Click here to switch to the map view.

The map label for this gene is yttP [H]

Identifier: 52786833

GI number: 52786833

Start: 2992372

End: 2993010

Strand: Reverse

Name: yttP [H]

Synonym: BLi03107

Alternate gene names: 52786833

Gene position: 2993010-2992372 (Counterclockwise)

Preceding gene: 52786835

Following gene: 52786831

Centisome position: 70.88

GC content: 42.57

Gene sequence:

>639_bases
ATGGGATCAAACGCTACTCCAACCACGAAGGACAGGATCATCGAATCTGCCGTGGAACTGTTCAACCAAAAAGGTTTTTC
AGGAACATCAGTCCGCGAAATTGCCCGAGCAGCCAATGTCAATGTCGCCCACATCTCCTATTATTTTAATGGAAAAGGCG
GGTTAATGGAGCATTTAGTATCCCGTTTTTATGAAGGCTATTTAAGAATCCTTGAAAAGGGCCATGAACGCCTTCAGGAT
GCAGGTGCAACGGATTGCCTTCTTCAATTGGTTTTTGATATTCTATCGTATCAGCATGAACATCGTCAATTAACTCGGTT
TGTCTATCGCGAAGTCACGATTGATTCCACACTGAATCGTGAAGTGATGTCGACATATTTAACGAAAGAAAAGTACATTC
TCCATCTGATCATTGAAAAGGGAAATGAGGACAACGAATTTTCCCGTTTTCCCCTTTCCCATTTTATGATTCAGCTGAAG
TCGCTTTTAATGATGCCTTATCTGCAGCCTCAATATATTTCAGAAGTGCTTTATGTACAGCCGCACGAGCCGTACTTTTA
TCAGGCGTATTACAAGGAAGTCAAAACATGGCTTCTCAGTCTGTTGTACAGAGAGCGTCGGCAAGCCGCCGTTATTTAA

Upstream 100 bases:

>100_bases
GGCAAAAACGCGCTTGCCGTGATGCTATTTGTCGAGCGCTTTTTACAGGAACAACTCCGCTTGAAGTGGAATTGTTTTAA
GTAAGAAGGGGTGAAACAAG

Downstream 100 bases:

>100_bases
CAAAGCGGCTCTCAAAATGTTCGTAACCAAATCCGGCATCCTCTGCTTGGTGGGCGTCAGACCCAAAGACAAGCGGGATG
TTTTTTTGTTCCGCTTCTTT

Product: YttP

Products: NA

Alternate protein names: Stress response protein yttP [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGSNATPTTKDRIIESAVELFNQKGFSGTSVREIARAANVNVAHISYYFNGKGGLMEHLVSRFYEGYLRILEKGHERLQD
AGATDCLLQLVFDILSYQHEHRQLTRFVYREVTIDSTLNREVMSTYLTKEKYILHLIIEKGNEDNEFSRFPLSHFMIQLK
SLLMMPYLQPQYISEVLYVQPHEPYFYQAYYKEVKTWLLSLLYRERRQAAVI

Sequences:

>Translated_212_residues
MGSNATPTTKDRIIESAVELFNQKGFSGTSVREIARAANVNVAHISYYFNGKGGLMEHLVSRFYEGYLRILEKGHERLQD
AGATDCLLQLVFDILSYQHEHRQLTRFVYREVTIDSTLNREVMSTYLTKEKYILHLIIEKGNEDNEFSRFPLSHFMIQLK
SLLMMPYLQPQYISEVLYVQPHEPYFYQAYYKEVKTWLLSLLYRERRQAAVI
>Mature_211_residues
GSNATPTTKDRIIESAVELFNQKGFSGTSVREIARAANVNVAHISYYFNGKGGLMEHLVSRFYEGYLRILEKGHERLQDA
GATDCLLQLVFDILSYQHEHRQLTRFVYREVTIDSTLNREVMSTYLTKEKYILHLIIEKGNEDNEFSRFPLSHFMIQLKS
LLMMPYLQPQYISEVLYVQPHEPYFYQAYYKEVKTWLLSLLYRERRQAAVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24935; Mature: 24804

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNATPTTKDRIIESAVELFNQKGFSGTSVREIARAANVNVAHISYYFNGKGGLMEHLV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHH
SRFYEGYLRILEKGHERLQDAGATDCLLQLVFDILSYQHEHRQLTRFVYREVTIDSTLNR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMSTYLTKEKYILHLIIEKGNEDNEFSRFPLSHFMIQLKSLLMMPYLQPQYISEVLYVQ
HHHHHHHHHHHHHHHHEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PHEPYFYQAYYKEVKTWLLSLLYRERRQAAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSNATPTTKDRIIESAVELFNQKGFSGTSVREIARAANVNVAHISYYFNGKGGLMEHLV
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHH
SRFYEGYLRILEKGHERLQDAGATDCLLQLVFDILSYQHEHRQLTRFVYREVTIDSTLNR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMSTYLTKEKYILHLIIEKGNEDNEFSRFPLSHFMIQLKSLLMMPYLQPQYISEVLYVQ
HHHHHHHHHHHHHHHHEEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PHEPYFYQAYYKEVKTWLLSLLYRERRQAAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 11988534 [H]