| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is nasB [H]
Identifier: 52784302
GI number: 52784302
Start: 485200
End: 487494
Strand: Direct
Name: nasB [H]
Synonym: BLi00482
Alternate gene names: 52784302
Gene position: 485200-487494 (Clockwise)
Preceding gene: 52784298
Following gene: 52784303
Centisome position: 11.49
GC content: 51.72
Gene sequence:
>2295_bases ATGGGGAAACAAAGGCTTGTTTTAATAGGAAACGGCATGGCAGGGGTTCGCACGGCCGAAGAGATTTCACTACACGGCGG GAGCCGGTTTGAGATCGTCATCATCGGCAGCGAACCACACCCGGGCTATAACCGGATTCTGCTGTCTTCTGTCCTTCAGG GAGAAACGGATTGGAACGATGTGATGACAAAAAGCCGGAGCTGGTATGAAGAAAACGGGATTACCCTTTATACAGGGGAA ACGGCTGTCGCAATCGATACGGTTAATCAAACGGTGGCGACAGATCAAAACCGCGAAATCGCTTATGACAAACTGATCAT TGCGACGGGCTCTTCCCCGTTTATCCTCCCGGTTCATGGTGCAGACAAAGAAGGGGTATATGGTTTTAGAACAATAGACG ATTGCCGGGCATTCATAAACGCATCAAAGCGATTTAAAAAAGCGGCCGTCATCGGCGGGGGAATATTGGGCCTTGAGGCG GCGCGGGGATTGGCAAACCTCGGGATGAAGGTTGATGTGGTTCACCACTCTTCCTCCATCATGCAGACTCAGCTTGATCC GCCGGCTTCTGCCATGCTCCAGAAAGAGCTGGAGCGTCAAGGGATCCATTTTCTTTTGGAGAAAGATACAGAGGCGATTT TAGGAACATCGCGCGCCGAGGGTGTGCGGTTTAAAGACGGGACGAAGATCAGCGCCGATCTCGTCGTCATGGCTGCCGGT GTCAGACCGAATATCGAACTGGCCAAGGCGAGCGGTATTTCAACCAACAGGGCGATCATCGTCAGCGACTATATGGAGAC AAATGTTCCAAATGTCTACGCCGTCGGTGAATGCGCGGAGCATAACGGAACGGTCTACGGCTTAGTCAAGCCACTGTATG AGCAGGGGAAAGTGCTGGCCAAACATATTTGCGGCCTCGAATGTTCCGGTTATCAGGGCTCCGTTCAGTCCGCGGCTTTA AAAATGTCCGGAATCGACGTCTTTTCGGCAGGGAAAATCACAGAGGACGACTCGACGACGGCTATTAAACTTTTAGACGA AGCGGCCGGAGTCTATAAAAAAGCGGTCTTTCAAGGGGATAAAATGGCCGGCGTCATTTTATACGGAGACACCAGCGGCA GCCAAAGGCTGTTGGAAAGCATCATCAAACAAAGGGATATTACCGTTGTCAAAAAAGAGCTGTTTCAATCGGAGGAAGAC AGTTCAGTCGCTTCTATGGCGGTTCGTGAAACGATCTGCCAATGCAACGCGGTTTCAAAAGGCATGATCATGGAAGCGAT ACAGACGCACGGTTTAAAGACGGCCGAGGAGGTCAAACGCTGTACAAAAGCTTCCGGGTCATGCGGCGGCTGCAGGCCGT TGGTCGAGGAACTGCTCCTCCATACCGCCGAACATGATGGTCACATATCTGCGGCGGAACAACCGATGTGCGCCTGCACT TCATTCACGGAAGATGAAGTCGTGAACGAAATACAGATGAGAAATCTTTCTTCCGTTCACGAAGTCATCTCGGCGCTCGG CTGGAAAAATAGCAGCGGATGCCGGATTTGCGTGCCCGCGCTTCACTACTATTTAAAAATGATCCGTCCGGACATCGCCT ATGAGGAGCACGAAGAGGAGACGGATGCCATCATCCCGCAAATGTACGGAGGCCGGACGAATGCCGAAGAGCTGAAGCGC ATTGCAGGAGTGATTGAAAAATATCAAATTCAAGAGGTGTACATGACACACCATCAGAGATTAAAGCTTGCCGGCATCAA GCCGGAGCATATAGAGCGCGTGAAAGAAGAACTCGGCATGCCGTATTGCCTGCCGCAACAGCAGCGGATCGCCGCGGTTA AAACGTGCCCATGCGGATCACCGCAGATTCAAACATTGGCAGCAGACTTGGAAAAAGCAGCAGAATCCCTCCTCATTCCG GCCAAGGTCTCCATTGGGGTGTCGGGCTGTTTGGACGATTGCGTGTACGCTTCAGTTCATGACATCGGACTTCTCAAAGT AAACGGAGGATGGGAGATTTATGCGGGCGGCCAAGGAGGACAGCATGCTTCCCCGGGAGAGCTGCTTTCAGTAGCCGACT CGGCGGAGGAAGCGGGTGAACTCATGAAAGGCCTGCTTCAATATTACCGCGAAACAGCAAACTATCTTGAGAAGATCGGG CATTGGATTGAACGCGCCGGCATCATTCATATCCGGGAAGTTTTATTTGACAACGGACTTCGCGGCCAGCTGTTCGAACG GCTTGAAAAAGAAAAGCGGCTGGCTCAGCAAGAAATGATAAAAGGGCTGATGTGA
Upstream 100 bases:
>100_bases TTCTAAAATTTTTTGTCAGGAAATGTAACAGGTTTGCACGCTTTAGCGATGCAATGTGAAATAATAATCCGGAGCAAAGC TGCAGAGGGGAGGGGAGAAA
Downstream 100 bases:
>100_bases AATGACAGAACGATTGCTAAAGTACTTTCGCACAAAGCAAAAAGAAGTGCAATCCGAAAAAACGTATGACACCCAATGTC CATTTTGCAGCATGCAGTGC
