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The map label for this gene is rapI [H]

Identifier: 52787138

GI number: 52787138

Start: 3291049

End: 3292170

Strand: Reverse

Name: rapI [H]

Synonym: BLi03446

Alternate gene names: 52787138

Gene position: 3292170-3291049 (Counterclockwise)

Preceding gene: 52787139

Following gene: 52787137

Centisome position: 77.96

GC content: 34.85

Gene sequence:

>1122_bases
GTGAGCGTGATACCATATGATTTGGTTGCGACGAAAATGAATTTTTGGTATACAGCCTTAAAAAACAATTGGACAGGCAA
GGCTGAGGATACTAAGAAAGAAGTTGAACGAGAATTAGAACAAATGGAACAAAATCAGGATGTGATTGTCTATTACAACT
TACTGCTCTTCCGGCATAATCTTCAACTTGATTATATGTATTCTAAACCCGGTGTAAATTTAAATAGTCGTTTTGATGAG
TTCAAAAAGATTCGCGATCAGAATAATCTGGAAGGAATGTTGGATTATTATTATCATTTTTTCGCTGGAATGTATCATTT
CAGACAAAAAGAATTAATCCTTGCGCTGAATTTTTATAGGGATGCCGAGAAAAAACTCGATTCTTTTGATTGTGATGAAC
TGGAAAAGGCTGAATTTTATTTCAAGGCATCTGAAGTGTATTACCATATGAAACAAACCATCTTTTCGATGAATTATGCA
AGTCGTGCGTATAACTTATTCAAAAAGTATGATACTTACGGTGAGCGTCGAGTACAAAGTCAGTTTATTATTGCAGGTAA
CTGGCTAGATCATATGTATCCCGAAAAAGCTCTACATAATTTAAATAAAGAGCTTAAAGAGTCAGAGACACAAGGAATTC
TTCATCTTATGGGTTCATCACATTTAAATATCGGAATATGCTACAATAAATTGGAAGATGTCGATAAAGCAACCTACAAT
TTTCAAAGAGCTCTGAACCTTTATAAAGAGGAGAAGCATAGTTTTTTGCCAAAAACATTATTCAACCTCGCACATGTCAG
GGCAAAGCAAGGGAAGTTGTCAATAACTGATGACCTATACTATGAAGGCAAAGAGTTGGCTGAAAAGAACAAGAATTTAG
ATATGCTTGCAAAGTTTGATTTAATAAAAGGGCTTTATCTTTCATTTGATCTGGATATGGTTCGCGAATCGTTCAAGTTT
TTCGAAAGTAAAGGCAAGTATGCAGACATGGAGGAATACGGTCTTATAGCGGCTGAACTATTAGAGAAAAAAGAAAAAAT
TCGAGATGCAGTGGAATTCTACCGGATAACAGTTAATGCGAGAAGACAAATTCAAAGGAGTGCTTTTCTACATGTAAACT
AA

Upstream 100 bases:

>100_bases
AATTATTACTTTTATGTAAAATGATGACTATGAATAAAAAGGGAATTGCTATTTTGGGTTTTTAGAAAAATTATAATCTT
GCGAGAAAGGAAGAGGATAT

Downstream 100 bases:

>100_bases
ATCGTTCTAGGGGTAGTTAAAGCAGCAGGATTTCTTACTATAAAAAAGAATTTCCCCCAGCATTATTAAAACCTCAAATT
TTGATTACTTGATTATTATT

Product: RapI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSVIPYDLVATKMNFWYTALKNNWTGKAEDTKKEVERELEQMEQNQDVIVYYNLLLFRHNLQLDYMYSKPGVNLNSRFDE
FKKIRDQNNLEGMLDYYYHFFAGMYHFRQKELILALNFYRDAEKKLDSFDCDELEKAEFYFKASEVYYHMKQTIFSMNYA
SRAYNLFKKYDTYGERRVQSQFIIAGNWLDHMYPEKALHNLNKELKESETQGILHLMGSSHLNIGICYNKLEDVDKATYN
FQRALNLYKEEKHSFLPKTLFNLAHVRAKQGKLSITDDLYYEGKELAEKNKNLDMLAKFDLIKGLYLSFDLDMVRESFKF
FESKGKYADMEEYGLIAAELLEKKEKIRDAVEFYRITVNARRQIQRSAFLHVN

