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The map label for this gene is ywjF [H]

Identifier: 52787647

GI number: 52787647

Start: 3794613

End: 3796727

Strand: Reverse

Name: ywjF [H]

Synonym: BLi03969

Alternate gene names: 52787647

Gene position: 3796727-3794613 (Counterclockwise)

Preceding gene: 52787649

Following gene: 52787646

Centisome position: 89.91

GC content: 49.17

Gene sequence:

>2115_bases
ATGAATGTCTTGCTGTCGTTGAATTTCATTGCGTTTTTAGGTGTAACCGTTTACGCCGTTTATCTGTTCGTCTATTTGAT
CAGAACGAGAATCAGTTACATCAGGCTCGGACAAAAAGAGGATTTTGATAAGCGGACGAAGGAGCGCCTTCAAAAGATAT
GGGAGAACGTGTTCGGCCAAAAGAAACTGCTTAAAGATAAAAAAAGCGGCATCATCCATGTCATGTTTTTTTACGGCTTT
ATTCTCGTTCAGTTCGGAGCGATCGATTTTATTTTGAAAGGGCTCGTTCCTGATCAAGGCATTCCGCTTGGCGGCGTCTA
CCCGGCGTTTACGTTTTTTCAGGAAATCGTCACACTGATGATTTTAATTGCGGTAGTCTGGGCTTTTCACAGGCGGTATA
TAGAAAAACTCGTCAGGCTGAAGCGCAATTTTAAGTCGGGGATCGTGCTCATGCTGATCGGCGGCTTGATGTTTACCGTT
TTACTCGGAAACGGTATGAACATGATCTGGCATGAACATTCATTATCATGGCACGAACCGATGGCATCAGGCATCGCTTT
TGCCTTCGGCTTTATGGGGGAAACCGCTTCAGCGGCAGTGTTCTACGCGGCGTGGTGGGCGCACCTTCTCATCCTGCTGA
CATTTTTAGTCTATGTACCGCAGTCAAAGCACGCCCACTTAATTGCCGGACCGGCAAACGTATTTTTCAGCCGGCTGACA
AACCCGGGAAAGCTTCAAAAAATCGATTTTGAAGATGAAACAAAAGAAACGTTCGGCGTCGGACGGATCGAGGAATTCAG
GCAGTCCCAGCTGATCGACCTTTACGCATGCGTGGAATGCGGGCGCTGTACCAATATGTGCCCGGCTACAGGAACAGGCA
AGATGCTTTCGCCGATGGATCTGATTTTGCGGCTCAGAGACCATTTGACAGAAAAGGGAGCAGCAGTGACATCGAGAACG
CCTTGGGTACCCGCACCGCTCTTTCAGCATACGAAAGGCAACCAGCTGGCCATGGCGGCAGGGGGAGAAGGGTCAAGGGA
AGCGGCTGCTTCAGAACTTTACAACCCGAGCTTAATCGGCGACATCATCACAGAAGAAGAAATTTGGGCCTGCACAACAT
GCCGGAATTGTGAAGATCAGTGCCCGGTCATGAATGAGCACGTCGATAAGATCATCGATCTCCGCCGCTATCTCGTGCTC
ACAGAAGGAAAAATGGATGCAGATGCCCAACGCGCCATGACGAGCATTGAAAGGCAGGGGAACCCTTGGGGATTAAACCG
AAAAGAACGTGAAAACTGGCGTGATATAAGAGACGATGTTGAGGTGCCGACAGTAAAAGAAATGAAGAAAAAAGGCGAGT
CCTTTGAATACCTGTTTTGGGTCGGGTCGATGGGATCGTATGACCGGAGAAGCCAGAAGATCGCCATGGCTTTCGCTCGC
CTCCTCAATCAAGCCGGGGTCACGTTCGCGATATTAGGCAATAAAGAAAAAAATTCAGGCGATACGCCGAGACGGCTTGG
CAACGAGTTTTTATTCCAGGAGCTAGCTGCAAAAAACATTGAGGAATTTGAAAAAAATGATGTTCAAAAAATTGTAACTA
TCGACCCGCATGCATACAATATTTTCAAAAATGAATATCCTGATTTTGGTCTGAAAGCGGAAGTTTATCATCATACAGAA
ATTCTTGCTGCCCTCATTGAAGAAGGAAAGCTGAAACCTGAGTTTCCGGTTCACGAAACCGTCACCTTTCATGATTCATG
CTATTTGGGCCGCTACAACGAGGTTTACGATCCGCCGCGCGCTATTCTCCGCTCCATTCCGGGCATCCGTTTAGCGGAAA
TGGAGCGCAGCCGTGAAAACGGAATGTGCTGCGGAGCGGGGGGCGGCCTCATGTGGATGGAGGAAGAGGCGGGCGCGAGG
ATCAACGTTGCCAGAACGGAGCAGGCGCTCAGCACATCACCTTCTGTCATCAGCTCGGGCTGTCCTTACTGTTTGACGAT
GCTCGGCGACGGAACAAAAGCCAAGGAATTGGAGGATCAGGTCGGCACGTATGATGTAGCGGAGCTGCTTGAACGCGCCG
TATTCGGGTCAGAGCAAAAAGAACATGCCTCATAG

