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The map label for this gene is ytmP [H]

Identifier: 52786868

GI number: 52786868

Start: 3024298

End: 3025101

Strand: Reverse

Name: ytmP [H]

Synonym: BLi03143

Alternate gene names: 52786868

Gene position: 3025101-3024298 (Counterclockwise)

Preceding gene: 52786869

Following gene: 52786866

Centisome position: 71.64

GC content: 49.25

Gene sequence:

>804_bases
ATGAACTGGTTGGGACAATTACTAGGTAGCGAATGGGAGATTTCCCCCGCAGGAGGAGCTACAGGAGACGCATATTATGC
AGAACATAATGGACAGCAGCTTTTTTTAAAGCGCAACAGCTCTCCTTTTTTGGCTGTCCTGTCCGCGGAAGGAATTGTTC
CTAAGCTCGTTTGGACAAAACGAATGGAAAACGGGGATGTGATTACGGCACAGCACTGGCTCAAGGGAAGAGAGCTGAAG
CCGAAGGATATGAACAGCCAGGCGGTGGCTGAGATGCTTCGGAAAATTCACAGCTCCAAAGAGCTTTTGGATATGCTGAA
GAGACTCGGCAAACAGCCTTTTCAGCCAAGCTCTGTAATCACTCAATTGAAGCAGTTTATCCAGGCCCGGCAATATCCGA
TACCGCAGCTGGACCAGGCCCTTTTGTATCTGGAGCACCATCTTGAAGATGTACAGTCCGGAGAAAAGGTCGTCTGTCAC
TGCGATGTCAATCATAATAATTGGCTTCTTACAGATCAGAACCAGCTTTATTTAATCGATTGGGATGGAGCGATGATTGC
AGACCCCGCGATCGATCTGGGGCCGCTTCTTTATCATTACGTTGAAGAGCGGGAATGGGGAAGCTGGCTCGAACGCTACG
GCTCTTCTCTTACAGACAATCTCAGGCTGAGAATGGCCTGGTACGTATTGGCGGAAAAAGCAATGACGACACTCTGGCAA
AAAGCGAAAGGCAATCAGGAAGGCTTTCACCAGGGGCTGGAACAGCTGCATGAATTAATGGAGCGTCTCGCCAGGTCCTC
ATGA

Upstream 100 bases:

>100_bases
TTTGAATATAAAGAGACGACAATACAAGCAGTTTGCTGCCCGCTCTAGGGGGCAGATGCTTTTTAAAATCTTTTAATGAA
ATGATGGGTTGAAAATCGAT

Downstream 100 bases:

>100_bases
AAATGAGTCGATATCTTCCACCCATTGCGTGAGATAATCCTGGTGCTCCTGAATGTGGTTGTTGATCGAAGCGGAAGATC
TTCCCTTCTGGCTGTACAAA

Product: YtmP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNWLGQLLGSEWEISPAGGATGDAYYAEHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVITAQHWLKGRELK
PKDMNSQAVAEMLRKIHSSKELLDMLKRLGKQPFQPSSVITQLKQFIQARQYPIPQLDQALLYLEHHLEDVQSGEKVVCH
CDVNHNNWLLTDQNQLYLIDWDGAMIADPAIDLGPLLYHYVEEREWGSWLERYGSSLTDNLRLRMAWYVLAEKAMTTLWQ
KAKGNQEGFHQGLEQLHELMERLARSS

Sequences:

>Translated_267_residues
MNWLGQLLGSEWEISPAGGATGDAYYAEHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVITAQHWLKGRELK
PKDMNSQAVAEMLRKIHSSKELLDMLKRLGKQPFQPSSVITQLKQFIQARQYPIPQLDQALLYLEHHLEDVQSGEKVVCH
CDVNHNNWLLTDQNQLYLIDWDGAMIADPAIDLGPLLYHYVEEREWGSWLERYGSSLTDNLRLRMAWYVLAEKAMTTLWQ
KAKGNQEGFHQGLEQLHELMERLARSS
>Mature_267_residues
MNWLGQLLGSEWEISPAGGATGDAYYAEHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVITAQHWLKGRELK
PKDMNSQAVAEMLRKIHSSKELLDMLKRLGKQPFQPSSVITQLKQFIQARQYPIPQLDQALLYLEHHLEDVQSGEKVVCH
CDVNHNNWLLTDQNQLYLIDWDGAMIADPAIDLGPLLYHYVEEREWGSWLERYGSSLTDNLRLRMAWYVLAEKAMTTLWQ
KAKGNQEGFHQGLEQLHELMERLARSS

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30708; Mature: 30708

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLGQLLGSEWEISPAGGATGDAYYAEHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTK
CCHHHHHCCCCCEECCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHH
RMENGDVITAQHWLKGRELKPKDMNSQAVAEMLRKIHSSKELLDMLKRLGKQPFQPSSVI
HCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
TQLKQFIQARQYPIPQLDQALLYLEHHLEDVQSGEKVVCHCDVNHNNWLLTDQNQLYLID
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCEEEEEE
WDGAMIADPAIDLGPLLYHYVEEREWGSWLERYGSSLTDNLRLRMAWYVLAEKAMTTLWQ
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KAKGNQEGFHQGLEQLHELMERLARSS
HHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNWLGQLLGSEWEISPAGGATGDAYYAEHNGQQLFLKRNSSPFLAVLSAEGIVPKLVWTK
CCHHHHHCCCCCEECCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHH
RMENGDVITAQHWLKGRELKPKDMNSQAVAEMLRKIHSSKELLDMLKRLGKQPFQPSSVI
HCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
TQLKQFIQARQYPIPQLDQALLYLEHHLEDVQSGEKVVCHCDVNHNNWLLTDQNQLYLID
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCEEEEEE
WDGAMIADPAIDLGPLLYHYVEEREWGSWLERYGSSLTDNLRLRMAWYVLAEKAMTTLWQ
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KAKGNQEGFHQGLEQLHELMERLARSS
HHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]