Product: NasB
Products: nitrite; NADH; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MGKQRLVLIGNGMAGVRTAEEISLHGGSRFEIVIIGSEPHPGYNRILLSSVLQGETDWNDVMTKSRSWYEENGITLYTGE TAVAIDTVNQTVATDQNREIAYDKLIIATGSSPFILPVHGADKEGVYGFRTIDDCRAFINASKRFKKAAVIGGGILGLEA ARGLANLGMKVDVVHHSSSIMQTQLDPPASAMLQKELERQGIHFLLEKDTEAILGTSRAEGVRFKDGTKISADLVVMAAG VRPNIELAKASGISTNRAIIVSDYMETNVPNVYAVGECAEHNGTVYGLVKPLYEQGKVLAKHICGLECSGYQGSVQSAAL KMSGIDVFSAGKITEDDSTTAIKLLDEAAGVYKKAVFQGDKMAGVILYGDTSGSQRLLESIIKQRDITVVKKELFQSEED SSVASMAVRETICQCNAVSKGMIMEAIQTHGLKTAEEVKRCTKASGSCGGCRPLVEELLLHTAEHDGHISAAEQPMCACT SFTEDEVVNEIQMRNLSSVHEVISALGWKNSSGCRICVPALHYYLKMIRPDIAYEEHEEETDAIIPQMYGGRTNAEELKR IAGVIEKYQIQEVYMTHHQRLKLAGIKPEHIERVKEELGMPYCLPQQQRIAAVKTCPCGSPQIQTLAADLEKAAESLLIP AKVSIGVSGCLDDCVYASVHDIGLLKVNGGWEIYAGGQGGQHASPGELLSVADSAEEAGELMKGLLQYYRETANYLEKIG HWIERAGIIHIREVLFDNGLRGQLFERLEKEKRLAQQEMIKGLM
Sequences:
>Translated_764_residues MGKQRLVLIGNGMAGVRTAEEISLHGGSRFEIVIIGSEPHPGYNRILLSSVLQGETDWNDVMTKSRSWYEENGITLYTGE TAVAIDTVNQTVATDQNREIAYDKLIIATGSSPFILPVHGADKEGVYGFRTIDDCRAFINASKRFKKAAVIGGGILGLEA ARGLANLGMKVDVVHHSSSIMQTQLDPPASAMLQKELERQGIHFLLEKDTEAILGTSRAEGVRFKDGTKISADLVVMAAG VRPNIELAKASGISTNRAIIVSDYMETNVPNVYAVGECAEHNGTVYGLVKPLYEQGKVLAKHICGLECSGYQGSVQSAAL KMSGIDVFSAGKITEDDSTTAIKLLDEAAGVYKKAVFQGDKMAGVILYGDTSGSQRLLESIIKQRDITVVKKELFQSEED SSVASMAVRETICQCNAVSKGMIMEAIQTHGLKTAEEVKRCTKASGSCGGCRPLVEELLLHTAEHDGHISAAEQPMCACT SFTEDEVVNEIQMRNLSSVHEVISALGWKNSSGCRICVPALHYYLKMIRPDIAYEEHEEETDAIIPQMYGGRTNAEELKR IAGVIEKYQIQEVYMTHHQRLKLAGIKPEHIERVKEELGMPYCLPQQQRIAAVKTCPCGSPQIQTLAADLEKAAESLLIP AKVSIGVSGCLDDCVYASVHDIGLLKVNGGWEIYAGGQGGQHASPGELLSVADSAEEAGELMKGLLQYYRETANYLEKIG HWIERAGIIHIREVLFDNGLRGQLFERLEKEKRLAQQEMIKGLM >Mature_763_residues GKQRLVLIGNGMAGVRTAEEISLHGGSRFEIVIIGSEPHPGYNRILLSSVLQGETDWNDVMTKSRSWYEENGITLYTGET AVAIDTVNQTVATDQNREIAYDKLIIATGSSPFILPVHGADKEGVYGFRTIDDCRAFINASKRFKKAAVIGGGILGLEAA RGLANLGMKVDVVHHSSSIMQTQLDPPASAMLQKELERQGIHFLLEKDTEAILGTSRAEGVRFKDGTKISADLVVMAAGV RPNIELAKASGISTNRAIIVSDYMETNVPNVYAVGECAEHNGTVYGLVKPLYEQGKVLAKHICGLECSGYQGSVQSAALK MSGIDVFSAGKITEDDSTTAIKLLDEAAGVYKKAVFQGDKMAGVILYGDTSGSQRLLESIIKQRDITVVKKELFQSEEDS SVASMAVRETICQCNAVSKGMIMEAIQTHGLKTAEEVKRCTKASGSCGGCRPLVEELLLHTAEHDGHISAAEQPMCACTS FTEDEVVNEIQMRNLSSVHEVISALGWKNSSGCRICVPALHYYLKMIRPDIAYEEHEEETDAIIPQMYGGRTNAEELKRI AGVIEKYQIQEVYMTHHQRLKLAGIKPEHIERVKEELGMPYCLPQQQRIAAVKTCPCGSPQIQTLAADLEKAAESLLIPA KVSIGVSGCLDDCVYASVHDIGLLKVNGGWEIYAGGQGGQHASPGELLSVADSAEEAGELMKGLLQYYRETANYLEKIGH WIERAGIIHIREVLFDNGLRGQLFERLEKEKRLAQQEMIKGLM
Specific function: Required for nitrate assimilation [H]
COG id: COG1251
