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The map label for this gene is yfmM [H]

Identifier: 52787934

GI number: 52787934

Start: 4097983

End: 4099584

Strand: Direct

Name: yfmM [H]

Synonym: BLi04257

Alternate gene names: 52787934

Gene position: 4097983-4099584 (Clockwise)

Preceding gene: 52787932

Following gene: 52787939

Centisome position: 97.05

GC content: 49.38

Gene sequence:

>1602_bases
ATGCTTCACGCTGTTCTCTTTAGATGGCTTGTTTTTTCAAAAATAAGCCTGAAGGAGAGAATCATCATGAGTATTGTTCA
TGTAACGAATTTGACCCATATATATGGAGACCGCATGATCTTTCAAGACGCCGGGTTCCGCCTGCTGAAAGGGGAACATG
CCGGTCTTGTCGGTGCAAACGGAGCCGGAAAGTCGACATTGCTGCGCATTTTGACGGGCAGCCTTCTGCCCGATCATGGA
AACATTGAATGGCAGCCAAACATTCGGGTCGGCTTTCTTGAACAGCATGCCAAGCTGACGGAAGGCACAACCATTCTTCA
GTACATGGAGAAAGCGTACGGCCGGCTGTTTGAAATCGAAAAGGAAATGAATGGGCTTGCCGAAAAAATGGCCGATGCCG
GAGACAACCTTGAAGCCGTCCTGAAAAGATACGGAGAGCTTCAGGCTGAGCTGGAAGCTTCAGGATTTTACCAAATCGGA
ACGAAAATTGAGGATGCCGCACAAGGCCTCGGCTTGGCGGAAATCGGGCTTGACCAGGATGTCACGGCTTTAAGCGGCGG
GCAGCGTACAAAGCTGCTGCTTGCCAAACTGCTGCTTGAAGAGCCTGATGTACTGCTGTTGGATGAGCCGACCAACTATT
TGGATGCCGCTCACATTGAGTGGCTGACTGGCTACTTGAAAAACTATGAGCACGCATTTCTTGTCATCTCTCATGACGAA
CGCTTCTTAAATGAAATTACGACGGTTACATTCCATCTGGAGCATCATGTGATCAAACGTTATTCCGGCAACTATCAATA
TTTCCTGAAGGAGTATGCGCAAATCAGGGCACAGGCTGAAGCCGCATATGCAAAACAGAACAGGGAAATCAAAAAGTTAG
AGGCGTTTATCGACCGGAACAGAGTCCGAAAGGCGAAACAGGCCAAAAGCAGGGAGAAAGCATTACGCAAAATCAAGCGA
ATCGAAAAACCGACAGATTCTTATGTCCCAAGCTTTGCATTTAAAACGGGGCGAAACCCGGCGATGACTGTACTCAAAAC
GGAAAATCTTGAGGCCGGCTACACAGTTCCATTATTTAAGCCTCTTTCCCTGACCGTAAGACGGGGCGATAAAATCGCGA
TTATTGGAGAAAACGGCGCCGGAAAATCGACGCTTATCAAAACGCTGCTCGGCGACCTCAAGCCTCTGAGCGGCATCGTC
ACAGCAGGACAGCATTTACAGGCGGCCTATTTCAGGCAGGAAAGCCCAGCTTCTCATGATACACCGCTTGAAAAATTGCG
GGCGTTCTATCCTGATCTACCGGAAAAAGACATCAGGCAGACGCTCGCGGTATCCGGCTTGACGCCAAAGCATATCAGCC
AGCCCCTTTTTACGCTCAGCGGCGGTGAACAGGCAAAGGTCCGGCTGGCGGAGCTGATGCTTTCAAACAGCAACCTGCTT
GTTCTTGATGAACCGACAAACCATCTTGACGCATCGGCAAAGCATGCGTTAAAGCAAGCGCTCTGCGACTATAAGGGAAC
GATTTTGCTCGTATCCCATGAACCGGCTTTTTATGAAGACTGGGTGACTCATATCTGGCAGATTGAAGCATGGCGCCGTT
AA

Upstream 100 bases:

>100_bases
ACAGTTTGATACGATTTGACATCCTTTCTTGCTGTATTTTAAATATGTAGCGGGTAAGGTGTAGTTTGCCTTACCCGTTT
TTTTGCCGGACAGGATAGCG

Downstream 100 bases:

