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The map label for this gene is ythA [H]

Identifier: 52786939

GI number: 52786939

Start: 3095038

End: 3096363

Strand: Direct

Name: ythA [H]

Synonym: BLi03215

Alternate gene names: 52786939

Gene position: 3095038-3096363 (Clockwise)

Preceding gene: 52786937

Following gene: 52786940

Centisome position: 73.3

GC content: 49.1

Gene sequence:

>1326_bases
ATGAATGACTTGATTTTTGCAAGAAGCCTTTTCGGAACAACGATGGGATTCCATATTATTTTTGCCTCGCTCGGTGTCGG
AATTCCTTTGATGATTTTGCTGGCCGAGCTGATCTATCAAAGAACGAAAGATCCCCACTACGCCATTATGGCCAAAAGAT
GGACGAAGGCGCAGGCCGTGTTGCTCGGGGTCGCCATACCGACCGGAACCATTGCCGGCACGCAGCTAGCCCTGCTCTGG
CCGGGATTCATGGAAGTGATCGGAAAAGTCATGTCCCTTCCATTTCAAATTGAAATCTACGCCTTTTTTATTGAGGCTTT
ATTTATGTCCATTTATGTTTACGCAGCCGATCGGCTGACTCCACTTATGAGAATTACAGCCGTCATTTTTATCGTTATCG
GAGCAGCCGCATCGGCCATCTTGATTACAAATGTGCACGCTTTTCAGGGAACGCCAGAAGGCTTCAAAATTGTAAACGGT
GAAATTACGGATGTTCAGCCGTGGACGGCGTTCTTCAACAAAAGCTTTGTGGCCACAGCAGGACATGTTGTCGTCTCCGC
TTTTATGACAGGTGCGTTTATTATTGCGACGATAGCCGCCTACAAAATGCTCCGAAACCGCGGCGATGATAGAGTCTACG
CCCTTCATAGGAAAGCGCTGCTGCTCGGGCTGATTGTCGGAGGAGCGTTTTCTCTGGTCACGGCTCTGAGCGGGCACGAA
TCCGCACAGCTACTTCACCGCTACCAGCCTGAAAAACTGGCGGGCGCAGAAGGGCTGTTTGAAACCCAGTCCCATGCTCC
TCTTGCGATCGGCGGATTTACTGATGAAAAGACGCAATCGGTGAAATGGGCGATTGAGATTCCGTGGGCTTTAAGCTTTT
TGGCCGACAACCGCTTTGACACCGTCGTAAAAGGGCTGAATGACTTTCCAAGGGATGAGTGGCCTCCCCTGTTCATTCAT
ACCTTATTTAACGGCATGGTTTTTATCGGCAGCCTTTTGATTGTTTATGCCGCTGTGGGTTTTATTTGGAGAAAAGTCAT
GAAAAAAGACCGCTTTCCCCGCTGGATGCTGGCCGTGTTCATAACCGGCGGCCCGCTCGCATTGCTCGCAATCGAACTTG
GCTGGGTATTCGCTTGCACCGGAAGGCAGCCTTGGGTCATTTACCATATGCAGAAAACGTCGGAAGTAGTGACCACCTCC
GGCTCGATCGGCATATTGTTTCTTTTGTTCTTTATCGTCTATATCATTTTAGGAGCAGCGGTGGTGTTCGTATTGCAATA
TTACTTTAAACGCCATCCTGTTGAAGAGGACTTAAAAAGCAGCTGA

Upstream 100 bases:

>100_bases
TAATCCCTTTATCCATTTTAACCTCCTACAGGAAGAATAATCTAAAAAAGGCGGTAAACAATAAAAAGCAAAATGGTGTA
AATGAAAGGTGGTTTTCCGG

Downstream 100 bases:

>100_bases
ATGCACAAAAAAAACAGAAGGGAAGTCATATGATGCAACTGGATGGAACAACAGATGCCCTGCTGGCTATTTCGATCGTC
TGGGGATTTATATTTATATA

Product: YthA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MNDLIFARSLFGTTMGFHIIFASLGVGIPLMILLAELIYQRTKDPHYAIMAKRWTKAQAVLLGVAIPTGTIAGTQLALLW
PGFMEVIGKVMSLPFQIEIYAFFIEALFMSIYVYAADRLTPLMRITAVIFIVIGAAASAILITNVHAFQGTPEGFKIVNG
EITDVQPWTAFFNKSFVATAGHVVVSAFMTGAFIIATIAAYKMLRNRGDDRVYALHRKALLLGLIVGGAFSLVTALSGHE
SAQLLHRYQPEKLAGAEGLFETQSHAPLAIGGFTDEKTQSVKWAIEIPWALSFLADNRFDTVVKGLNDFPRDEWPPLFIH
TLFNGMVFIGSLLIVYAAVGFIWRKVMKKDRFPRWMLAVFITGGPLALLAIELGWVFACTGRQPWVIYHMQKTSEVVTTS
GSIGILFLLFFIVYIILGAAVVFVLQYYFKRHPVEEDLKSS

Sequences:

