| Definition | Bacillus licheniformis ATCC 14580, complete genome. |
|---|---|
| Accession | NC_006322 |
| Length | 4,222,645 |
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The map label for this gene is endo I [H]
Identifier: 52784161
GI number: 52784161
Start: 314491
End: 316572
Strand: Direct
Name: endo I [H]
Synonym: BLi00339
Alternate gene names: 52784161
Gene position: 314491-316572 (Clockwise)
Preceding gene: 52784160
Following gene: 52784163
Centisome position: 7.45
GC content: 46.97
Gene sequence:
>2082_bases ATGAAGAAAGCCGCTTCATCTTTTTTATCTTGTATGCTGCTCCTCGCGCTTTTTATCCCGAACCGGCAGATTTCCGCAGA GACTTCAAGCGAAAGACCGGACTGCCGTCCGGAAGGGCTATGGGACTCGGGCGTTGAACATGTGCCGTATTGCGATGTAT ACGACAAGGACGGCCGTGAAAAGCTGGCCAATCAGTTAGACCGGAGAATCATCGGTTACTTTACGAGCTGGCGTACGGGA AAAGGAAATCAAGATCGTTATTTAGTAAGCGATATCCCCTGGAAGTACTTGAGCCACATTAATTATGCGTTTGCCCACAT CGGGGAAGATCATCGGATTTCAGTCGGAGAAGAGGCAGATGAGAACAACCCGTCCATCGGGATGACTTGGCCGGAGCATC CCGATGTAAAAATGGATCAAACCTTGCCGTATAAGGGGCATTTTAACCTTATCCATCAATATAAAGATAGATACCCGGAT GTGAAGGTTTTGGCCGCTGTCGGCGGTTGGGCCGAAACCGGCGGCTATGTCGACAAGGACGGAAAGCGAATTCCAAGCGG CGGCTTTTACTCGATGACAACGAATGGAGATGGATCTGTAAACCACAAGGGTATTCACACCTTTGCGGAATCGGTCGTTG CGTTTCTCAGAAAATATGAGATCGATGGAATCGATATTGACTATGAGTACCCTACATCGATGCAGGATGCAGGGAATCCG GCAGATTGGAACATCGCCAATCCGCGGCGCAACGGGTTAAATAAAAGCTTTGAGGCATTGATGAAAACATTAAGAGAAAA GCTTGATCAAGCGTCCGCTGAAGATGGAAAGTACTACATGCTGACCATTGCAGCACCATCCTCGGCATATTTACTGAGGG GGATGGAAACGTTTAAGCCGCTTCGATATGTCGATTATGTCAATATCATGTCCTACGATCTTCATGGAGCCTGGAATGAG TTTGTCGGACCGAACGCTTCTTTATTCGATAACGGCGAAGATGCCGAACTCAAGCAGTCCAACATTTATACTACGCCGGA ATACGAAGGGATCGGATATTTAAATACGGACTGGGCTTACCATTATTTTAGAGGGGCAGTAGAATCGGGACGAATCAATA TCGGTGTGCCTTATTATACGAGAGGCTGGAAAAATGTGACCGGCGGAGCAAATGGGCTGTGGGGAAGAGCCAAAAGCGCA GATTGCCCTCAGGGACTCAGGCAATGCGGTGACGGAGCAACCGGAATCGATAATATTTGGCACGATAAAGATGAGCAGGG GAATGAAATTGGAGCAGGGGCAAACCCGATGTGGCACGCCAAAAACCTTGAAAAGGGCATTGCTGGTTCTTATCTGGAAA GGTATGGATTGAGCAAGGCTGATTTGACAGGCGTTTATAAAAGGCATTATGACGCAGGGCTGGCAGCGCCTTGGCTTTGG AATCCAGAAAAGAAAGTATTTCTATCGACAGAGGATGAGGAATCGATCAAAACGAAGGCGGATTATGTCATTGATAAAGG AATCGGGGGTGTCATGTTTTGGGATTTGAGCGGTGATTATGACTGGTATCCCGAACGAAACGGCAGTAAAGGAGAATACG GTATCGGCAATACCTTAACGAGAACGATGTATCATAAATTCTCGGATACAACACCATACGATAATCGACTCAGCACATCA CCTTTGCCTGATGAATCACTAGATGCAGAAGTAGAGTTGACGAACTTTCCGTTAGGAGATCAAAATTACCCGATCCACCC GGTGATGAAGCTGATCAACAACAGCGATGTCACGATTACGGGAGGTTCTTTTATCGAATTTGATGCGCCGACATCCACTT CCCCTCGGTTTAGAAGCTGGAGCGGCGATCATGTTGAAGTGATTTCTAAAGGGCATACGGGACCGAACATTGGCGGACTG ACAGTAGATTTCCACCGCATCAGAGTGACTCTATCAATCTGGAAAACCATTAAACCTGGTGAGGAAGCGGAGTTTCAGCT TGTCTATTATTTGCCGATCAGCGGTCCTTCAAATTTCACGATATCAATAGATGGCAAAAAGTACAGGCTTAAAGGAAATT AA
Upstream 100 bases:
>100_bases CTGCGAATAAGAGAAAGTCAAATGGATAGAAAACGATAAAGAGAGATTTGGGGAACAGCTTCTCACGTCTCTCTTTATGG ACAAAGGAGTCTGAGTAAAC
Downstream 100 bases:
