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The map label for this gene is yisS [H]

Identifier: 52784953

GI number: 52784953

Start: 1189177

End: 1190205

Strand: Direct

Name: yisS [H]

Synonym: BLi01181

Alternate gene names: 52784953

Gene position: 1189177-1190205 (Clockwise)

Preceding gene: 52784952

Following gene: 52784954

Centisome position: 28.16

GC content: 51.8

Gene sequence:

>1029_bases
ATGACAGAAGTTGTGAGATGCGCCGTATTGGGGCTTGGAAGGCTCGGCTATTACCATGCGAAAAACCTCAAAACCGAGGT
GCCCGGAGTCCTGCTCGCCGCTGTAGCCGATCCGGCAGAGGGAAGTGCGAGGGAGGTTGCAGCTGAACTGGGTGTTGAAA
AGTGGTTTGAAGACCCGTTTGAGTGCCTCCGCGATCCGGAAATTGATGCCGTTGTCATCGTTACACCGACATCCACTCAT
GCCGAAATGATCAAACAGGCAGCCGAATTCGGCAAACAGATTTTTGTGGAGAAGCCGCTGACATTAAATCTTGAAGAGTC
AATAGAAGTCATTTCCAAGGTCAAAGAAATGGGCGTGATTTGCCAGGTGGGGTTTATGAGGCGGTTTGATCCTGCTTATG
CGGATGCCAAAAGAAGGATCGATGCCGGAGAGATCGGCAAACCGATCTATTATAAAGGGTTTACGCGCGATTTTGGCTCT
CCTCCGGCCGAATTCATCAAAAAAAGCGGCGGTATTTTCGTCGATTGTTCGATTCATGACTATGACATCGCTCGTTATTT
AATGGGGGCTGAAATCACTGCGGTTTCCGGCCACGGAAGGGTTTTGAAGCACGCATTCATGCCGGGATGCCATGACGTCG
ATCAGGCGCTCACCTATATGGAGTTTGATTCGGGAGCGGCGGGTGATGCGGAAGCAAGCCGCAATTCGTCTTACGGCCAC
GATATCCGCGCCGAAATCATCGGAACGGACGGCAGCATCTTCATCGGGATGCTGCGGAACCCGGCGGTTACAGTGCGGAC
CGGAAAGGGGAGCAGCTATAATATCATTCCCGATTTCCAGGCGAGGTTCCATGAAGCGTACTGTTTGGAGCTGCAGCATT
TTGCTGATTGTGTTCGCATCAAAACGAAACCGCTTGTGACTGAAGTGGATGCGGCGGTCAATCTTGAAATCGCGCTTGCG
GCCACACAATCCTGGTCAACAGGCAGGCCCGTCAAGATTCAGTATCAGACGAAAAAGCTTACGGTATGA

Upstream 100 bases:

>100_bases
TGCGGATAAAATAAATACAGGGTAAAATCAGAATTGAAATGAGCAAGCGCTTTCTCTAATTAATAAAGCGCTTTCATGAA
ACGCAAAGGAGGAGAAGAAA

Downstream 100 bases:

>100_bases
AACGGGGGCCACCCTGAGCGGGCTGTTGAGATGATCCTGCGGTCACAAAGGAACAACAGGAAGGAGGGCGTAAGGAAGCG
TTCCCCGCCCGGTGCCGCCT

Product: YisS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTEVVRCAVLGLGRLGYYHAKNLKTEVPGVLLAAVADPAEGSAREVAAELGVEKWFEDPFECLRDPEIDAVVIVTPTSTH
AEMIKQAAEFGKQIFVEKPLTLNLEESIEVISKVKEMGVICQVGFMRRFDPAYADAKRRIDAGEIGKPIYYKGFTRDFGS
PPAEFIKKSGGIFVDCSIHDYDIARYLMGAEITAVSGHGRVLKHAFMPGCHDVDQALTYMEFDSGAAGDAEASRNSSYGH
DIRAEIIGTDGSIFIGMLRNPAVTVRTGKGSSYNIIPDFQARFHEAYCLELQHFADCVRIKTKPLVTEVDAAVNLEIALA
ATQSWSTGRPVKIQYQTKKLTV

