGATAAAGTGGTCTACCGCATTAAAAAATAATATAGT
TAGTGGACCAACTGTAGCTGCTGGTTATGTTGCTGTAGGAACTAATGCCTCCACATTGGTACTACTTAATCAATCGGACG
GAAAAGAGATATGGCAGAATAAAGTATCTGCTGAAGTATTAGCTCCTCCTGCTATCTCACATCAAAAGGTCATTGCAAAA
ACCATTGATGGTAAAGTGTATGCGATTGATGCGGTAAACGGCAAGCAACTGTGGGTTGCAGATCATGGCGCTCCCAGCCT
GGTGTTAAAAGCCAGCTCGTCCCCTATCATTGTCGACAATCTGGTTCTTGTCGGATTTTCCGATGGCAAATTAGATGCTT
TGGAATTACAGACCGGACGATTGATCTGGCAAAGAAGCATTGCTTATGGAACAGGAGCTAGTGATGTCGAACGTTTAGTT
GATATTGATTCTGACCCTATAATAAGCAATAACGTCGCCTATTTGGCAACTTATCAGGGATATGTTGGAGCACTATCACT
GTCTGATGGCCAATTCATATGGAGAAAGCCAGCATCTGTTTATAAAAATATGCTTTTAAGTCATAATAATCTGTATTTTA
CGGACAGCAATGATGTCTTGTGGTCTTTGAATAGTAGCACAGGACAGGTCAACTGGAAGCAAACCTCCCTAAAGGCAAGA
GGTCTTACTGCACCTGCATTAGTTGGAGGAAATTTAGCTGTTGGTGATAAAACAGGATATTTACATATCCTATCAACTCA
AACAGGTGAGTTACTTGGACGTTCTCAGCTTTCTGGTGGAGTAACAGTATCACCGAGTGTTTCTGGTAAAAATATGTATG
TATTAACCAATAATGGAATGCTCAATCAACTTTCAGTGAGCTAA

Upstream 100 bases:

>100_bases
TTTATTTTTAGAAATGAAAACAAATGAGTTAGCAATTAAGACTCAATCTATGATTACTGATGATAAAAAGGTAAAAGCAG
CTTAATTTTATTATAAAGGT

Downstream 100 bases:

>100_bases
TAAAATGATCCCTGTTATCGCTTTAGTTGGGCGTCCCAATGTTGGAAAGTCTACTTTGTTTAATAGAATTACTAAAACGC
AGGATGCTCTTGTCGCAGAT

Product: PQQ WD-40-like repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFFMKIRILVLILCALTQGCTYVDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTA
DASGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVAVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAK
TIDGKVYAIDAVNGKQLWVADHGAPSLVLKASSSPIIVDNLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLV
DIDSDPIISNNVAYLATYQGYVGALSLSDGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKAR
GLTAPALVGGNLAVGDKTGYLHILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLNQLSVS

Sequences:

>Translated_387_residues
MFFMKIRILVLILCALTQGCTYVDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTA
DASGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVAVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAK
TIDGKVYAIDAVNGKQLWVADHGAPSLVLKASSSPIIVDNLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLV
DIDSDPIISNNVAYLATYQGYVGALSLSDGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKAR
GLTAPALVGGNLAVGDKTGYLHILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLNQLSVS
>Mature_387_residues
MFFMKIRILVLILCALTQGCTYVDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAHKTNEYLNIKPAIRGDIIYTA
DASGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVAVGTNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAK
TIDGKVYAIDAVNGKQLWVADHGAPSLVLKASSSPIIVDNLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLV
DIDSDPIISNNVAYLATYQGYVGALSLSDGQFIWRKPASVYKNMLLSHNNLYFTDSNDVLWSLNSSTGQVNWKQTSLKAR
GLTAPALVGGNLAVGDKTGYLHILSTQTGELLGRSQLSGGVTVSPSVSGKNMYVLTNNGMLNQLSVS

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=377, Percent_Identity=30.5039787798408, Blast_Score=209, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 41655; Mature: 41655

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFMKIRILVLILCALTQGCTYVDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAH
CEEHHHHHHHHHHHHHHCCCCEECCEEECCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCC
KTNEYLNIKPAIRGDIIYTADASGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVAVG
CCCCEEEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEEEHHHCCCCCCCCEEEEEEEEC
TNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVA
CCCEEEEEEECCCCHHHHHHCCCCEEECCCCCCCHHHEEEECCCEEEEEEECCCCEEEEE
DHGAPSLVLKASSSPIIVDNLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLV
ECCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHH
DIDSDPIISNNVAYLATYQGYVGALSLSDGQFIWRKPASVYKNMLLSHNNLYFTDSNDVL
CCCCCCEECCCEEEEEEECCEEEEEEECCCCEEEECHHHHHHHHHHCCCCEEEECCCCEE
WSLNSSTGQVNWKQTSLKARGLTAPALVGGNLAVGDKTGYLHILSTQTGELLGRSQLSGG
EEECCCCCEEEEEECCEEECCCCCCEEECCEEEECCCCCEEEEEECCCHHHHHHHHCCCC
VTVSPSVSGKNMYVLTNNGMLNQLSVS
EEECCCCCCCEEEEEECCCCCEEEECC
>Mature Secondary Structure
MFFMKIRILVLILCALTQGCTYVDDYMLGKDNTPQPKELKEIQPKVKMAQSWTTPVGKAH
CEEHHHHHHHHHHHHHHCCCCEECCEEECCCCCCCCHHHHHHCHHHHHHHHCCCCCCCCC
KTNEYLNIKPAIRGDIIYTADASGLVQAVNRKDGQIKWSTALKNNIVSGPTVAAGYVAVG
CCCCEEEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEEEHHHCCCCCCCCEEEEEEEEC
TNASTLVLLNQSDGKEIWQNKVSAEVLAPPAISHQKVIAKTIDGKVYAIDAVNGKQLWVA
CCCEEEEEEECCCCHHHHHHCCCCEEECCCCCCCHHHEEEECCCEEEEEEECCCCEEEEE
DHGAPSLVLKASSSPIIVDNLVLVGFSDGKLDALELQTGRLIWQRSIAYGTGASDVERLV
ECCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHH
DIDSDPIISNNVAYLATYQGYVGALSLSDGQFIWRKPASVYKNMLLSHNNLYFTDSNDVL
CCCCCCEECCCEEEEEEECCEEEEEEECCCCEEEECHHHHHHHHHHCCCCEEEECCCCEE
WSLNSSTGQVNWKQTSLKARGLTAPALVGGNLAVGDKTGYLHILSTQTGELLGRSQLSGG
EEECCCCCEEEEEECCEEECCCCCCEEECCEEEECCCCCEEEEEECCCHHHHHHHHCCCC
VTVSPSVSGKNMYVLTNNGMLNQLSVS
EEECCCCCCCEEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]