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The map label for this gene is yisV [H]

Identifier: 52784954

GI number: 52784954

Start: 1190312

End: 1191082

Strand: Direct

Name: yisV [H]

Synonym: BLi01182

Alternate gene names: 52784954

Gene position: 1190312-1191082 (Clockwise)

Preceding gene: 52784953

Following gene: 52784955

Centisome position: 28.19

GC content: 52.53

Gene sequence:

>771_bases
ATGCGTTTTCAATTTTGCGGGCTTCCCATGGATGCCGGAGGATTAGACCCGTCCGTCATTCCGGCGGTAAAAAAACGGCA
TGGCGCCGATTTGTTGTACACGATTCCGTCATTTCACAATCCGACGGGCAAACTGATGTCCGAAGACCGGAAGCGCGAGC
TGATTCAAATCAGCAAGCAGCTGTCGCTCCCGGTTATTGAAGATGACGCATATGGCGATTTGCAGCTTGACGGCCCGCCG
TCGTCGCCGCTGAAGGCCATGGACAGAGAAGGCAGCATTCTTTATGTCGGCACATTATCGAAAACCGTCAGTCCCGGCCT
CCGCATCGGCTGGGTCGCAGGTCCGGAGCCCGTCATCGAGAGGCTGGCCGATATTAAAATGCAGACTGACTACGGATCAA
GTTCATTGTCGCAATGGGCGGCTGCAAAGTGGCTTTCAAGCGGGCTCTATGATGAAAATCTCAGCCGGATTAAAGTCGAA
CTGAGACAAAGGCGGGATGAAGCGCTCCGGTGTCTTGAGACCTATTGCAGAGGAATCGCCCGCTGGGAAAAGCCCTCAGG
CGGATTTTACATTTGGGTCACATTCCTAAAACCGCTCTCGCTCAGCGCTTTGTTCGAACAAGCATTACAGAAAAACATCC
TCATCAATCCCGGCACCCTCTACGATAAGGAAGCCAAATACAGCATCAGATTGTCCTATTCGTACGCCTCTTTGACAGAG
CTTCGCTACGGCATTCAAACAATCGCAGAACTCGCCGGTAAGCTCATGTGA

Upstream 100 bases:

>100_bases
GGCCACCCTGAGCGGGCTGTTGAGATGATCCTGCGGTCACAAAGGAACAACAGGAAGGAGGGCGTAAGGAAGCGTTCCCC
GCCCGGTGCCGCCTTTCTCC

Downstream 100 bases:

>100_bases
ACCCCGCTGTACCGGCTGCTGAAAAAGCGACGTTCAGCAGCCGCTCCGCTTTTTATTTCAGGCCTCAGGTTATTTAAAAA
CAGTCCATAAAATTCCATTA

Product: YisV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRFQFCGLPMDAGGLDPSVIPAVKKRHGADLLYTIPSFHNPTGKLMSEDRKRELIQISKQLSLPVIEDDAYGDLQLDGPP
SSPLKAMDREGSILYVGTLSKTVSPGLRIGWVAGPEPVIERLADIKMQTDYGSSSLSQWAAAKWLSSGLYDENLSRIKVE
LRQRRDEALRCLETYCRGIARWEKPSGGFYIWVTFLKPLSLSALFEQALQKNILINPGTLYDKEAKYSIRLSYSYASLTE
LRYGIQTIAELAGKLM

Sequences:

>Translated_256_residues
MRFQFCGLPMDAGGLDPSVIPAVKKRHGADLLYTIPSFHNPTGKLMSEDRKRELIQISKQLSLPVIEDDAYGDLQLDGPP
SSPLKAMDREGSILYVGTLSKTVSPGLRIGWVAGPEPVIERLADIKMQTDYGSSSLSQWAAAKWLSSGLYDENLSRIKVE
LRQRRDEALRCLETYCRGIARWEKPSGGFYIWVTFLKPLSLSALFEQALQKNILINPGTLYDKEAKYSIRLSYSYASLTE
LRYGIQTIAELAGKLM
>Mature_256_residues
MRFQFCGLPMDAGGLDPSVIPAVKKRHGADLLYTIPSFHNPTGKLMSEDRKRELIQISKQLSLPVIEDDAYGDLQLDGPP
SSPLKAMDREGSILYVGTLSKTVSPGLRIGWVAGPEPVIERLADIKMQTDYGSSSLSQWAAAKWLSSGLYDENLSRIKVE
LRQRRDEALRCLETYCRGIARWEKPSGGFYIWVTFLKPLSLSALFEQALQKNILINPGTLYDKEAKYSIRLSYSYASLTE
LRYGIQTIAELAGKLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=235, Percent_Identity=27.2340425531915, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI33469970, Length=235, Percent_Identity=27.2340425531915, Blast_Score=108, Evalue=4e-24,
Organism=Escherichia coli, GI1787710, Length=223, Percent_Identity=26.0089686098655, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790797, Length=229, Percent_Identity=26.2008733624454, Blast_Score=99, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321236, Length=268, Percent_Identity=23.8805970149254, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6321000, Length=252, Percent_Identity=23.015873015873, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356535, Length=247, Percent_Identity=25.9109311740891, Blast_Score=74, Evalue=9e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28638; Mature: 28638

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFQFCGLPMDAGGLDPSVIPAVKKRHGADLLYTIPSFHNPTGKLMSEDRKRELIQISKQ
CCEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LSLPVIEDDAYGDLQLDGPPSSPLKAMDREGSILYVGTLSKTVSPGLRIGWVAGPEPVIE
CCCCEEECCCCCCEEECCCCCCCHHHHCCCCCEEEEEECCHHCCCCCEEEECCCCHHHHH
RLADIKMQTDYGSSSLSQWAAAKWLSSGLYDENLSRIKVELRQRRDEALRCLETYCRGIA
HHHHCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWEKPSGGFYIWVTFLKPLSLSALFEQALQKNILINPGTLYDKEAKYSIRLSYSYASLTE
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEECHHHHHH
LRYGIQTIAELAGKLM
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFQFCGLPMDAGGLDPSVIPAVKKRHGADLLYTIPSFHNPTGKLMSEDRKRELIQISKQ
CCEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LSLPVIEDDAYGDLQLDGPPSSPLKAMDREGSILYVGTLSKTVSPGLRIGWVAGPEPVIE
CCCCEEECCCCCCEEECCCCCCCHHHHCCCCCEEEEEECCHHCCCCCEEEECCCCHHHHH
RLADIKMQTDYGSSSLSQWAAAKWLSSGLYDENLSRIKVELRQRRDEALRCLETYCRGIA
HHHHCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWEKPSGGFYIWVTFLKPLSLSALFEQALQKNILINPGTLYDKEAKYSIRLSYSYASLTE
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEECHHHHHH
LRYGIQTIAELAGKLM
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]