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The map label for this gene is yerC [H]

Identifier: 52784513

GI number: 52784513

Start: 716745

End: 717056

Strand: Direct

Name: yerC [H]

Synonym: BLi00713

Alternate gene names: 52784513

Gene position: 716745-717056 (Clockwise)

Preceding gene: 52784512

Following gene: 52784514

Centisome position: 16.97

GC content: 45.51

Gene sequence:

>312_bases
ATGCAGATCGATAAATTGCGCGGGAGAGAGCTGGACCAGCTTTTTCAATCCATACTATCACTAAAAGATCTCGAAGAATG
CTATCGTTTTTTCGATGATTTATGCACAATAAATGAAATTCAATCATTGGCTCAGCGGCTCGAAGTAGCCAGAATGCTGC
GCGACGGCAACACGTATCATAAAATTGAGACGGAAACCGGAGCGAGCACCGCGACCATTTCCAGGGTAAAGCGCTGCCTG
AACTACGGAAATGACGCTTATATCATGGCGCTGGACCGCGTCAAAGCAAATCAATCTGAATCATCTTCATGA

Upstream 100 bases:

>100_bases
CGGACGGCAAAACCGTTCCGTTCGTGCCGGGAAAAACGTGGATCAATATCGTTCCCGATCTCAGCAAGGTTTCTATTAGC
AAAGGAGAAGGTGTGTAAAG

Downstream 100 bases:

>100_bases
TGTCATGAAACCGCCTGGCTCAGGGCACTGAGCACCGGCGGTTTTTTTGTGCTTCTGCCCGTTTATCGTTTATTTGTTAT
CCGTTTTTCGAAAGGGGCTG

Product: YerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQIDKLRGRELDQLFQSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVARMLRDGNTYHKIETETGASTATISRVKRCL
NYGNDAYIMALDRVKANQSESSS

Sequences:

>Translated_103_residues
MQIDKLRGRELDQLFQSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVARMLRDGNTYHKIETETGASTATISRVKRCL
NYGNDAYIMALDRVKANQSESSS
>Mature_103_residues
MQIDKLRGRELDQLFQSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVARMLRDGNTYHKIETETGASTATISRVKRCL
NYGNDAYIMALDRVKANQSESSS

Specific function: Unknown

COG id: COG4496

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000831
- InterPro:   IPR010921
- InterPro:   IPR013368 [H]

Pfam domain/function: PF01371 Trp_repressor [H]

EC number: NA

Molecular weight: Translated: 11856; Mature: 11856

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDKLRGRELDQLFQSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVARMLRDGNTYH
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCE
KIETETGASTATISRVKRCLNYGNDAYIMALDRVKANQSESSS
EEECCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MQIDKLRGRELDQLFQSILSLKDLEECYRFFDDLCTINEIQSLAQRLEVARMLRDGNTYH
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCE
KIETETGASTATISRVKRCLNYGNDAYIMALDRVKANQSESSS
EEECCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]