>100_bases GTATACGGCCGTTAGATGTGACAGCCCGTTCCAAAAGGAAGCGGGCTGTCTTCGTGTATTATTGTGCGCTGTTTTTCCAG TTGGTCAAATTGTCGAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MKKAASSFLSCMLLLALFIPNRQISAETSSERPDCRPEGLWDSGVEHVPYCDVYDKDGREKLANQLDRRIIGYFTSWRTG KGNQDRYLVSDIPWKYLSHINYAFAHIGEDHRISVGEEADENNPSIGMTWPEHPDVKMDQTLPYKGHFNLIHQYKDRYPD VKVLAAVGGWAETGGYVDKDGKRIPSGGFYSMTTNGDGSVNHKGIHTFAESVVAFLRKYEIDGIDIDYEYPTSMQDAGNP ADWNIANPRRNGLNKSFEALMKTLREKLDQASAEDGKYYMLTIAAPSSAYLLRGMETFKPLRYVDYVNIMSYDLHGAWNE FVGPNASLFDNGEDAELKQSNIYTTPEYEGIGYLNTDWAYHYFRGAVESGRINIGVPYYTRGWKNVTGGANGLWGRAKSA DCPQGLRQCGDGATGIDNIWHDKDEQGNEIGAGANPMWHAKNLEKGIAGSYLERYGLSKADLTGVYKRHYDAGLAAPWLW NPEKKVFLSTEDEESIKTKADYVIDKGIGGVMFWDLSGDYDWYPERNGSKGEYGIGNTLTRTMYHKFSDTTPYDNRLSTS PLPDESLDAEVELTNFPLGDQNYPIHPVMKLINNSDVTITGGSFIEFDAPTSTSPRFRSWSGDHVEVISKGHTGPNIGGL TVDFHRIRVTLSIWKTIKPGEEAEFQLVYYLPISGPSNFTISIDGKKYRLKGN
Sequences:
>Translated_693_residues MKKAASSFLSCMLLLALFIPNRQISAETSSERPDCRPEGLWDSGVEHVPYCDVYDKDGREKLANQLDRRIIGYFTSWRTG KGNQDRYLVSDIPWKYLSHINYAFAHIGEDHRISVGEEADENNPSIGMTWPEHPDVKMDQTLPYKGHFNLIHQYKDRYPD VKVLAAVGGWAETGGYVDKDGKRIPSGGFYSMTTNGDGSVNHKGIHTFAESVVAFLRKYEIDGIDIDYEYPTSMQDAGNP ADWNIANPRRNGLNKSFEALMKTLREKLDQASAEDGKYYMLTIAAPSSAYLLRGMETFKPLRYVDYVNIMSYDLHGAWNE FVGPNASLFDNGEDAELKQSNIYTTPEYEGIGYLNTDWAYHYFRGAVESGRINIGVPYYTRGWKNVTGGANGLWGRAKSA DCPQGLRQCGDGATGIDNIWHDKDEQGNEIGAGANPMWHAKNLEKGIAGSYLERYGLSKADLTGVYKRHYDAGLAAPWLW NPEKKVFLSTEDEESIKTKADYVIDKGIGGVMFWDLSGDYDWYPERNGSKGEYGIGNTLTRTMYHKFSDTTPYDNRLSTS PLPDESLDAEVELTNFPLGDQNYPIHPVMKLINNSDVTITGGSFIEFDAPTSTSPRFRSWSGDHVEVISKGHTGPNIGGL TVDFHRIRVTLSIWKTIKPGEEAEFQLVYYLPISGPSNFTISIDGKKYRLKGN >Mature_693_residues MKKAASSFLSCMLLLALFIPNRQISAETSSERPDCRPEGLWDSGVEHVPYCDVYDKDGREKLANQLDRRIIGYFTSWRTG KGNQDRYLVSDIPWKYLSHINYAFAHIGEDHRISVGEEADENNPSIGMTWPEHPDVKMDQTLPYKGHFNLIHQYKDRYPD VKVLAAVGGWAETGGYVDKDGKRIPSGGFYSMTTNGDGSVNHKGIHTFAESVVAFLRKYEIDGIDIDYEYPTSMQDAGNP ADWNIANPRRNGLNKSFEALMKTLREKLDQASAEDGKYYMLTIAAPSSAYLLRGMETFKPLRYVDYVNIMSYDLHGAWNE FVGPNASLFDNGEDAELKQSNIYTTPEYEGIGYLNTDWAYHYFRGAVESGRINIGVPYYTRGWKNVTGGANGLWGRAKSA DCPQGLRQCGDGATGIDNIWHDKDEQGNEIGAGANPMWHAKNLEKGIAGSYLERYGLSKADLTGVYKRHYDAGLAAPWLW NPEKKVFLSTEDEESIKTKADYVIDKGIGGVMFWDLSGDYDWYPERNGSKGEYGIGNTLTRTMYHKFSDTTPYDNRLSTS PLPDESLDAEVELTNFPLGDQNYPIHPVMKLINNSDVTITGGSFIEFDAPTSTSPRFRSWSGDHVEVISKGHTGPNIGGL TVDFHRIRVTLSIWKTIKPGEEAEFQLVYYLPISGPSNFTISIDGKKYRLKGN
Specific function: Hydrolyzes chitin oligosaccharides; (GlcNAc)4 to (GlcNAc)2 and (GlcNAc)5,6 to (GlcNAc)2 and (GlcNAc)3. Inactive towards chitin, glucosamine oligosaccharides, glycoproteins and glycopeptides containing (GlcNAc)2 [H]
COG id: COG3325
COG function: function code G; Chitinase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 18 family [H]
Homologues:
