| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
Click here to switch to the map view.
The map label for this gene is 52786510
Identifier: 52786510
GI number: 52786510
Start: 2666933
End: 2668039
Strand: Reverse
Name: 52786510
Synonym: BLi02775
Alternate gene names: NA
Gene position: 2668039-2666933 (Counterclockwise)
Preceding gene: 52786511
Following gene: 52786509
Centisome position: 63.18
GC content: 38.3
Gene sequence:
>1107_bases ATGAATGATTTACAATTAGATACACCAGCTCTTTTAATCGATAAAGACGTGATGTTAAGCAATATGAAGGATATGCAAAA TTACGCTAACGAACAGAAGGTAAGCTTACGCCCTCATACAAAAACACATAAAATGCCTAAATTAGCTAAACTGCAAGAAG AGATGGGAGCTGTAGGAATCGCTGTAGCGAAAGTAGGAGAAGCTGAAGTGATGGCGAGAAATGGCTTAAAAGATATCTTT ATCGCAAATGAAATTGTTGGGAAATCAAAGCTTGAACGTATTAGAAAACTATCTGAAACGATTGATATCTCTTTTGGAAT CGATAGTGCGTATCAAGTACGTGAAATTGAAGAAGTATTTGAAGGAGCTTCAAAGAAAGCCCAAGTGTTGGTGGAAATTG AAGTAGGAGAACAACGCTCCGGAATTATTGAAGAAGATGATTTTCGTACTTTATTAGAATTAATCAAAACGTGTCAAAAT GTCGAGCTAAAAGGAATCTTCTCACATGACGGACATTCTTATAAAGCGAAAAGTGTAGCCCATTGTAAAGAACTCTATAA AGAAAGTGTAGAACGAACATTACATTTCGCCCGAATTGCGGAAGAAATGGATCTAAAGCCGAAAGTGGTTAGTATTGGCT CTACTCCTCCCTTCATGTTTAAGTTTGATATTCCAGAAGGGGTGACAGAAATCAGACCTGGCACTTACATTTTTATGGAC GCCTCACAAGCAAATGTAATTGGTACGTATGATCGCTGTGCTGCTTCTGTACTCACAACCGTGATTAGTAAACCAACAAA AGAACGAGTCATTACAGACGTAGGGGCCAAGGGAATTACCGCCCAAACACGAAGCGAAGGGCTTACTGCAACCAAAGGGC TTGGCCGTATCAAAGAATACGAGGACGTTTATATTCATGGCGTATTCGACGAACATGCTATTATTTATCATGAAGAATTC AACAAAAAAGTAAGCATTGGAGATAAGGTGCGAATTATTCCAAATCATATCTGCCCAGTATGCAACTTGCACGATAAAGC CTATTTAGTCGATAATGGAGAGGTTGTAGATGAATTAAATATTGAAGCTAGAGGAAGACTTCAATAA
Upstream 100 bases:
>100_bases GCAATCATAAACCGGCAAGAGTAGTTGTTCCATCAAATCATTTATATGCCGGGTGTCTTGTTGAAGTTGAAGCCATTGCA GCGATAAAGGAGGAGGCACA
Downstream 100 bases:
>100_bases TTTAAAAAATAAGGGGAGATGGCATGAGTCCGAATCATCACAAACTATTTTACAAAGATCCCTATCTAAAAACGTTTGAA ACGAAAATCTTGAAACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNDLQLDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGIAVAKVGEAEVMARNGLKDIF IANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVFEGASKKAQVLVEIEVGEQRSGIIEEDDFRTLLELIKTCQN VELKGIFSHDGHSYKAKSVAHCKELYKESVERTLHFARIAEEMDLKPKVVSIGSTPPFMFKFDIPEGVTEIRPGTYIFMD ASQANVIGTYDRCAASVLTTVISKPTKERVITDVGAKGITAQTRSEGLTATKGLGRIKEYEDVYIHGVFDEHAIIYHEEF NKKVSIGDKVRIIPNHICPVCNLHDKAYLVDNGEVVDELNIEARGRLQ
Sequences:
>Translated_368_residues MNDLQLDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGIAVAKVGEAEVMARNGLKDIF IANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVFEGASKKAQVLVEIEVGEQRSGIIEEDDFRTLLELIKTCQN VELKGIFSHDGHSYKAKSVAHCKELYKESVERTLHFARIAEEMDLKPKVVSIGSTPPFMFKFDIPEGVTEIRPGTYIFMD ASQANVIGTYDRCAASVLTTVISKPTKERVITDVGAKGITAQTRSEGLTATKGLGRIKEYEDVYIHGVFDEHAIIYHEEF NKKVSIGDKVRIIPNHICPVCNLHDKAYLVDNGEVVDELNIEARGRLQ >Mature_368_residues MNDLQLDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGIAVAKVGEAEVMARNGLKDIF IANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVFEGASKKAQVLVEIEVGEQRSGIIEEDDFRTLLELIKTCQN VELKGIFSHDGHSYKAKSVAHCKELYKESVERTLHFARIAEEMDLKPKVVSIGSTPPFMFKFDIPEGVTEIRPGTYIFMD ASQANVIGTYDRCAASVLTTVISKPTKERVITDVGAKGITAQTRSEGLTATKGLGRIKEYEDVYIHGVFDEHAIIYHEEF NKKVSIGDKVRIIPNHICPVCNLHDKAYLVDNGEVVDELNIEARGRLQ
Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine
COG id: COG3616
COG function: function code E; Predicted amino acid aldolase or racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DSD1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001608 [H]
Pfam domain/function: PF01168 Ala_racemase_N [H]
EC number: =4.1.2.42 [H]
Molecular weight: Translated: 41193; Mature: 41193
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLQLDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGI CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCCHHHHHHHHHCCCEE AVAKVGEAEVMARNGLKDIFIANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVF EEECCCCHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH EGASKKAQVLVEIEVGEQRSGIIEEDDFRTLLELIKTCQNVELKGIFSHDGHSYKAKSVA CCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH HCKELYKESVERTLHFARIAEEMDLKPKVVSIGSTPPFMFKFDIPEGVTEIRPGTYIFMD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHCCCCEEEEEE ASQANVIGTYDRCAASVLTTVISKPTKERVITDVGAKGITAQTRSEGLTATKGLGRIKEY CCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHCC EDVYIHGVFDEHAIIYHEEFNKKVSIGDKVRIIPNHICPVCNLHDKAYLVDNGEVVDELN CEEEEEEEECCCEEEEEHHCCCEECCCCEEEECCCCCCCCCCCCCCEEEEECCCEEEECC IEARGRLQ CCCCCCCC >Mature Secondary Structure MNDLQLDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGI CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCCHHHHHHHHHCCCEE AVAKVGEAEVMARNGLKDIFIANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVF EEECCCCHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH EGASKKAQVLVEIEVGEQRSGIIEEDDFRTLLELIKTCQNVELKGIFSHDGHSYKAKSVA CCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH HCKELYKESVERTLHFARIAEEMDLKPKVVSIGSTPPFMFKFDIPEGVTEIRPGTYIFMD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHCCCCEEEEEE ASQANVIGTYDRCAASVLTTVISKPTKERVITDVGAKGITAQTRSEGLTATKGLGRIKEY CCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHCC EDVYIHGVFDEHAIIYHEEFNKKVSIGDKVRIIPNHICPVCNLHDKAYLVDNGEVVDELN CEEEEEEEECCCEEEEEHHCCCEECCCCEEEECCCCCCCCCCCCCCEEEEECCCEEEECC IEARGRLQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9642221 [H]