Sequences:

>Translated_342_residues
MTEVVRCAVLGLGRLGYYHAKNLKTEVPGVLLAAVADPAEGSAREVAAELGVEKWFEDPFECLRDPEIDAVVIVTPTSTH
AEMIKQAAEFGKQIFVEKPLTLNLEESIEVISKVKEMGVICQVGFMRRFDPAYADAKRRIDAGEIGKPIYYKGFTRDFGS
PPAEFIKKSGGIFVDCSIHDYDIARYLMGAEITAVSGHGRVLKHAFMPGCHDVDQALTYMEFDSGAAGDAEASRNSSYGH
DIRAEIIGTDGSIFIGMLRNPAVTVRTGKGSSYNIIPDFQARFHEAYCLELQHFADCVRIKTKPLVTEVDAAVNLEIALA
ATQSWSTGRPVKIQYQTKKLTV
>Mature_341_residues
TEVVRCAVLGLGRLGYYHAKNLKTEVPGVLLAAVADPAEGSAREVAAELGVEKWFEDPFECLRDPEIDAVVIVTPTSTHA
EMIKQAAEFGKQIFVEKPLTLNLEESIEVISKVKEMGVICQVGFMRRFDPAYADAKRRIDAGEIGKPIYYKGFTRDFGSP
PAEFIKKSGGIFVDCSIHDYDIARYLMGAEITAVSGHGRVLKHAFMPGCHDVDQALTYMEFDSGAAGDAEASRNSSYGHD
IRAEIIGTDGSIFIGMLRNPAVTVRTGKGSSYNIIPDFQARFHEAYCLELQHFADCVRIKTKPLVTEVDAAVNLEIALAA
TQSWSTGRPVKIQYQTKKLTV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=197, Percent_Identity=27.4111675126904, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082405, Length=292, Percent_Identity=25.6849315068493, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789848, Length=133, Percent_Identity=33.0827067669173, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37546; Mature: 37415

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVVRCAVLGLGRLGYYHAKNLKTEVPGVLLAAVADPAEGSAREVAAELGVEKWFEDPF
CCHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCHHHHHCCHH
ECLRDPEIDAVVIVTPTSTHAEMIKQAAEFGKQIFVEKPLTLNLEESIEVISKVKEMGVI
HHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEECCCCEECHHHHHHHHHHHHHCCHH
CQVGFMRRFDPAYADAKRRIDAGEIGKPIYYKGFTRDFGSPPAEFIKKSGGIFVDCSIHD
EEEHHHHHCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCEEEEEECCH
YDIARYLMGAEITAVSGHGRVLKHAFMPGCHDVDQALTYMEFDSGAAGDAEASRNSSYGH
HHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCC
DIRAEIIGTDGSIFIGMLRNPAVTVRTGKGSSYNIIPDFQARFHEAYCLELQHFADCVRI
CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
KTKPLVTEVDAAVNLEIALAATQSWSTGRPVKIQYQTKKLTV
CCCCCEEECCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
TEVVRCAVLGLGRLGYYHAKNLKTEVPGVLLAAVADPAEGSAREVAAELGVEKWFEDPF
CHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCHHHHHCCHH
ECLRDPEIDAVVIVTPTSTHAEMIKQAAEFGKQIFVEKPLTLNLEESIEVISKVKEMGVI
HHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHEEECCCCEECHHHHHHHHHHHHHCCHH
CQVGFMRRFDPAYADAKRRIDAGEIGKPIYYKGFTRDFGSPPAEFIKKSGGIFVDCSIHD
EEEHHHHHCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCEEEEEECCH
YDIARYLMGAEITAVSGHGRVLKHAFMPGCHDVDQALTYMEFDSGAAGDAEASRNSSYGH
HHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCC
DIRAEIIGTDGSIFIGMLRNPAVTVRTGKGSSYNIIPDFQARFHEAYCLELQHFADCVRI
CEEEEEEECCCCEEEEEECCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
KTKPLVTEVDAAVNLEIALAATQSWSTGRPVKIQYQTKKLTV
CCCCCEEECCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]