| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is ctpA [H]
Identifier: 52786025
GI number: 52786025
Start: 2238111
End: 2239508
Strand: Reverse
Name: ctpA [H]
Synonym: BLi02281
Alternate gene names: 52786025
Gene position: 2239508-2238111 (Counterclockwise)
Preceding gene: 52786028
Following gene: 52786020
Centisome position: 53.04
GC content: 47.14
Gene sequence:
>1398_bases TTGAAACAGCAGTTGAAACTCTTTTTGGCTGTATTGATTACGGCCGTCGCCGCCTCCGCACTGACGCTTTATCTGGTGGG CAAAGGCAGCGGCGGTTCAGTATATTCCGCTTCAGATTCCGAGAAATTCGAAAAGCTGATGGCGGCGTACGACAAAATCA AGAGCGACTATTATCAAAATGCAGACGATGAAAAGCTGACTGACGGCGCGATTAAAGGGATGCTTGGAGCTTTGGATGAT CCATATTCTACATACATGGATAAGAAAGAAGCTAAAAGCTTTGAAGAAAGCATTACATCTTCTTTTGAAGGAATCGGCGC CCAAGTAGAAGAAAAAAATGGACAAATTCTAATCGTCGCGCCTATTAAAGGATCTCCCGCAGAAAAAGCCGGCTTAAAGC CGCATGATGAAATTCAGAAAGTGGACGGCAAAAGCGTAAAAGGCAAGACCGTCAACGAAGCGACAGCGATGATCCGCGGC AAAAAAGGCACGAATGTCAAACTTGTTCTCAACAGGGAAGGCGTCGGCCAAATCGATGTTACGATTAAGCGCGATACGAT TCCGATCGAAACGGTTTATTCCAAAATGATCGACGGCAATATCGGTGAAATCCAAATTACGTCTTTCTCTGAAAATACCG CAAAAGAACTGACAAAAGCCATTGATGACTTGTCTGAAAAAGGTGCGGAACGATTCGTGCTGGATCTCAGAGGAAATCCA GGCGGGCTGATGGACCAAGCGATTATGATGAGCAACATGTTTGTCGATAAAGGCAAAACCATCATGCAGGTTGAATCCAA AAACGGAAAAAAAGAAGTGTACAAAGCTGAGAAGGAGCGAAAAGTGAACAAGCCGACCGTTGTTCTCGTCAACGGAGGAA CGGCAAGCGCCGCTGAGATCATGGCCGCAGCACTTCACCAGTCTTCAGGCATCCCGATCGTCGGTGAAAATACGTTTGGG AAAGGGACGGTTCAAAATGCGGAGAGCTTCTCCGACGGATCGACCGTCAAGCTGACGATTGCCAAGTGGCTGACGCCGAA TGGGGACTGGATTCACGAAAAAGGAATCAAACCTCAATATAAAGCGGAGCTCCCAAGCTATGCCAAACTGCCGTACCTGG ATTCCAAAAAAGAGTATAAGGCAGGCAGCACCGGAGACGAAGTGAAAGCCGCCCAGCAAATGCTTCAAGCGCTCGGCTAT AAGCTGAATGCGACTGGAGCTTTCGACGCACAGACGGAAGCTGCCGTTAAGGCTTTTCAAAAAGACCAAAAGCTGAAAAC GACAGGCATCCTAACGGGCGAGACGACAATCAGCCTGACAAGCAAGCTGCAGGATAAGCTTTCCGACAATGATACGCAGT TGGATAAAGCGATTGAGATCTTAAAAAAAGAGAAATAA
Upstream 100 bases:
>100_bases CGAATGCCAGCATCCCGGAAAAATCGGTATTTAAGTGATTCGAGTTGACGAATAAAGATTCGTCCATGATAATATGGTAA GAAGAAAAGGTGGTGTTCGT
Downstream 100 bases:
>100_bases AAGAAACCCTTGCGCTCACACTGAACTGACCCGTTAAAATGAGACTTAGAAAAAACACCTATGCTGCCTGTCCCCTGTAT TCCAGTGGGGACAGGTAGTT
Product: CtpA
Products: NA
Alternate protein names: C-terminal processing protease [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKQQLKLFLAVLITAVAASALTLYLVGKGSGGSVYSASDSEKFEKLMAAYDKIKSDYYQNADDEKLTDGAIKGMLGALDD PYSTYMDKKEAKSFEESITSSFEGIGAQVEEKNGQILIVAPIKGSPAEKAGLKPHDEIQKVDGKSVKGKTVNEATAMIRG KKGTNVKLVLNREGVGQIDVTIKRDTIPIETVYSKMIDGNIGEIQITSFSENTAKELTKAIDDLSEKGAERFVLDLRGNP GGLMDQAIMMSNMFVDKGKTIMQVESKNGKKEVYKAEKERKVNKPTVVLVNGGTASAAEIMAAALHQSSGIPIVGENTFG KGTVQNAESFSDGSTVKLTIAKWLTPNGDWIHEKGIKPQYKAELPSYAKLPYLDSKKEYKAGSTGDEVKAAQQMLQALGY KLNATGAFDAQTEAAVKAFQKDQKLKTTGILTGETTISLTSKLQDKLSDNDTQLDKAIEILKKEK
Sequences:
>Translated_465_residues MKQQLKLFLAVLITAVAASALTLYLVGKGSGGSVYSASDSEKFEKLMAAYDKIKSDYYQNADDEKLTDGAIKGMLGALDD PYSTYMDKKEAKSFEESITSSFEGIGAQVEEKNGQILIVAPIKGSPAEKAGLKPHDEIQKVDGKSVKGKTVNEATAMIRG KKGTNVKLVLNREGVGQIDVTIKRDTIPIETVYSKMIDGNIGEIQITSFSENTAKELTKAIDDLSEKGAERFVLDLRGNP GGLMDQAIMMSNMFVDKGKTIMQVESKNGKKEVYKAEKERKVNKPTVVLVNGGTASAAEIMAAALHQSSGIPIVGENTFG KGTVQNAESFSDGSTVKLTIAKWLTPNGDWIHEKGIKPQYKAELPSYAKLPYLDSKKEYKAGSTGDEVKAAQQMLQALGY KLNATGAFDAQTEAAVKAFQKDQKLKTTGILTGETTISLTSKLQDKLSDNDTQLDKAIEILKKEK >Mature_465_residues MKQQLKLFLAVLITAVAASALTLYLVGKGSGGSVYSASDSEKFEKLMAAYDKIKSDYYQNADDEKLTDGAIKGMLGALDD PYSTYMDKKEAKSFEESITSSFEGIGAQVEEKNGQILIVAPIKGSPAEKAGLKPHDEIQKVDGKSVKGKTVNEATAMIRG KKGTNVKLVLNREGVGQIDVTIKRDTIPIETVYSKMIDGNIGEIQITSFSENTAKELTKAIDDLSEKGAERFVLDLRGNP GGLMDQAIMMSNMFVDKGKTIMQVESKNGKKEVYKAEKERKVNKPTVVLVNGGTASAAEIMAAALHQSSGIPIVGENTFG KGTVQNAESFSDGSTVKLTIAKWLTPNGDWIHEKGIKPQYKAELPSYAKLPYLDSKKEYKAGSTGDEVKAAQQMLQALGY KLNATGAFDAQTEAAVKAFQKDQKLKTTGILTGETTISLTSKLQDKLSDNDTQLDKAIEILKKEK
Specific function: Involved In The Cleavage Of A C-Terminal Peptide Of 11 Residues From The Precursor Form Of Penicillin-Binding Protein 3 (Pbp3). May Be Involved In Protection Of The Bacterium From Thermal And Osmotic Stresses. [C]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Associated With The Periplasmic Protein Side Of The Cytoplasm Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=306, Percent_Identity=31.0457516339869, Blast_Score=115, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR002477 [H]
Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41; PF01471 PG_binding_1 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 50294; Mature: 50294
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQLKLFLAVLITAVAASALTLYLVGKGSGGSVYSASDSEKFEKLMAAYDKIKSDYYQN CCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCC ADDEKLTDGAIKGMLGALDDPYSTYMDKKEAKSFEESITSSFEGIGAQVEEKNGQILIVA CCCCHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE PIKGSPAEKAGLKPHDEIQKVDGKSVKGKTVNEATAMIRGKKGTNVKLVLNREGVGQIDV CCCCCCHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHEECCCCCEEEEEEECCCCCEEEE TIKRDTIPIETVYSKMIDGNIGEIQITSFSENTAKELTKAIDDLSEKGAERFVLDLRGNP EEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC GGLMDQAIMMSNMFVDKGKTIMQVESKNGKKEVYKAEKERKVNKPTVVLVNGGTASAAEI CCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH MAAALHQSSGIPIVGENTFGKGTVQNAESFSDGSTVKLTIAKWLTPNGDWIHEKGIKPQY HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCH KAELPSYAKLPYLDSKKEYKAGSTGDEVKAAQQMLQALGYKLNATGAFDAQTEAAVKAFQ HHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH KDQKLKTTGILTGETTISLTSKLQDKLSDNDTQLDKAIEILKKEK HCCCEEHEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKQQLKLFLAVLITAVAASALTLYLVGKGSGGSVYSASDSEKFEKLMAAYDKIKSDYYQN CCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCC ADDEKLTDGAIKGMLGALDDPYSTYMDKKEAKSFEESITSSFEGIGAQVEEKNGQILIVA CCCCHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE PIKGSPAEKAGLKPHDEIQKVDGKSVKGKTVNEATAMIRGKKGTNVKLVLNREGVGQIDV CCCCCCHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHEECCCCCEEEEEEECCCCCEEEE TIKRDTIPIETVYSKMIDGNIGEIQITSFSENTAKELTKAIDDLSEKGAERFVLDLRGNP EEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC GGLMDQAIMMSNMFVDKGKTIMQVESKNGKKEVYKAEKERKVNKPTVVLVNGGTASAAEI CCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH MAAALHQSSGIPIVGENTFGKGTVQNAESFSDGSTVKLTIAKWLTPNGDWIHEKGIKPQY HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCCCH KAELPSYAKLPYLDSKKEYKAGSTGDEVKAAQQMLQALGYKLNATGAFDAQTEAAVKAFQ HHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH KDQKLKTTGILTGETTISLTSKLQDKLSDNDTQLDKAIEILKKEK HCCCEEHEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8996100; 9734814; 9384377 [H]