Click here to switch to the map view.

The map label for this gene is yhfW [H]

Identifier: 52784524

GI number: 52784524

Start: 728863

End: 730089

Strand: Direct

Name: yhfW [H]

Synonym: BLi00724

Alternate gene names: 52784524

Gene position: 728863-730089 (Clockwise)

Preceding gene: 52784523

Following gene: 52784525

Centisome position: 17.26

GC content: 39.93

Gene sequence:

>1227_bases
ATGAATAAAAGAGTCATTATCATAATATTAGACAGCTTAGGTGTCGGTTATATGGAAGATGCAAGCGATTATCATCCTTC
AGATGTTGGCGCCAATACTTTCTATCACATACTTGATACGGTGCCCTCTTTAAACATTCCGAATCTCGAAAAATTGGGTA
TTAATAAAATATTGCACCATCCTAAATTGAAAAAAACAGATCATATTGCCAGCTATGGTGTTTTAAACCTGATGCATCAA
GGAGCGGACAGTTTTGAAGGACATAATGAAATCATGGGAACAAAGCCTAAAAAGACATATTTAGCTCCTTTTGCGGAACA
TCTCAATCATGTTAAACTCGCTTTGGAAGATCAAGGTTATAAAGTTAACATACCGAATTCAGATTTGCCGTATCTATTGG
TAAACGATTTAGTGGTCGTGGCTGATAATATCGAAACAGATTACGGGCAAATTTATAATGTAAGCGCTCCGCTGGATTAT
ATTCCGTTTGATGAAGTATTGAAAATAGGAAGATGCGTCCGTCATCATGTTAAAGTAAATCGCGTGATTGTTCTTGGAGG
AGAAAACGTAACACCTGAACACTTGCAGAGATCGGTTGAAAGAAGAGAAGACGGATTAATAGGGGTGAATTCGCCTAAAT
CTAACGTATACAAGCAAGGATATCAAGTTCGTCACTTAGGATTTGGTATCTCTCCCGAAAATCAGTTGCCGACATTGGCG
AGAAATAGGGGAATGGAAGTCTCTCTTATCGGAAAAATGCAGGACATCATTTATTGTGAAGGTGCAAATAGATTTCCAGG
TGTAGATACAGAACAAGTCATGAAGGATATTATTCAGGAGATGGACCGCGTCAAAAAAGGCTTGATTGCTGCCACAGTAC
AAGAAACCGATTTGGCCGGACATGCACAGAATCCCGTCCGTTATGCGAATCGGATTGAAATGGTAGATCGATATTTGCCG
GAAATTCTCCGGAAAATGACAGATCAGGATCTGCTGATGATTAGTGCAGATCACGGGAATGATCCCACGATCGGCCACAA
CCAACACACACGGGAAAAAACATATTTGCTGGCTTATCACAAAAAATTATCGCCTGTTCACATCGGGGAAAGAAAAACGC
TATCCGACATTGCTGCAACTTCTGCTGATTATCTAGGGCTTCGCAATACTGAAAACGGCAGTTCATTCCTTCATTTAATG
CAAAAAGGAAAAGAGGAGACATACTGA

Upstream 100 bases:

>100_bases
TTAAGAAGCGGTCCTGAGACCATTTTAAGAATTCTAAACACATCCGTTCATCGAGCAACAGAAGATCTCAGCGTAAATTC
TTCAAAAGGCGATGATATAA

Downstream 100 bases:

>100_bases
TGTTTTTGGAATCTACATTAAAATATAACAAAAAATTAATAGAGGCTGCATTGAGTTTTCATCAGCAGGGAATCATTTCA
CCTAACACTTATGTATTAGA

Product: putative mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MNKRVIIIILDSLGVGYMEDASDYHPSDVGANTFYHILDTVPSLNIPNLEKLGINKILHHPKLKKTDHIASYGVLNLMHQ
GADSFEGHNEIMGTKPKKTYLAPFAEHLNHVKLALEDQGYKVNIPNSDLPYLLVNDLVVVADNIETDYGQIYNVSAPLDY
IPFDEVLKIGRCVRHHVKVNRVIVLGGENVTPEHLQRSVERREDGLIGVNSPKSNVYKQGYQVRHLGFGISPENQLPTLA
RNRGMEVSLIGKMQDIIYCEGANRFPGVDTEQVMKDIIQEMDRVKKGLIAATVQETDLAGHAQNPVRYANRIEMVDRYLP
EILRKMTDQDLLMISADHGNDPTIGHNQHTREKTYLLAYHKKLSPVHIGERKTLSDIAATSADYLGLRNTENGSSFLHLM
QKGKEETY

Sequences:

