Click here to switch to the map view.

The map label for this gene is pcrB

Identifier: 52784514

GI number: 52784514

Start: 717207

End: 717893

Strand: Direct

Name: pcrB

Synonym: BLi00714

Alternate gene names: 52784514

Gene position: 717207-717893 (Clockwise)

Preceding gene: 52784513

Following gene: 52784515

Centisome position: 16.98

GC content: 49.49

Gene sequence:

>687_bases
ATGTACGATATTACCGAGTGGAAGCACGTCTTTAAACTCGATCCGAATAAAGATATTACGGATGATCAGCTTGAACAGCT
GTGCGAATCCGGAACAGACGCGGTTTTGATCGGCGGAAGCGACCATGTCACAGAAGATGACGTCCTTCGGCTGATGTCAA
AGGTGCGCCGCTTTTTAGTGCCGTGCGTTCTTGAAGTATCGACGATCGATGCGATCGTCCCGGGGTTTGACCTCTATTTT
ATTCCGACTGTGCTCAACAGCAGGGATACAGACTGGATTGCCGGCTTACATAAAAAGGCGATGAAAGAATACGGCGAGCT
GATGTCGCCGGAAGAGATTGTTGTTGAAGGGTACTGTATTTTGAATCAGGACTGCAAGGCTGCCGCTTTGACGAACGCAG
ATACCGAGCTTGACATTGAGGATATTAAAGCGTACGCCCGCGTAGCTGAACATCTTTTCCGCCTTCCGGTCTTTTATCTT
GAATACAGCGGCATGCTGGGTGATTCAGAGACCGTTAAGGAAACGAAAGCCGTGCTTCAGGAAACGACGCTGTTTTACGG
CGGCGGCATCAAAGATGCGGAGACGGCGGTTAAAATGGCTGAACACGCCGATGTGATCGTAGTCGGAAACGCGATTTATG
AGAACTTCGAAGAAGCGCTGAAAACGGTACAGGCCGTAAAAGGATGA

Upstream 100 bases:

>100_bases
GCTTCTGCCCGTTTATCGTTTATTTGTTATCCGTTTTTCGAAAGGGGCTGAATTTGTTATAATATTTAAATGGTAAGAAC
GCGAATGGAGGAGCTTTTTC

Downstream 100 bases:

>100_bases
GCACAACGAACCGGATTGGTTTATAATAGAACATATGTTTGAATAGGCGGTGAACGGAATTGAATTACATTAGCGACCAA
TTATTAAGCGGATTGAACAA

Product: geranylgeranylglyceryl phosphate synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MYDITEWKHVFKLDPNKDITDDQLEQLCESGTDAVLIGGSDHVTEDDVLRLMSKVRRFLVPCVLEVSTIDAIVPGFDLYF
IPTVLNSRDTDWIAGLHKKAMKEYGELMSPEEIVVEGYCILNQDCKAAALTNADTELDIEDIKAYARVAEHLFRLPVFYL
EYSGMLGDSETVKETKAVLQETTLFYGGGIKDAETAVKMAEHADVIVVGNAIYENFEEALKTVQAVKG

Sequences:

>Translated_228_residues
MYDITEWKHVFKLDPNKDITDDQLEQLCESGTDAVLIGGSDHVTEDDVLRLMSKVRRFLVPCVLEVSTIDAIVPGFDLYF
IPTVLNSRDTDWIAGLHKKAMKEYGELMSPEEIVVEGYCILNQDCKAAALTNADTELDIEDIKAYARVAEHLFRLPVFYL
EYSGMLGDSETVKETKAVLQETTLFYGGGIKDAETAVKMAEHADVIVVGNAIYENFEEALKTVQAVKG
>Mature_228_residues
MYDITEWKHVFKLDPNKDITDDQLEQLCESGTDAVLIGGSDHVTEDDVLRLMSKVRRFLVPCVLEVSTIDAIVPGFDLYF
IPTVLNSRDTDWIAGLHKKAMKEYGELMSPEEIVVEGYCILNQDCKAAALTNADTELDIEDIKAYARVAEHLFRLPVFYL
EYSGMLGDSETVKETKAVLQETTLFYGGGIKDAETAVKMAEHADVIVVGNAIYENFEEALKTVQAVKG

Specific function: Probable prenyltransferase that may catalyze the transfer of a prenyl moiety to sn-glycerol-1-phosphate (G1P)

COG id: COG1646

COG function: function code R; Predicted phosphate-binding enzymes, TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GGGP synthase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCRB_BACLD (Q65MR4)

Other databases:

- EMBL:   AE017333
- EMBL:   CP000002
- RefSeq:   YP_077938.1
- RefSeq:   YP_090343.1
- ProteinModelPortal:   Q65MR4
- SMR:   Q65MR4
- STRING:   Q65MR4
- EnsemblBacteria:   EBBACT00000054958
- EnsemblBacteria:   EBBACT00000061975
- GeneID:   3031237
- GeneID:   3097727
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi00714
- KEGG:   bli:BL00587
- NMPDR:   fig|279010.5.peg.1021
- eggNOG:   COG1646
- GeneTree:   EBGT00050000002481
- HOGENOM:   HBG313841
- OMA:   TGAHKEW
- ProtClustDB:   PRK04169
- BioCyc:   BLIC279010-1:BLI00714-MONOMER
- BioCyc:   BLIC279010:BL00587-MONOMER
- HAMAP:   MF_00112
- InterPro:   IPR008205
- Gene3D:   G3DSA:3.20.20.390
- TIGRFAMs:   TIGR01768

Pfam domain/function: PF01884 PcrB

EC number: NA

Molecular weight: Translated: 25449; Mature: 25449

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: BINDING 12-12 BINDING 164-164 BINDING 189-189 BINDING 210-210

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDITEWKHVFKLDPNKDITDDQLEQLCESGTDAVLIGGSDHVTEDDVLRLMSKVRRFLV
CCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
PCVLEVSTIDAIVPGFDLYFIPTVLNSRDTDWIAGLHKKAMKEYGELMSPEEIVVEGYCI
HHHHHHHHHHHHCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEECEEE
LNQDCKAAALTNADTELDIEDIKAYARVAEHLFRLPVFYLEYSGMLGDSETVKETKAVLQ
ECCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ETTLFYGGGIKDAETAVKMAEHADVIVVGNAIYENFEEALKTVQAVKG
HHHHHCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYDITEWKHVFKLDPNKDITDDQLEQLCESGTDAVLIGGSDHVTEDDVLRLMSKVRRFLV
CCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
PCVLEVSTIDAIVPGFDLYFIPTVLNSRDTDWIAGLHKKAMKEYGELMSPEEIVVEGYCI
HHHHHHHHHHHHCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEECEEE
LNQDCKAAALTNADTELDIEDIKAYARVAEHLFRLPVFYLEYSGMLGDSETVKETKAVLQ
ECCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ETTLFYGGGIKDAETAVKMAEHADVIVVGNAIYENFEEALKTVQAVKG
HHHHHCCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA