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The map label for this gene is yurU [H]

Identifier: 52787139

GI number: 52787139

Start: 3292614

End: 3294011

Strand: Reverse

Name: yurU [H]

Synonym: BLi03447

Alternate gene names: 52787139

Gene position: 3294011-3292614 (Counterclockwise)

Preceding gene: 52787140

Following gene: 52787138

Centisome position: 78.01

GC content: 46.42

Gene sequence:

>1398_bases
ATGGCTAAGAAAATGCCGGATATCGGCGAATATAAATACGGTTTTGCCGACAAAGACGTTTCCATTTTCCGTTCAGAGCG
GGGATTGACAAAAGAAATCGTTGAAGAAATTTCACGCATGAAAGAAGAGCCACAGTGGATGCTCGACTTTCGCTTGAAAT
CTCTTGAACACTTCTACAATATGCCAATGCCGCAATGGGGCGGAGATTTAAACTCATTAAACTTTGATGAAATCACATAC
TATGTAAAGCCTTCTGAGCGTTCAGAAAGATCATGGGACGAAGTGCCTGAGGAAATCAAACAGACATTTGACAAGCTCGG
AATCCCAGAAGCTGAGCAAAAATATTTGGCCGGTGTATCCGCGCAATATGAGTCAGAAGTCGTTTACCATAACATGAAAG
AAGACCTTGAGTCTCAAGGGATCGTCTTCAAAGACACAGACAGCGCCCTCAAAGAAAATGAAGACATTTTCCGCGAGCAT
TGGGCAAAAGTCATCCCGCCGACTGACAACAAGTTTGCGGCCTTGAACTCAGCGGTATGGTCAGGCGGATCATTCATCTA
CGTGCCAAAAGGCGTAAAAGTGGATACTCCGCTGCAAGCATACTTCCGCATCAACTCAGAAAACATGGGACAGTTCGAAC
GGACGCTGATCATCGTAGACGAAGGCGCTCACGTCCACTATGTAGAGGGATGTACAGCACCTGTTTATACGACGAACTCC
CTTCACAGCGCGGTTGTTGAGATCATCGTTAAAAAAGGCGGCTACTGCCGTTATACAACGATTCAAAACTGGGCGAACAA
CGTCTTCAACCTTGTGACAAAGCGTGCGGTTTGTGAAGAAAACGCGACGATGGAATGGATCGACGGAAACATCGGCTCCA
AGCTGACAATGAAATATCCTGCCGTTATCCTGAAAGGCGAAGGCGCGCGCGGCATGACGCTTTCTATCGCCCTGGCAGGA
AAAGGACAGCATCAGGATGCCGGTGCGAAAATGATTCACCTTGCACCGAATACGTCATCCACAATCGTTTCAAAATCAAT
CTCAAAACAAGGCGGAAAAGTCACATACCGCGGAATCGTACACTTCGGACGCAAAGCCGAAGGCGCCCGCTCAAACATCG
AGTGCGACACGCTTATCATGGACAACAAATCAACTTCTGATACAATCCCATACAATGAAATTTTGAACGACAACATTTCA
TTGGAGCACGAAGCGAAAGTATCAAAAGTATCTGAAGAGCAGCTCTTCTACTTGATGAGCCGCGGTATTTCTGAAGAAGA
AGCAACAGAAATGATCGTCATGGGCTTCATCGAGCCGTTCACGAAAGAACTGCCGATGGAATACGCAGTCGAAATGAACC
GTCTTATCAAGTTCGAGATGGAAGGGTCTATTGGTTAA

Upstream 100 bases:

>100_bases
TCCGGCCCGAATTAAATGCGCAACATTGTCATGGAAAGCCCTCGAAAAAGGCGTTTCCAAAGAAAACAGCGATAACGAAT
AAAGATTGGAGTGAAAATGG

Downstream 100 bases:

>100_bases
CCCTTGATACTAAAGGGGGTGATCAGACTTCGATTTGATTGCACCCGAATAAACTTTATGTTTGTGTACCGCAGATATAA
TCTATTGCCTATCGATTTTC

Product: YurU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKKMPDIGEYKYGFADKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITY
YVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLESQGIVFKDTDSALKENEDIFREH
WAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
LHSAVVEIIVKKGGYCRYTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG
KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKKMPDIGEYKYGFADKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITY
YVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLESQGIVFKDTDSALKENEDIFREH
WAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
LHSAVVEIIVKKGGYCRYTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAG
KGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNIS
LEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKKMPDIGEYKYGFADKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYY
VKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLESQGIVFKDTDSALKENEDIFREHW
AKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSL
HSAVVEIIVKKGGYCRYTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGMTLSIALAGK
GQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIVHFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISL
EHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=477, Percent_Identity=40.6708595387841, Blast_Score=371, Evalue=1e-104,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=26.6233766233766, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52594; Mature: 52463

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKMPDIGEYKYGFADKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYN
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
MPMPQWGGDLNSLNFDEITYYVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLESQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVW
CHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHC
SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECCH
LHSAVVEIIVKKGGYCRYTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
AVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH
HFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AKKMPDIGEYKYGFADKDVSIFRSERGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYN
CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
MPMPQWGGDLNSLNFDEITYYVKPSERSERSWDEVPEEIKQTFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLESQGIVFKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVW
CHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHC
SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECCH
LHSAVVEIIVKKGGYCRYTTIQNWANNVFNLVTKRAVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
AVILKGEGARGMTLSIALAGKGQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHH
HFGRKAEGARSNIECDTLIMDNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMS
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]