>100_bases
GAGTAAAAGCCGGCCTTTCCAAGGGCCGGCTTTTTTTATTTGGACAATACAAGCTCACGAATGGCGTGGGCAACGCCGTT
TTCATTATTCGTACGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MLHAVLFRWLVFSKISLKERIIMSIVHVTNLTHIYGDRMIFQDAGFRLLKGEHAGLVGANGAGKSTLLRILTGSLLPDHG
NIEWQPNIRVGFLEQHAKLTEGTTILQYMEKAYGRLFEIEKEMNGLAEKMADAGDNLEAVLKRYGELQAELEASGFYQIG
TKIEDAAQGLGLAEIGLDQDVTALSGGQRTKLLLAKLLLEEPDVLLLDEPTNYLDAAHIEWLTGYLKNYEHAFLVISHDE
RFLNEITTVTFHLEHHVIKRYSGNYQYFLKEYAQIRAQAEAAYAKQNREIKKLEAFIDRNRVRKAKQAKSREKALRKIKR
IEKPTDSYVPSFAFKTGRNPAMTVLKTENLEAGYTVPLFKPLSLTVRRGDKIAIIGENGAGKSTLIKTLLGDLKPLSGIV
TAGQHLQAAYFRQESPASHDTPLEKLRAFYPDLPEKDIRQTLAVSGLTPKHISQPLFTLSGGEQAKVRLAELMLSNSNLL
VLDEPTNHLDASAKHALKQALCDYKGTILLVSHEPAFYEDWVTHIWQIEAWRR

Sequences:

>Translated_533_residues
MLHAVLFRWLVFSKISLKERIIMSIVHVTNLTHIYGDRMIFQDAGFRLLKGEHAGLVGANGAGKSTLLRILTGSLLPDHG
NIEWQPNIRVGFLEQHAKLTEGTTILQYMEKAYGRLFEIEKEMNGLAEKMADAGDNLEAVLKRYGELQAELEASGFYQIG
TKIEDAAQGLGLAEIGLDQDVTALSGGQRTKLLLAKLLLEEPDVLLLDEPTNYLDAAHIEWLTGYLKNYEHAFLVISHDE
RFLNEITTVTFHLEHHVIKRYSGNYQYFLKEYAQIRAQAEAAYAKQNREIKKLEAFIDRNRVRKAKQAKSREKALRKIKR
IEKPTDSYVPSFAFKTGRNPAMTVLKTENLEAGYTVPLFKPLSLTVRRGDKIAIIGENGAGKSTLIKTLLGDLKPLSGIV
TAGQHLQAAYFRQESPASHDTPLEKLRAFYPDLPEKDIRQTLAVSGLTPKHISQPLFTLSGGEQAKVRLAELMLSNSNLL
VLDEPTNHLDASAKHALKQALCDYKGTILLVSHEPAFYEDWVTHIWQIEAWRR
>Mature_533_residues
MLHAVLFRWLVFSKISLKERIIMSIVHVTNLTHIYGDRMIFQDAGFRLLKGEHAGLVGANGAGKSTLLRILTGSLLPDHG
NIEWQPNIRVGFLEQHAKLTEGTTILQYMEKAYGRLFEIEKEMNGLAEKMADAGDNLEAVLKRYGELQAELEASGFYQIG
TKIEDAAQGLGLAEIGLDQDVTALSGGQRTKLLLAKLLLEEPDVLLLDEPTNYLDAAHIEWLTGYLKNYEHAFLVISHDE
RFLNEITTVTFHLEHHVIKRYSGNYQYFLKEYAQIRAQAEAAYAKQNREIKKLEAFIDRNRVRKAKQAKSREKALRKIKR
IEKPTDSYVPSFAFKTGRNPAMTVLKTENLEAGYTVPLFKPLSLTVRRGDKIAIIGENGAGKSTLIKTLLGDLKPLSGIV
TAGQHLQAAYFRQESPASHDTPLEKLRAFYPDLPEKDIRQTLAVSGLTPKHISQPLFTLSGGEQAKVRLAELMLSNSNLL
VLDEPTNHLDASAKHALKQALCDYKGTILLVSHEPAFYEDWVTHIWQIEAWRR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=519, Percent_Identity=33.140655105973, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI10947137, Length=517, Percent_Identity=30.174081237911, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=30.174081237911, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI10947135, Length=514, Percent_Identity=31.1284046692607, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI69354671, Length=514, Percent_Identity=31.1284046692607, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI157502203, Length=172, Percent_Identity=30.8139534883721, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI157502201, Length=172, Percent_Identity=30.8139534883721, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI27262624, Length=177, Percent_Identity=29.9435028248588, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI27262626, Length=177, Percent_Identity=29.9435028248588, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1787041, Length=515, Percent_Identity=32.8155339805825, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1789751, Length=485, Percent_Identity=32.7835051546392, Blast_Score=250, Evalue=2e-67,
Organism=Escherichia coli, GI1787182, Length=527, Percent_Identity=31.4990512333966, Blast_Score=229, Evalue=5e-61,
Organism=Escherichia coli, GI2367384, Length=499, Percent_Identity=29.6593186372746, Blast_Score=227, Evalue=2e-60,
Organism=Escherichia coli, GI1788506, Length=505, Percent_Identity=23.3663366336634, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1787547, Length=186, Percent_Identity=30.1075268817204, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786803, Length=229, Percent_Identity=27.5109170305677, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI48994997, Length=228, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1788165, Length=160, Percent_Identity=33.125, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788897, Length=207, Percent_Identity=29.4685990338164, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787758, Length=168, Percent_Identity=29.7619047619048, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788002, Length=177, Percent_Identity=32.2033898305085, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789586, Length=244, Percent_Identity=27.0491803278689, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082064, Length=172, Percent_Identity=31.9767441860465, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787029, Length=196, Percent_Identity=28.0612244897959, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=520, Percent_Identity=29.2307692307692, Blast_Score=215, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI17555318, Length=517, Percent_Identity=28.8201160541586, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=31.3840155945419, Blast_Score=201, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17567243, Length=179, Percent_Identity=27.9329608938547, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=200, Percent_Identity=27, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=525, Percent_Identity=31.6190476190476, Blast_Score=232, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=28.0961182994455, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=30.0771208226221, Blast_Score=140, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6324314, Length=398, Percent_Identity=27.3869346733668, Blast_Score=134, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=402, Percent_Identity=27.6119402985075, Blast_Score=129, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24642252, Length=522, Percent_Identity=31.6091954022989, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI18859989, Length=522, Percent_Identity=31.6091954022989, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24666836, Length=516, Percent_Identity=31.9767441860465, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24641342, Length=529, Percent_Identity=32.5141776937618, Blast_Score=226, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60018; Mature: 60018