COG function: function code C; NAD(P)H-nitrite reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI65787454, Length=275, Percent_Identity=28, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI226437568, Length=275, Percent_Identity=28, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI21389617, Length=275, Percent_Identity=28, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI4757732, Length=287, Percent_Identity=27.8745644599303, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI22202629, Length=257, Percent_Identity=28.4046692607004, Blast_Score=84, Evalue=5e-16, Organism=Escherichia coli, GI1789765, Length=794, Percent_Identity=28.9672544080605, Blast_Score=307, Evalue=1e-84, Organism=Escherichia coli, GI1789065, Length=301, Percent_Identity=28.2392026578073, Blast_Score=141, Evalue=2e-34, Organism=Escherichia coli, GI1788892, Length=279, Percent_Identity=23.6559139784946, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1787352, Length=225, Percent_Identity=28.4444444444444, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17559934, Length=418, Percent_Identity=24.1626794258373, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI32564386, Length=362, Percent_Identity=24.8618784530387, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639257, Length=313, Percent_Identity=24.6006389776358, Blast_Score=107, Evalue=5e-23, Organism=Drosophila melanogaster, GI281359715, Length=313, Percent_Identity=24.6006389776358, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI281359713, Length=313, Percent_Identity=24.6006389776358, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI24639250, Length=313, Percent_Identity=24.6006389776358, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI18543267, Length=313, Percent_Identity=24.6006389776358, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI24639252, Length=313, Percent_Identity=24.6006389776358, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI24585130, Length=282, Percent_Identity=24.468085106383, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24581020, Length=265, Percent_Identity=23.3962264150943, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI28573993, Length=265, Percent_Identity=23.3962264150943, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007419 - InterPro: IPR013027 - InterPro: IPR005117 - InterPro: IPR012744 - InterPro: IPR017121 - InterPro: IPR006067 - InterPro: IPR001327 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.7.1.4
Molecular weight: Translated: 83277; Mature: 83146
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKQRLVLIGNGMAGVRTAEEISLHGGSRFEIVIIGSEPHPGYNRILLSSVLQGETDWND CCCCEEEEEECCCCCCCCHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHH VMTKSRSWYEENGITLYTGETAVAIDTVNQTVATDQNREIAYDKLIIATGSSPFILPVHG HHHHCCCHHHHCCEEEEECCEEEEEECCCHHHCCCCCCCEEEEEEEEEECCCCEEEEECC ADKEGVYGFRTIDDCRAFINASKRFKKAAVIGGGILGLEAARGLANLGMKVDVVHHSSSI CCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHH MQTQLDPPASAMLQKELERQGIHFLLEKDTEAILGTSRAEGVRFKDGTKISADLVVMAAG HHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCEECCCCEEEEEEEEEEEC VRPNIELAKASGISTNRAIIVSDYMETNVPNVYAVGECAEHNGTVYGLVKPLYEQGKVLA CCCCCEEEECCCCCCCCEEEEECHHHCCCCCEEEECCHHCCCCEEEEHHHHHHHHHHHHH KHICGLECSGYQGSVQSAALKMSGIDVFSAGKITEDDSTTAIKLLDEAAGVYKKAVFQGD HHHCCCCCCCCCCCHHHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KMAGVILYGDTSGSQRLLESIIKQRDITVVKKELFQSEEDSSVASMAVRETICQCNAVSK CEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCH GMIMEAIQTHGLKTAEEVKRCTKASGSCGGCRPLVEELLLHTAEHDGHISAAEQPMCACT HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHC SFTEDEVVNEIQMRNLSSVHEVISALGWKNSSGCRICVPALHYYLKMIRPDIAYEEHEEE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHCCCH TDAIIPQMYGGRTNAEELKRIAGVIEKYQIQEVYMTHHQRLKLAGIKPEHIERVKEELGM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCC PYCLPQQQRIAAVKTCPCGSPQIQTLAADLEKAAESLLIPAKVSIGVSGCLDDCVYASVH CCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHHHC DIGLLKVNGGWEIYAGGQGGQHASPGELLSVADSAEEAGELMKGLLQYYRETANYLEKIG CEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWIERAGIIHIREVLFDNGLRGQLFERLEKEKRLAQQEMIKGLM HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKQRLVLIGNGMAGVRTAEEISLHGGSRFEIVIIGSEPHPGYNRILLSSVLQGETDWND CCCEEEEEECCCCCCCCHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHH VMTKSRSWYEENGITLYTGETAVAIDTVNQTVATDQNREIAYDKLIIATGSSPFILPVHG HHHHCCCHHHHCCEEEEECCEEEEEECCCHHHCCCCCCCEEEEEEEEEECCCCEEEEECC ADKEGVYGFRTIDDCRAFINASKRFKKAAVIGGGILGLEAARGLANLGMKVDVVHHSSSI CCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCHH MQTQLDPPASAMLQKELERQGIHFLLEKDTEAILGTSRAEGVRFKDGTKISADLVVMAAG HHHCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCEECCCCEEEEEEEEEEEC VRPNIELAKASGISTNRAIIVSDYMETNVPNVYAVGECAEHNGTVYGLVKPLYEQGKVLA CCCCCEEEECCCCCCCCEEEEECHHHCCCCCEEEECCHHCCCCEEEEHHHHHHHHHHHHH KHICGLECSGYQGSVQSAALKMSGIDVFSAGKITEDDSTTAIKLLDEAAGVYKKAVFQGD HHHCCCCCCCCCCCHHHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KMAGVILYGDTSGSQRLLESIIKQRDITVVKKELFQSEEDSSVASMAVRETICQCNAVSK CEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCH GMIMEAIQTHGLKTAEEVKRCTKASGSCGGCRPLVEELLLHTAEHDGHISAAEQPMCACT HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHC SFTEDEVVNEIQMRNLSSVHEVISALGWKNSSGCRICVPALHYYLKMIRPDIAYEEHEEE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHCCCH TDAIIPQMYGGRTNAEELKRIAGVIEKYQIQEVYMTHHQRLKLAGIKPEHIERVKEELGM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCC PYCLPQQQRIAAVKTCPCGSPQIQTLAADLEKAAESLLIPAKVSIGVSGCLDDCVYASVH CCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHHHC DIGLLKVNGGWEIYAGGQGGQHASPGELLSVADSAEEAGELMKGLLQYYRETANYLEKIG CEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWIERAGIIHIREVLFDNGLRGQLFERLEKEKRLAQQEMIKGLM HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD; NAD+; NADH; Siroheme [C]
Metal ions: Iron [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.4 {NO2-}} 0.005 {NO2-}} 0.016 {NADH}} 5.3 {hydroxylamine}} [C]
Substrates: ammonium hydroxide; NAD+; NADP+; H2O
Specific reaction: ammonium hydroxide + 3 NAD(P)+ + H2O = nitrite + 3 NAD(P)H + 3 H+
General reaction: Redox reaction [C]
Inhibitor: 1, 10-Phenanthroline; 2, 2'-Bipyridine; Arsenite; CN-; NAD+; NADP+; NaN3; p-Chloromercuribenzoate; SO32- [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]