Sequences:

>Translated_373_residues
MSVIPYDLVATKMNFWYTALKNNWTGKAEDTKKEVERELEQMEQNQDVIVYYNLLLFRHNLQLDYMYSKPGVNLNSRFDE
FKKIRDQNNLEGMLDYYYHFFAGMYHFRQKELILALNFYRDAEKKLDSFDCDELEKAEFYFKASEVYYHMKQTIFSMNYA
SRAYNLFKKYDTYGERRVQSQFIIAGNWLDHMYPEKALHNLNKELKESETQGILHLMGSSHLNIGICYNKLEDVDKATYN
FQRALNLYKEEKHSFLPKTLFNLAHVRAKQGKLSITDDLYYEGKELAEKNKNLDMLAKFDLIKGLYLSFDLDMVRESFKF
FESKGKYADMEEYGLIAAELLEKKEKIRDAVEFYRITVNARRQIQRSAFLHVN
>Mature_372_residues
SVIPYDLVATKMNFWYTALKNNWTGKAEDTKKEVERELEQMEQNQDVIVYYNLLLFRHNLQLDYMYSKPGVNLNSRFDEF
KKIRDQNNLEGMLDYYYHFFAGMYHFRQKELILALNFYRDAEKKLDSFDCDELEKAEFYFKASEVYYHMKQTIFSMNYAS
RAYNLFKKYDTYGERRVQSQFIIAGNWLDHMYPEKALHNLNKELKESETQGILHLMGSSHLNIGICYNKLEDVDKATYNF
QRALNLYKEEKHSFLPKTLFNLAHVRAKQGKLSITDDLYYEGKELAEKNKNLDMLAKFDLIKGLYLSFDLDMVRESFKFF
ESKGKYADMEEYGLIAAELLEKKEKIRDAVEFYRITVNARRQIQRSAFLHVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 44600; Mature: 44469

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIPYDLVATKMNFWYTALKNNWTGKAEDTKKEVERELEQMEQNQDVIVYYNLLLFRHN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCC
LQLDYMYSKPGVNLNSRFDEFKKIRDQNNLEGMLDYYYHFFAGMYHFRQKELILALNFYR
CCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
DAEKKLDSFDCDELEKAEFYFKASEVYYHMKQTIFSMNYASRAYNLFKKYDTYGERRVQS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QFIIAGNWLDHMYPEKALHNLNKELKESETQGILHLMGSSHLNIGICYNKLEDVDKATYN
EEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
FQRALNLYKEEKHSFLPKTLFNLAHVRAKQGKLSITDDLYYEGKELAEKNKNLDMLAKFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCHHHHHCCCCHHHHHHHH
LIKGLYLSFDLDMVRESFKFFESKGKYADMEEYGLIAAELLEKKEKIRDAVEFYRITVNA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRQIQRSAFLHVN
HHHHHHHHCCCCC
>Mature Secondary Structure 
SVIPYDLVATKMNFWYTALKNNWTGKAEDTKKEVERELEQMEQNQDVIVYYNLLLFRHN
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCC
LQLDYMYSKPGVNLNSRFDEFKKIRDQNNLEGMLDYYYHFFAGMYHFRQKELILALNFYR
CCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
DAEKKLDSFDCDELEKAEFYFKASEVYYHMKQTIFSMNYASRAYNLFKKYDTYGERRVQS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QFIIAGNWLDHMYPEKALHNLNKELKESETQGILHLMGSSHLNIGICYNKLEDVDKATYN
EEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
FQRALNLYKEEKHSFLPKTLFNLAHVRAKQGKLSITDDLYYEGKELAEKNKNLDMLAKFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCHHHHHCCCCHHHHHHHH
LIKGLYLSFDLDMVRESFKFFESKGKYADMEEYGLIAAELLEKKEKIRDAVEFYRITVNA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRQIQRSAFLHVN
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]