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The map label for this gene is yurV [H]

Identifier: 52787140

GI number: 52787140

Start: 3294030

End: 3294476

Strand: Reverse

Name: yurV [H]

Synonym: BLi03448

Alternate gene names: 52787140

Gene position: 3294476-3294030 (Counterclockwise)

Preceding gene: 52787141

Following gene: 52787139

Centisome position: 78.02

GC content: 43.85

Gene sequence:

>447_bases
ATGTCTTTTAATGTGAACTTGGATACACTGTATCGCCAGGTGATTATGGATCACTATAAAAACCCGAGAAATAAAGGGGT
TTTGAATGACAGCATCGTCGTTGACATGAACAACCCGACATGCGGTGACCGGATCAGGCTGACGATGAAGATAACGGACG
GTAAAGTAGAAGATGCAAAATTTGAAGGCGAAGGATGCTCAATCTCAATGGCTTCTGCGTCTATGATGACACAGGCGATC
AAAGGGAAAGACGTGGAGACCGCCCTTCAAATGTCACGGATCTTTTCAGATATGATGCAGGGCAAAGACTACGACGATTC
GATTGATTTAGGAGATATTGAAGCTCTGCAAGGCGTTTCAAAATTTCCGGCCCGAATTAAATGCGCAACATTGTCATGGA
AAGCCCTCGAAAAAGGCGTTTCCAAAGAAAACAGCGATAACGAATAA

Upstream 100 bases:

>100_bases
GTCTCCGCCACTGCAAGAGCGAGCTTTTATCTGTATAATACGGAAGAAGACATCGACAAACTGATTGAAGCTCTTCAGAA
GACAAAGGAGTATTTCACAA

Downstream 100 bases:

>100_bases
AGATTGGAGTGAAAATGGATGGCTAAGAAAATGCCGGATATCGGCGAATATAAATACGGTTTTGCCGACAAAGACGTTTC
CATTTTCCGTTCAGAGCGGG

Product: YurV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSFNVNLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKITDGKVEDAKFEGEGCSISMASASMMTQAI
KGKDVETALQMSRIFSDMMQGKDYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVSKENSDNE

Sequences:

>Translated_148_residues
MSFNVNLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKITDGKVEDAKFEGEGCSISMASASMMTQAI
KGKDVETALQMSRIFSDMMQGKDYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVSKENSDNE
>Mature_147_residues
SFNVNLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKITDGKVEDAKFEGEGCSISMASASMMTQAIK
GKDVETALQMSRIFSDMMQGKDYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVSKENSDNE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=87, Percent_Identity=39.0804597701149, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788878, Length=143, Percent_Identity=30.0699300699301, Blast_Score=69, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17543474, Length=83, Percent_Identity=40.9638554216867, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325122, Length=148, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6324800, Length=137, Percent_Identity=27.007299270073, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355597, Length=85, Percent_Identity=38.8235294117647, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16455; Mature: 16324

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNVNLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKITDGKVEDAK
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCE
FEGEGCSISMASASMMTQAIKGKDVETALQMSRIFSDMMQGKDYDDSIDLGDIEALQGVS
ECCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
KFPARIKCATLSWKALEKGVSKENSDNE
HCCCEEEEEECCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SFNVNLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKITDGKVEDAK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCE
FEGEGCSISMASASMMTQAIKGKDVETALQMSRIFSDMMQGKDYDDSIDLGDIEALQGVS
ECCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
KFPARIKCATLSWKALEKGVSKENSDNE
HCCCEEEEEECCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]