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHAVLFRWLVFSKISLKERIIMSIVHVTNLTHIYGDRMIFQDAGFRLLKGEHAGLVGAN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCEEECC
GAGKSTLLRILTGSLLPDHGNIEWQPNIRVGFLEQHAKLTEGTTILQYMEKAYGRLFEIE
CCCHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KEMNGLAEKMADAGDNLEAVLKRYGELQAELEASGFYQIGTKIEDAAQGLGLAEIGLDQD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHCCCCCC
VTALSGGQRTKLLLAKLLLEEPDVLLLDEPTNYLDAAHIEWLTGYLKNYEHAFLVISHDE
CHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCH
RFLNEITTVTFHLEHHVIKRYSGNYQYFLKEYAQIRAQAEAAYAKQNREIKKLEAFIDRN
HHHHHHHHEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RVRKAKQAKSREKALRKIKRIEKPTDSYVPSFAFKTGRNPAMTVLKTENLEAGYTVPLFK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCEECCCC
PLSLTVRRGDKIAIIGENGAGKSTLIKTLLGDLKPLSGIVTAGQHLQAAYFRQESPASHD
CCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCC
TPLEKLRAFYPDLPEKDIRQTLAVSGLTPKHISQPLFTLSGGEQAKVRLAELMLSNSNLL
CHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEE
VLDEPTNHLDASAKHALKQALCDYKGTILLVSHEPAFYEDWVTHIWQIEAWRR
EEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHAVLFRWLVFSKISLKERIIMSIVHVTNLTHIYGDRMIFQDAGFRLLKGEHAGLVGAN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEECCCCCCEEECC
GAGKSTLLRILTGSLLPDHGNIEWQPNIRVGFLEQHAKLTEGTTILQYMEKAYGRLFEIE
CCCHHHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KEMNGLAEKMADAGDNLEAVLKRYGELQAELEASGFYQIGTKIEDAAQGLGLAEIGLDQD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHCCCCCC
VTALSGGQRTKLLLAKLLLEEPDVLLLDEPTNYLDAAHIEWLTGYLKNYEHAFLVISHDE
CHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCH
RFLNEITTVTFHLEHHVIKRYSGNYQYFLKEYAQIRAQAEAAYAKQNREIKKLEAFIDRN
HHHHHHHHEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RVRKAKQAKSREKALRKIKRIEKPTDSYVPSFAFKTGRNPAMTVLKTENLEAGYTVPLFK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCEECCCC
PLSLTVRRGDKIAIIGENGAGKSTLIKTLLGDLKPLSGIVTAGQHLQAAYFRQESPASHD
CCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCC
TPLEKLRAFYPDLPEKDIRQTLAVSGLTPKHISQPLFTLSGGEQAKVRLAELMLSNSNLL
CHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEE
VLDEPTNHLDASAKHALKQALCDYKGTILLVSHEPAFYEDWVTHIWQIEAWRR
EEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]