Upstream 100 bases:

>100_bases
TGCATTTATGAAAATATATTGACTGAACACTCATTCATTATTTAAGATAAAGGTAGTTCAAGGGGATTTAAGGTTGGGGA
AATGAAAGGGGGAGCAGCTG

Downstream 100 bases:

>100_bases
ACGGATTTCAGGTTTTAAATAAAGAAGGTGTGAGCCGGATCTCCGCCTTCTTTTATCTTCGGTATGTACAAATCATGATA
AGGGGAGAGGATGTCAGGTG

Product: YwjF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MNVLLSLNFIAFLGVTVYAVYLFVYLIRTRISYIRLGQKEDFDKRTKERLQKIWENVFGQKKLLKDKKSGIIHVMFFYGF
ILVQFGAIDFILKGLVPDQGIPLGGVYPAFTFFQEIVTLMILIAVVWAFHRRYIEKLVRLKRNFKSGIVLMLIGGLMFTV
LLGNGMNMIWHEHSLSWHEPMASGIAFAFGFMGETASAAVFYAAWWAHLLILLTFLVYVPQSKHAHLIAGPANVFFSRLT
NPGKLQKIDFEDETKETFGVGRIEEFRQSQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKGAAVTSRT
PWVPAPLFQHTKGNQLAMAAGGEGSREAAASELYNPSLIGDIITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVL
TEGKMDADAQRAMTSIERQGNPWGLNRKERENWRDIRDDVEVPTVKEMKKKGESFEYLFWVGSMGSYDRRSQKIAMAFAR
LLNQAGVTFAILGNKEKNSGDTPRRLGNEFLFQELAAKNIEEFEKNDVQKIVTIDPHAYNIFKNEYPDFGLKAEVYHHTE
ILAALIEEGKLKPEFPVHETVTFHDSCYLGRYNEVYDPPRAILRSIPGIRLAEMERSRENGMCCGAGGGLMWMEEEAGAR
INVARTEQALSTSPSVISSGCPYCLTMLGDGTKAKELEDQVGTYDVAELLERAVFGSEQKEHAS

Sequences:

>Translated_704_residues
MNVLLSLNFIAFLGVTVYAVYLFVYLIRTRISYIRLGQKEDFDKRTKERLQKIWENVFGQKKLLKDKKSGIIHVMFFYGF
ILVQFGAIDFILKGLVPDQGIPLGGVYPAFTFFQEIVTLMILIAVVWAFHRRYIEKLVRLKRNFKSGIVLMLIGGLMFTV
LLGNGMNMIWHEHSLSWHEPMASGIAFAFGFMGETASAAVFYAAWWAHLLILLTFLVYVPQSKHAHLIAGPANVFFSRLT
NPGKLQKIDFEDETKETFGVGRIEEFRQSQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKGAAVTSRT
PWVPAPLFQHTKGNQLAMAAGGEGSREAAASELYNPSLIGDIITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVL
TEGKMDADAQRAMTSIERQGNPWGLNRKERENWRDIRDDVEVPTVKEMKKKGESFEYLFWVGSMGSYDRRSQKIAMAFAR
LLNQAGVTFAILGNKEKNSGDTPRRLGNEFLFQELAAKNIEEFEKNDVQKIVTIDPHAYNIFKNEYPDFGLKAEVYHHTE
ILAALIEEGKLKPEFPVHETVTFHDSCYLGRYNEVYDPPRAILRSIPGIRLAEMERSRENGMCCGAGGGLMWMEEEAGAR
INVARTEQALSTSPSVISSGCPYCLTMLGDGTKAKELEDQVGTYDVAELLERAVFGSEQKEHAS
>Mature_704_residues
MNVLLSLNFIAFLGVTVYAVYLFVYLIRTRISYIRLGQKEDFDKRTKERLQKIWENVFGQKKLLKDKKSGIIHVMFFYGF
ILVQFGAIDFILKGLVPDQGIPLGGVYPAFTFFQEIVTLMILIAVVWAFHRRYIEKLVRLKRNFKSGIVLMLIGGLMFTV
LLGNGMNMIWHEHSLSWHEPMASGIAFAFGFMGETASAAVFYAAWWAHLLILLTFLVYVPQSKHAHLIAGPANVFFSRLT
NPGKLQKIDFEDETKETFGVGRIEEFRQSQLIDLYACVECGRCTNMCPATGTGKMLSPMDLILRLRDHLTEKGAAVTSRT
PWVPAPLFQHTKGNQLAMAAGGEGSREAAASELYNPSLIGDIITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVL
TEGKMDADAQRAMTSIERQGNPWGLNRKERENWRDIRDDVEVPTVKEMKKKGESFEYLFWVGSMGSYDRRSQKIAMAFAR
LLNQAGVTFAILGNKEKNSGDTPRRLGNEFLFQELAAKNIEEFEKNDVQKIVTIDPHAYNIFKNEYPDFGLKAEVYHHTE
ILAALIEEGKLKPEFPVHETVTFHDSCYLGRYNEVYDPPRAILRSIPGIRLAEMERSRENGMCCGAGGGLMWMEEEAGAR
INVARTEQALSTSPSVISSGCPYCLTMLGDGTKAKELEDQVGTYDVAELLERAVFGSEQKEHAS

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 79622; Mature: 79622

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLLSLNFIAFLGVTVYAVYLFVYLIRTRISYIRLGQKEDFDKRTKERLQKIWENVFGQ
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCH
KKLLKDKKSGIIHVMFFYGFILVQFGAIDFILKGLVPDQGIPLGGVYPAFTFFQEIVTLM
HHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ILIAVVWAFHRRYIEKLVRLKRNFKSGIVLMLIGGLMFTVLLGNGMNMIWHEHSLSWHEP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
MASGIAFAFGFMGETASAAVFYAAWWAHLLILLTFLVYVPQSKHAHLIAGPANVFFSRLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCC
NPGKLQKIDFEDETKETFGVGRIEEFRQSQLIDLYACVECGRCTNMCPATGTGKMLSPMD
CCCCEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LILRLRDHLTEKGAAVTSRTPWVPAPLFQHTKGNQLAMAAGGEGSREAAASELYNPSLIG
HHHHHHHHHHHCCCEECCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCHHHH
DIITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVLTEGKMDADAQRAMTSIERQG
HHHCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCC
NPWGLNRKERENWRDIRDDVEVPTVKEMKKKGESFEYLFWVGSMGSYDRRSQKIAMAFAR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
LLNQAGVTFAILGNKEKNSGDTPRRLGNEFLFQELAAKNIEEFEKNDVQKIVTIDPHAYN
HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
IFKNEYPDFGLKAEVYHHTEILAALIEEGKLKPEFPVHETVTFHDSCYLGRYNEVYDPPR
HHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCCCCCHH
AILRSIPGIRLAEMERSRENGMCCGAGGGLMWMEEEAGARINVARTEQALSTSPSVISSG
HHHHHCCCCCHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEEHHHHHHHCCCCHHHHCC
CPYCLTMLGDGTKAKELEDQVGTYDVAELLERAVFGSEQKEHAS
CCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MNVLLSLNFIAFLGVTVYAVYLFVYLIRTRISYIRLGQKEDFDKRTKERLQKIWENVFGQ
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCH
KKLLKDKKSGIIHVMFFYGFILVQFGAIDFILKGLVPDQGIPLGGVYPAFTFFQEIVTLM
HHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ILIAVVWAFHRRYIEKLVRLKRNFKSGIVLMLIGGLMFTVLLGNGMNMIWHEHSLSWHEP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH
MASGIAFAFGFMGETASAAVFYAAWWAHLLILLTFLVYVPQSKHAHLIAGPANVFFSRLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCC
NPGKLQKIDFEDETKETFGVGRIEEFRQSQLIDLYACVECGRCTNMCPATGTGKMLSPMD
CCCCEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LILRLRDHLTEKGAAVTSRTPWVPAPLFQHTKGNQLAMAAGGEGSREAAASELYNPSLIG
HHHHHHHHHHHCCCEECCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCHHHH
DIITEEEIWACTTCRNCEDQCPVMNEHVDKIIDLRRYLVLTEGKMDADAQRAMTSIERQG
HHHCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCC
NPWGLNRKERENWRDIRDDVEVPTVKEMKKKGESFEYLFWVGSMGSYDRRSQKIAMAFAR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
LLNQAGVTFAILGNKEKNSGDTPRRLGNEFLFQELAAKNIEEFEKNDVQKIVTIDPHAYN
HHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
IFKNEYPDFGLKAEVYHHTEILAALIEEGKLKPEFPVHETVTFHDSCYLGRYNEVYDPPR
HHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCCCCCHH
AILRSIPGIRLAEMERSRENGMCCGAGGGLMWMEEEAGARINVARTEQALSTSPSVISSG
HHHHHCCCCCHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEEHHHHHHHCCCCHHHHCC
CPYCLTMLGDGTKAKELEDQVGTYDVAELLERAVFGSEQKEHAS
CCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]