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The map label for this gene is rsoA [H]

Identifier: 52787264

GI number: 52787264

Start: 3419433

End: 3419624

Strand: Reverse

Name: rsoA [H]

Synonym: BLi03576

Alternate gene names: 52787264

Gene position: 3419624-3419433 (Counterclockwise)

Preceding gene: 52787265

Following gene: 52787263

Centisome position: 80.98

GC content: 39.06

Gene sequence:

>192_bases
GTGAGTCTGCACGATGAAAAAGAGATTGAGAAATTGCTGGAAAATTTCACACCGATGATCAAAAGCAAATTAGAGAGGGA
GGATCTTGAACAGGAGCTGAAGATGAAGATTTGCGAAAAAGCGGAGATGCTTTTATGTCAAGAAGTGCCTGGTTTTTGGG
AGTTTATAACAGAATTGCTGAAAGTCCTTTAA

Upstream 100 bases:

>100_bases
TCTTTGGGAGAATCAAGGCAAAATATTTCAAAAATTCATAAAAGGGCACTCGAAAAGATAAGAGAGCTGCTGAATTCTAA
AGCAGAGGGGAATGATAACA

Downstream 100 bases:

>100_bases
TCTGAGCTGTTTTGCTTGCGTAAAGCCGCCGGAAGTGTTAAAATTTCTAACATTTGATTAATGGAATGTTCAAGCTGCTT
CATTGAAATCATGGTGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSLHDEKEIEKLLENFTPMIKSKLEREDLEQELKMKICEKAEMLLCQEVPGFWEFITELLKVL

Sequences:

>Translated_63_residues
MSLHDEKEIEKLLENFTPMIKSKLEREDLEQELKMKICEKAEMLLCQEVPGFWEFITELLKVL
>Mature_62_residues
SLHDEKEIEKLLENFTPMIKSKLEREDLEQELKMKICEKAEMLLCQEVPGFWEFITELLKVL

Specific function: Together with RNA polymerase sigma factor sigO, positively regulates the expression of at least three operons, including oxdC-yvrL, sigO-rsoA and yvrJ. Required for the acid stress-dependent induction of the oxalate decarboxylase oxdC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7569; Mature: 7438

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHDEKEIEKLLENFTPMIKSKLEREDLEQELKMKICEKAEMLLCQEVPGFWEFITELL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KVL
HHC
>Mature Secondary Structure 
SLHDEKEIEKLLENFTPMIKSKLEREDLEQELKMKICEKAEMLLCQEVPGFWEFITELL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KVL
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]