>Translated_441_residues
MNDLIFARSLFGTTMGFHIIFASLGVGIPLMILLAELIYQRTKDPHYAIMAKRWTKAQAVLLGVAIPTGTIAGTQLALLW
PGFMEVIGKVMSLPFQIEIYAFFIEALFMSIYVYAADRLTPLMRITAVIFIVIGAAASAILITNVHAFQGTPEGFKIVNG
EITDVQPWTAFFNKSFVATAGHVVVSAFMTGAFIIATIAAYKMLRNRGDDRVYALHRKALLLGLIVGGAFSLVTALSGHE
SAQLLHRYQPEKLAGAEGLFETQSHAPLAIGGFTDEKTQSVKWAIEIPWALSFLADNRFDTVVKGLNDFPRDEWPPLFIH
TLFNGMVFIGSLLIVYAAVGFIWRKVMKKDRFPRWMLAVFITGGPLALLAIELGWVFACTGRQPWVIYHMQKTSEVVTTS
GSIGILFLLFFIVYIILGAAVVFVLQYYFKRHPVEEDLKSS
>Mature_441_residues
MNDLIFARSLFGTTMGFHIIFASLGVGIPLMILLAELIYQRTKDPHYAIMAKRWTKAQAVLLGVAIPTGTIAGTQLALLW
PGFMEVIGKVMSLPFQIEIYAFFIEALFMSIYVYAADRLTPLMRITAVIFIVIGAAASAILITNVHAFQGTPEGFKIVNG
EITDVQPWTAFFNKSFVATAGHVVVSAFMTGAFIIATIAAYKMLRNRGDDRVYALHRKALLLGLIVGGAFSLVTALSGHE
SAQLLHRYQPEKLAGAEGLFETQSHAPLAIGGFTDEKTQSVKWAIEIPWALSFLADNRFDTVVKGLNDFPRDEWPPLFIH
TLFNGMVFIGSLLIVYAAVGFIWRKVMKKDRFPRWMLAVFITGGPLALLAIELGWVFACTGRQPWVIYHMQKTSEVVTTS
GSIGILFLLFFIVYIILGAAVVFVLQYYFKRHPVEEDLKSS

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=313, Percent_Identity=26.517571884984, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1787212, Length=322, Percent_Identity=26.3975155279503, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 48915; Mature: 48915

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLIFARSLFGTTMGFHIIFASLGVGIPLMILLAELIYQRTKDPHYAIMAKRWTKAQAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHE
LLGVAIPTGTIAGTQLALLWPGFMEVIGKVMSLPFQIEIYAFFIEALFMSIYVYAADRLT
EEEEECCCCCCCCCCHHHHCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
PLMRITAVIFIVIGAAASAILITNVHAFQGTPEGFKIVNGEITDVQPWTAFFNKSFVATA
HHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCEEECCEECCCCHHHHHHCCCHHHHH
GHVVVSAFMTGAFIIATIAAYKMLRNRGDDRVYALHRKALLLGLIVGGAFSLVTALSGHE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SAQLLHRYQPEKLAGAEGLFETQSHAPLAIGGFTDEKTQSVKWAIEIPWALSFLADNRFD
HHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHCCHHH
TVVKGLNDFPRDEWPPLFIHTLFNGMVFIGSLLIVYAAVGFIWRKVMKKDRFPRWMLAVF
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ITGGPLALLAIELGWVFACTGRQPWVIYHMQKTSEVVTTSGSIGILFLLFFIVYIILGAA
ECCCCHHHHHHHHCEEEEECCCCCEEEEEECCCCHHEECCCCHHHHHHHHHHHHHHHHHH
VVFVLQYYFKRHPVEEDLKSS
HHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MNDLIFARSLFGTTMGFHIIFASLGVGIPLMILLAELIYQRTKDPHYAIMAKRWTKAQAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHE
LLGVAIPTGTIAGTQLALLWPGFMEVIGKVMSLPFQIEIYAFFIEALFMSIYVYAADRLT
EEEEECCCCCCCCCCHHHHCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
PLMRITAVIFIVIGAAASAILITNVHAFQGTPEGFKIVNGEITDVQPWTAFFNKSFVATA
HHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCEEECCEECCCCHHHHHHCCCHHHHH
GHVVVSAFMTGAFIIATIAAYKMLRNRGDDRVYALHRKALLLGLIVGGAFSLVTALSGHE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SAQLLHRYQPEKLAGAEGLFETQSHAPLAIGGFTDEKTQSVKWAIEIPWALSFLADNRFD
HHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHCCHHH
TVVKGLNDFPRDEWPPLFIHTLFNGMVFIGSLLIVYAAVGFIWRKVMKKDRFPRWMLAVF
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ITGGPLALLAIELGWVFACTGRQPWVIYHMQKTSEVVTTSGSIGILFLLFFIVYIILGAA
ECCCCHHHHHHHHCEEEEECCCCCEEEEEECCCCHHEECCCCHHHHHHHHHHHHHHHHHH
VVFVLQYYFKRHPVEEDLKSS
HHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]