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The map label for this gene is ycsE [H]

Identifier: 52784317

GI number: 52784317

Start: 503480

End: 504235

Strand: Direct

Name: ycsE [H]

Synonym: BLi00497

Alternate gene names: 52784317

Gene position: 503480-504235 (Clockwise)

Preceding gene: 52784316

Following gene: 52784318

Centisome position: 11.92

GC content: 48.68

Gene sequence:

>756_bases
GTGTCAGTCAGTCAAAGAAATCGAATCGATGTGAAGCTAGTAGCTCTGGATATGGATGGAACACTGTTAAATGACGAACA
AACCATTTCTGATGAAAACAGAAAAGCGATTAAAGAAGCTGAGGAAAAAGGGGTTTATGTCGTGCTTAGCACCGGGCGGA
CGCTGATGACGTGCCGGGAGTTGGCGGAGTCGCTCGAACTGTCTTCTTTTTTGATCACGGCAAACGGCAGTGAAATCTGG
GATTCGTCTTTCAACCTGGTCGAGCGCCAGCTGCTTCATCCCGATCATGTCCAAATGATGTGGGATTTGCGCAATCTGCA
CAACACCGATTTCTGGGCCGCCAGTGTCGATAAAGTGTGGAGAGGCGAGTTTCCTGAGGATATACAAGCGTATGAATGGC
TGAAATTCGGCTTTGATATTCCGGATGACGACGTCAGAAACCGGGTCCTGGAAGAGCTGAAAAAGAACAAAGAATTGGAA
GTCACCAATTCAAGCCCGACCAATATTGAAGTCAATGCCATCGGGATCAATAAAGCGGCCGCTTTGGCAAAAGTGTGCGA
GCGCCTCGGCTTTACGATGGAACATGTGATGGCGGTCGGAGACAGTTTAAATGATATCGCCATGATCAAAGAAGCCGGTT
TAGGCGTTGCCATGGGGAACGCCCAGGAAATCGTCAAAGAAACCGCGGACTGGATTACAGATTCCAATATCGAACACGGA
GTCGCAAAGGCGATCAGGCATTGGGTATTGTCCTAG

Upstream 100 bases:

>100_bases
CACTGGCGGCGGAACAGCTCGTTTAAGATTTCTTTGTCCTGGCCGATTTTTATATTAGAATAGATAAAAGCCTAAAAAAA
GTGGAGGTATCTTAAATATC

Downstream 100 bases:

>100_bases
CCGAAAAAAGAGCCGATTTGCGGCTCTTTTTTTTGTGCAAAATAAAAAATATTCATGGACTGAAGCAAGCTGAAAAACCT
TGTGAAATCAGGTTTTTCAG

Product: YcsE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSVSQRNRIDVKLVALDMDGTLLNDEQTISDENRKAIKEAEEKGVYVVLSTGRTLMTCRELAESLELSSFLITANGSEIW
DSSFNLVERQLLHPDHVQMMWDLRNLHNTDFWAASVDKVWRGEFPEDIQAYEWLKFGFDIPDDDVRNRVLEELKKNKELE
VTNSSPTNIEVNAIGINKAAALAKVCERLGFTMEHVMAVGDSLNDIAMIKEAGLGVAMGNAQEIVKETADWITDSNIEHG
VAKAIRHWVLS

Sequences:

>Translated_251_residues
MSVSQRNRIDVKLVALDMDGTLLNDEQTISDENRKAIKEAEEKGVYVVLSTGRTLMTCRELAESLELSSFLITANGSEIW
DSSFNLVERQLLHPDHVQMMWDLRNLHNTDFWAASVDKVWRGEFPEDIQAYEWLKFGFDIPDDDVRNRVLEELKKNKELE
VTNSSPTNIEVNAIGINKAAALAKVCERLGFTMEHVMAVGDSLNDIAMIKEAGLGVAMGNAQEIVKETADWITDSNIEHG
VAKAIRHWVLS
>Mature_250_residues
SVSQRNRIDVKLVALDMDGTLLNDEQTISDENRKAIKEAEEKGVYVVLSTGRTLMTCRELAESLELSSFLITANGSEIWD
SSFNLVERQLLHPDHVQMMWDLRNLHNTDFWAASVDKVWRGEFPEDIQAYEWLKFGFDIPDDDVRNRVLEELKKNKELEV
TNSSPTNIEVNAIGINKAAALAKVCERLGFTMEHVMAVGDSLNDIAMIKEAGLGVAMGNAQEIVKETADWITDSNIEHGV
AKAIRHWVLS

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=272, Percent_Identity=32.3529411764706, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI87081741, Length=266, Percent_Identity=26.6917293233083, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786982, Length=271, Percent_Identity=27.3062730627306, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787043, Length=261, Percent_Identity=24.1379310344828, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI87081790, Length=260, Percent_Identity=24.6153846153846, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28274; Mature: 28143

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSQRNRIDVKLVALDMDGTLLNDEQTISDENRKAIKEAEEKGVYVVLSTGRTLMTCRE
CCCCCCCCCEEEEEEEECCCCEECCCHHCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LAESLELSSFLITANGSEIWDSSFNLVERQLLHPDHVQMMWDLRNLHNTDFWAASVDKVW
HHHHHCHHHEEEECCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
RGEFPEDIQAYEWLKFGFDIPDDDVRNRVLEELKKNKELEVTNSSPTNIEVNAIGINKAA
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCHHH
ALAKVCERLGFTMEHVMAVGDSLNDIAMIKEAGLGVAMGNAQEIVKETADWITDSNIEHG
HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCHHH
VAKAIRHWVLS
HHHHHHHHHCC
>Mature Secondary Structure 
SVSQRNRIDVKLVALDMDGTLLNDEQTISDENRKAIKEAEEKGVYVVLSTGRTLMTCRE
CCCCCCCCEEEEEEEECCCCEECCCHHCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LAESLELSSFLITANGSEIWDSSFNLVERQLLHPDHVQMMWDLRNLHNTDFWAASVDKVW
HHHHHCHHHEEEECCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
RGEFPEDIQAYEWLKFGFDIPDDDVRNRVLEELKKNKELEVTNSSPTNIEVNAIGINKAA
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCHHH
ALAKVCERLGFTMEHVMAVGDSLNDIAMIKEAGLGVAMGNAQEIVKETADWITDSNIEHG
HHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCCHHH
VAKAIRHWVLS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]