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The map label for this gene is yerB [H]

Identifier: 52784512

GI number: 52784512

Start: 715753

End: 716742

Strand: Direct

Name: yerB [H]

Synonym: BLi00712

Alternate gene names: 52784512

Gene position: 715753-716742 (Clockwise)

Preceding gene: 52784511

Following gene: 52784513

Centisome position: 16.95

GC content: 48.48

Gene sequence:

>990_bases
ATGGTGAATCGATATGTAAGAGTACTGCTTTGTTTTGCTTCGCTTTTACTGCTTGCATCGTGCCAGTCGCAGGAACAGCA
GGAAAAGGAAAAGAACATTCATCCGCTGACAGGGTTGAAGGCGGACGGAGATATTCGGCAGCGGCCCATTGCCGTTGTGG
TGAACAATCATTCAAAAGCAAGGCCGCAGTCGGGATTAAGCAAGGCTGACATTGTCATTGAAGCTCTCAGTGAAGGACCG
ATCACACGATTGTTGGCGATCTATCAAAGCGATATGCCTGAAGCGGTTGGCCCAGTCCGCAGCGCCCGGGAGTATTTCAT
TGATTTGGCTCTCGGTTTTGACAGCATCCTTGTGCATCACGGCTGGAGTCCGGGGGCAAAAGACCGCCTGTTGAACGGCG
ACGCCGATCATATCAATGGAATGGATCACGACGGGACCCTGTTTTGGAGAGCCGATTTTCGGGAAGCGCCGCATAATTCG
TACACATCATACAAAAACGTAAAGCAAGCAGCAGATGACAAAGGATATGCCATCGAAACCCGCACAGAACCGCTCACTTT
TAAAGCAAGCCCTGATAAACCTTCGGATGCGCTTTATTCTATACGGTTAGATTATGGAACAAAATCCGTTACAAACCGTG
TCGAATATGGTTATGATAAAAAGGTTGAAGGCTATGTGAGAAAGTCAGACGGCGTTTTGACAACAGACCTTGAAACAGAA
GAACCGGTTGTTCTTCAAAACATTCTAATAGCGGAAGCCGAACATCATATGAAAGATGCGTACGGGAGAAGGGATATTGA
CCTTCGTTCAGGCGGAAAAGGACTCCTTCTGCAAAACGGGGAAGTCCATCGGATCAGCTGGAAGAACGAAAACGGCCGGA
TCATACCGACGGCGGACGGCAAAACCGTTCCGTTCGTGCCGGGAAAAACGTGGATCAATATCGTTCCCGATCTCAGCAAG
GTTTCTATTAGCAAAGGAGAAGGTGTGTAA

Upstream 100 bases:

>100_bases
TATATCAGGGTGACGCCGAAAGGGATCTTTGATGTGATGAAAAAAACTGTACTCTTTCCATCGATAATGCGTTAAAATAT
AAAAGAGCGGGAGCTAATCT

Downstream 100 bases:

>100_bases
AGATGCAGATCGATAAATTGCGCGGGAGAGAGCTGGACCAGCTTTTTCAATCCATACTATCACTAAAAGATCTCGAAGAA
TGCTATCGTTTTTTCGATGA

Product: YerB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MVNRYVRVLLCFASLLLLASCQSQEQQEKEKNIHPLTGLKADGDIRQRPIAVVVNNHSKARPQSGLSKADIVIEALSEGP
ITRLLAIYQSDMPEAVGPVRSAREYFIDLALGFDSILVHHGWSPGAKDRLLNGDADHINGMDHDGTLFWRADFREAPHNS
YTSYKNVKQAADDKGYAIETRTEPLTFKASPDKPSDALYSIRLDYGTKSVTNRVEYGYDKKVEGYVRKSDGVLTTDLETE
EPVVLQNILIAEAEHHMKDAYGRRDIDLRSGGKGLLLQNGEVHRISWKNENGRIIPTADGKTVPFVPGKTWINIVPDLSK
VSISKGEGV

Sequences:

>Translated_329_residues
MVNRYVRVLLCFASLLLLASCQSQEQQEKEKNIHPLTGLKADGDIRQRPIAVVVNNHSKARPQSGLSKADIVIEALSEGP
ITRLLAIYQSDMPEAVGPVRSAREYFIDLALGFDSILVHHGWSPGAKDRLLNGDADHINGMDHDGTLFWRADFREAPHNS
YTSYKNVKQAADDKGYAIETRTEPLTFKASPDKPSDALYSIRLDYGTKSVTNRVEYGYDKKVEGYVRKSDGVLTTDLETE
EPVVLQNILIAEAEHHMKDAYGRRDIDLRSGGKGLLLQNGEVHRISWKNENGRIIPTADGKTVPFVPGKTWINIVPDLSK
VSISKGEGV
>Mature_329_residues
MVNRYVRVLLCFASLLLLASCQSQEQQEKEKNIHPLTGLKADGDIRQRPIAVVVNNHSKARPQSGLSKADIVIEALSEGP
ITRLLAIYQSDMPEAVGPVRSAREYFIDLALGFDSILVHHGWSPGAKDRLLNGDADHINGMDHDGTLFWRADFREAPHNS
YTSYKNVKQAADDKGYAIETRTEPLTFKASPDKPSDALYSIRLDYGTKSVTNRVEYGYDKKVEGYVRKSDGVLTTDLETE
EPVVLQNILIAEAEHHMKDAYGRRDIDLRSGGKGLLLQNGEVHRISWKNENGRIIPTADGKTVPFVPGKTWINIVPDLSK
VSISKGEGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021416
- InterPro:   IPR023158 [H]

Pfam domain/function: PF11258 DUF3048 [H]

EC number: NA

Molecular weight: Translated: 36549; Mature: 36549

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRYVRVLLCFASLLLLASCQSQEQQEKEKNIHPLTGLKADGDIRQRPIAVVVNNHSKA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RPQSGLSKADIVIEALSEGPITRLLAIYQSDMPEAVGPVRSAREYFIDLALGFDSILVHH
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEC
GWSPGAKDRLLNGDADHINGMDHDGTLFWRADFREAPHNSYTSYKNVKQAADDKGYAIET
CCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEE
RTEPLTFKASPDKPSDALYSIRLDYGTKSVTNRVEYGYDKKVEGYVRKSDGVLTTDLETE
CCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCC
EPVVLQNILIAEAEHHMKDAYGRRDIDLRSGGKGLLLQNGEVHRISWKNENGRIIPTADG
CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCEEEEEEECCCCEEEECCCC
KTVPFVPGKTWINIVPDLSKVSISKGEGV
CEECCCCCCCEEEECCCCHHEECCCCCCC
>Mature Secondary Structure
MVNRYVRVLLCFASLLLLASCQSQEQQEKEKNIHPLTGLKADGDIRQRPIAVVVNNHSKA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RPQSGLSKADIVIEALSEGPITRLLAIYQSDMPEAVGPVRSAREYFIDLALGFDSILVHH
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEC
GWSPGAKDRLLNGDADHINGMDHDGTLFWRADFREAPHNSYTSYKNVKQAADDKGYAIET
CCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEE
RTEPLTFKASPDKPSDALYSIRLDYGTKSVTNRVEYGYDKKVEGYVRKSDGVLTTDLETE
CCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCC
EPVVLQNILIAEAEHHMKDAYGRRDIDLRSGGKGLLLQNGEVHRISWKNENGRIIPTADG
CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCCEEEEEEECCCCEEEECCCC
KTVPFVPGKTWINIVPDLSKVSISKGEGV
CEECCCCCCCEEEECCCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]