>Translated_408_residues
MNKRVIIIILDSLGVGYMEDASDYHPSDVGANTFYHILDTVPSLNIPNLEKLGINKILHHPKLKKTDHIASYGVLNLMHQ
GADSFEGHNEIMGTKPKKTYLAPFAEHLNHVKLALEDQGYKVNIPNSDLPYLLVNDLVVVADNIETDYGQIYNVSAPLDY
IPFDEVLKIGRCVRHHVKVNRVIVLGGENVTPEHLQRSVERREDGLIGVNSPKSNVYKQGYQVRHLGFGISPENQLPTLA
RNRGMEVSLIGKMQDIIYCEGANRFPGVDTEQVMKDIIQEMDRVKKGLIAATVQETDLAGHAQNPVRYANRIEMVDRYLP
EILRKMTDQDLLMISADHGNDPTIGHNQHTREKTYLLAYHKKLSPVHIGERKTLSDIAATSADYLGLRNTENGSSFLHLM
QKGKEETY
>Mature_408_residues
MNKRVIIIILDSLGVGYMEDASDYHPSDVGANTFYHILDTVPSLNIPNLEKLGINKILHHPKLKKTDHIASYGVLNLMHQ
GADSFEGHNEIMGTKPKKTYLAPFAEHLNHVKLALEDQGYKVNIPNSDLPYLLVNDLVVVADNIETDYGQIYNVSAPLDY
IPFDEVLKIGRCVRHHVKVNRVIVLGGENVTPEHLQRSVERREDGLIGVNSPKSNVYKQGYQVRHLGFGISPENQLPTLA
RNRGMEVSLIGKMQDIIYCEGANRFPGVDTEQVMKDIIQEMDRVKKGLIAATVQETDLAGHAQNPVRYANRIEMVDRYLP
EILRKMTDQDLLMISADHGNDPTIGHNQHTREKTYLLAYHKKLSPVHIGERKTLSDIAATSADYLGLRNTENGSSFLHLM
QKGKEETY

Specific function: Unknown

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1789781, Length=397, Percent_Identity=40.0503778337531, Blast_Score=319, Evalue=3e-88,
Organism=Escherichia coli, GI1790843, Length=428, Percent_Identity=27.3364485981308, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: NA

Molecular weight: Translated: 45929; Mature: 45929

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRVIIIILDSLGVGYMEDASDYHPSDVGANTFYHILDTVPSLNIPNLEKLGINKILHH
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PKLKKTDHIASYGVLNLMHQGADSFEGHNEIMGTKPKKTYLAPFAEHLNHVKLALEDQGY
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCEEEEEECCCE
KVNIPNSDLPYLLVNDLVVVADNIETDYGQIYNVSAPLDYIPFDEVLKIGRCVRHHVKVN
EEECCCCCCCEEEECCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEE
RVIVLGGENVTPEHLQRSVERREDGLIGVNSPKSNVYKQGYQVRHLGFGISPENQLPTLA
EEEEECCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCHHH
RNRGMEVSLIGKMQDIIYCEGANRFPGVDTEQVMKDIIQEMDRVKKGLIAATVQETDLAG
HCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
HAQNPVRYANRIEMVDRYLPEILRKMTDQDLLMISADHGNDPTIGHNQHTREKTYLLAYH
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHEEEEEEC
KKLSPVHIGERKTLSDIAATSADYLGLRNTENGSSFLHLMQKGKEETY
CCCCCEECCCCHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNKRVIIIILDSLGVGYMEDASDYHPSDVGANTFYHILDTVPSLNIPNLEKLGINKILHH
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PKLKKTDHIASYGVLNLMHQGADSFEGHNEIMGTKPKKTYLAPFAEHLNHVKLALEDQGY
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCEEEEEECCCE
KVNIPNSDLPYLLVNDLVVVADNIETDYGQIYNVSAPLDYIPFDEVLKIGRCVRHHVKVN
EEECCCCCCCEEEECCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEE
RVIVLGGENVTPEHLQRSVERREDGLIGVNSPKSNVYKQGYQVRHLGFGISPENQLPTLA
EEEEECCCCCCHHHHHHHHHHHHCCEEECCCCHHHHHHCCCEEEEEECCCCCCCCCCHHH
RNRGMEVSLIGKMQDIIYCEGANRFPGVDTEQVMKDIIQEMDRVKKGLIAATVQETDLAG
HCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
HAQNPVRYANRIEMVDRYLPEILRKMTDQDLLMISADHGNDPTIGHNQHTREKTYLLAYH
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHEEEEEEC
KKLSPVHIGERKTLSDIAATSADYLGLRNTENGSSFLHLMQKGKEETY
CCCCCEECCCCHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]