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The map label for this gene is yhfX [H]

Identifier: 52784525

GI number: 52784525

Start: 730089

End: 731240

Strand: Direct

Name: yhfX [H]

Synonym: BLi00725

Alternate gene names: 52784525

Gene position: 730089-731240 (Clockwise)

Preceding gene: 52784524

Following gene: 52784526

Centisome position: 17.29

GC content: 38.72

Gene sequence:

>1152_bases
ATGTTTTTGGAATCTACATTAAAATATAACAAAAAATTAATAGAGGCTGCATTGAGTTTTCATCAGCAGGGAATCATTTC
ACCTAACACTTATGTATTAGACTTGGACACCGTCAAAAAAAATGCAAAAGTGTTAAGTGAAAAAGCCAGAAAACAGGATA
TTGAACTGTTTTTTATGACAAAGCAATTTGGTCGTAATCCGTTGGTGGCACAAGCTATAGCCGAAAGCGGAATCGGCAAA
GCGGTTGCTGTAGACCCGTGGGAAGCAATCACACTCAGCCAAAATGGAATCAAAATTGGGCATGTCGGACATCTTGTTCA
AATACCTATTCATATGATACCCGCAATATTGGAGCTTCATCCTGATTATGTTACGGTTTTCAGCCTTGAAAATGCTCAAA
ACATTAATAGAGTCGCTAAGAAAATGGGAAGAAAACAAAAAGTTTTTTTGCGTATCGCAAACAAAGAGGATTATATATAT
AAAGGTCAAGAGGGAGGGTTCACTTTTGAGCAAATCGTTAAGGATATCGAATCGATTGAACAATTAGAAGGACTTGAAAT
TGCAGGTTTAACAAGCTTTCCTTGCATATTGATCCAAGACGGCCTTCCAGCAGTTACTCCGAATGTAGCATCCATGCAAA
CCGTAAAATCGTTTTTAATGGAAAGAGGGTATAAAAAGCTTGAGATGAATATGCCAAGTGCAACATCTTGTGCAACAATG
AAATTGTTAAAGGAAAATGGTGCAACTCAAGGCGAACCCGGCCATGCTTTAATTGGAACGACACCCATACATGCAACGAA
ACAACTTGCAGAAAGGCCTGCGATGGTATATGTAACCGAAGTGTCCCACATATCTAATCATCATGCTTATGTTTTCGGCG
GCGGTTTCTATCCGCGTTCACATATGAAAGCGGCGCTCGTTGGAACAAACAAAGATCATCTTAAGAAGGTTCAAGCTATT
GAAATGACGCCTGATCATATTGATTATTACGGTTCATTAAACACAGTTGAAGCAAAAGTCGGCGATACGGCAATATTTGC
TTTTCGTACACAAGTCTTTGTCACGAATGCACATATAGCCATCTTAAAAAACGTTGCTGAAGATCCTGAACTTATCGGTG
TATATGATTCTAAAGGAAATGTAATCGAGTGA

Upstream 100 bases:

>100_bases
ACATTGCTGCAACTTCTGCTGATTATCTAGGGCTTCGCAATACTGAAAACGGCAGTTCATTCCTTCATTTAATGCAAAAA
GGAAAAGAGGAGACATACTG

Downstream 100 bases:

>100_bases
ATGATCGTTATCGGCAGAAGTGCCTGAATAATGGATTGTCTTACTGAAAAAGGTGTGGCGAAAATGCTTGGCCTTTTTGC
AGTGCAGTTTAATACAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFLESTLKYNKKLIEAALSFHQQGIISPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGK
AVAVDPWEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQKVFLRIANKEDYIY
KGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVTPNVASMQTVKSFLMERGYKKLEMNMPSATSCATM
KLLKENGATQGEPGHALIGTTPIHATKQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVGTNKDHLKKVQAI
EMTPDHIDYYGSLNTVEAKVGDTAIFAFRTQVFVTNAHIAILKNVAEDPELIGVYDSKGNVIE

Sequences:

>Translated_383_residues
MFLESTLKYNKKLIEAALSFHQQGIISPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGK
AVAVDPWEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQKVFLRIANKEDYIY
KGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVTPNVASMQTVKSFLMERGYKKLEMNMPSATSCATM
KLLKENGATQGEPGHALIGTTPIHATKQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVGTNKDHLKKVQAI
EMTPDHIDYYGSLNTVEAKVGDTAIFAFRTQVFVTNAHIAILKNVAEDPELIGVYDSKGNVIE
>Mature_383_residues
MFLESTLKYNKKLIEAALSFHQQGIISPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGK
AVAVDPWEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQKVFLRIANKEDYIY
KGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVTPNVASMQTVKSFLMERGYKKLEMNMPSATSCATM
KLLKENGATQGEPGHALIGTTPIHATKQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVGTNKDHLKKVQAI
EMTPDHIDYYGSLNTVEAKVGDTAIFAFRTQVFVTNAHIAILKNVAEDPELIGVYDSKGNVIE

Specific function: Unknown

COG id: COG3457

COG function: function code E; Predicted amino acid racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789782, Length=386, Percent_Identity=39.6373056994819, Blast_Score=291, Evalue=5e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: NA

Molecular weight: Translated: 42334; Mature: 42334

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLESTLKYNKKLIEAALSFHQQGIISPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEE
KQFGRNPLVAQAIAESGIGKAVAVDPWEAITLSQNGIKIGHVGHLVQIPIHMIPAILELH
HHHCCCCHHHHHHHHCCCCCEEEECCCCEEEEECCCEEEECCCCEEEHHHHHHHHHHHCC
PDYVTVFSLENAQNINRVAKKMGRKQKVFLRIANKEDYIYKGQEGGFTFEQIVKDIESIE
CCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHH
QLEGLEIAGLTSFPCILIQDGLPAVTPNVASMQTVKSFLMERGYKKLEMNMPSATSCATM
HHCCCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHH
KLLKENGATQGEPGHALIGTTPIHATKQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRS
HHHHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEEEHHHCCCCEEEEEECCCCCHH
HMKAALVGTNKDHLKKVQAIEMTPDHIDYYGSLNTVEAKVGDTAIFAFRTQVFVTNAHIA
HCEEEEECCCHHHHHHHHHEECCCCHHHHCCCCCEEEECCCCEEEEEEEEEEEEECCHHH
ILKNVAEDPELIGVYDSKGNVIE
HHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MFLESTLKYNKKLIEAALSFHQQGIISPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEE
KQFGRNPLVAQAIAESGIGKAVAVDPWEAITLSQNGIKIGHVGHLVQIPIHMIPAILELH
HHHCCCCHHHHHHHHCCCCCEEEECCCCEEEEECCCEEEECCCCEEEHHHHHHHHHHHCC
PDYVTVFSLENAQNINRVAKKMGRKQKVFLRIANKEDYIYKGQEGGFTFEQIVKDIESIE
CCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHH
QLEGLEIAGLTSFPCILIQDGLPAVTPNVASMQTVKSFLMERGYKKLEMNMPSATSCATM
HHCCCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHH
KLLKENGATQGEPGHALIGTTPIHATKQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRS
HHHHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEEEHHHCCCCEEEEEECCCCCHH
HMKAALVGTNKDHLKKVQAIEMTPDHIDYYGSLNTVEAKVGDTAIFAFRTQVFVTNAHIA
HCEEEEECCCHHHHHHHHHEECCCCHHHHCCCCCEEEECCCCEEEEEEEEEEEEECCHHH
ILKNVAEDPELIGVYDSKGNVIE
HHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]