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The map label for this gene is ywdK [H]

Identifier: 52787685

GI number: 52787685

Start: 3831600

End: 3831977

Strand: Reverse

Name: ywdK [H]

Synonym: BLi04008

Alternate gene names: 52787685

Gene position: 3831977-3831600 (Counterclockwise)

Preceding gene: 52787686

Following gene: 52787684

Centisome position: 90.75

GC content: 49.21

Gene sequence:

>378_bases
TTGATCGTGAAATTATTTTTGATTTTAGGTGCTGTCAATGCTATGCTTGCGGTTGCTTTAGGAGCGTTCGGAGCCCATGG
TCTTGAAGGGAAAATTCCCGAGAAATATTTGCAAATCTGGCAGACCGGCGTCCAGTATCATATGTATCATGCGCTCGGTT
TAATTGCCGTCGCGCTCATCGCGTCAAAACTGGCAGGTGCGGGAAGCGTTTCTGCGGCAGGGTGGCTGATGTTTGCCGGA
ATCGTTTTATTTTCTGGAAGTTTATATGTCCTCAGCCTTACGCAAATCAGCGTCCTCGGTGCGATTACTCCGCTGGGCGG
CGTGGCGTTTATTGCCGCATGGATCATGGTCGTTGTCTCAGCGGTCAAATATTTGTAG

Upstream 100 bases:

>100_bases
CAGCTTAGGAAAAAGAAATATGACAATATCGTGTCATGAGATTTGCATAAGTTGAAATTCATGACATGTACGCTATGATG
ATAAAGGAAAGGCGGGCGAT

Downstream 100 bases:

>100_bases
TTTTACTAAAAAAGCCAATCTCTGAAAAGGATTGGCTTTTTTTATTTTAACAGGGGCTGATTCATGGTAATTTAATGTTA
TGAACAGGGCGAAAGACCCG

Product: YwdK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MIVKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALIASKLAGAGSVSAAGWLMFAG
IVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVSAVKYL

Sequences:

>Translated_125_residues
MIVKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALIASKLAGAGSVSAAGWLMFAG
IVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVSAVKYL
>Mature_125_residues
MIVKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALIASKLAGAGSVSAAGWLMFAG
IVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVSAVKYL

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=123, Percent_Identity=34.9593495934959, Blast_Score=72, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193203406, Length=116, Percent_Identity=35.3448275862069, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 12976; Mature: 12976

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKLAGAGSVSAAGWLMFAGIVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVS
HHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AVKYL
HHHCC
>Mature Secondary Structure
MIVKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKLAGAGSVSAAGWLMFAGIVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVS
HHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AVKYL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]