Organism=Homo sapiens, GI4502809, Length=478, Percent_Identity=24.4769874476987, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI133893286, Length=318, Percent_Identity=26.4150943396226, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI58386720, Length=340, Percent_Identity=23.5294117647059, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI144226251, Length=326, Percent_Identity=26.0736196319018, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI42542398, Length=181, Percent_Identity=30.3867403314917, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI68533253, Length=479, Percent_Identity=19.2066805845511, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI68533255, Length=479, Percent_Identity=19.2066805845511, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71995504, Length=532, Percent_Identity=26.3157894736842, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17559362, Length=475, Percent_Identity=24.8421052631579, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17563680, Length=464, Percent_Identity=24.3534482758621, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17551250, Length=450, Percent_Identity=22.4444444444444, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17535569, Length=407, Percent_Identity=23.5872235872236, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320579, Length=440, Percent_Identity=24.3181818181818, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI221330815, Length=480, Percent_Identity=23.3333333333333, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI45550474, Length=462, Percent_Identity=23.8095238095238, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI21358195, Length=506, Percent_Identity=22.3320158102767, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI24655584, Length=325, Percent_Identity=25.8461538461538, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI221329807, Length=456, Percent_Identity=20.8333333333333, Blast_Score=91, Evalue=4e-18, Organism=Drosophila melanogaster, GI161077700, Length=459, Percent_Identity=20.9150326797386, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI116007452, Length=314, Percent_Identity=25.1592356687898, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI22024049, Length=267, Percent_Identity=25.8426966292135, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR009470 - InterPro: IPR011583 - InterPro: IPR001223 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02839 CBM_5_12; PF06483 ChiC; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 77804; Mature: 77804
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAASSFLSCMLLLALFIPNRQISAETSSERPDCRPEGLWDSGVEHVPYCDVYDKDGRE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH KLANQLDRRIIGYFTSWRTGKGNQDRYLVSDIPWKYLSHINYAFAHIGEDHRISVGEEAD HHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCC ENNPSIGMTWPEHPDVKMDQTLPYKGHFNLIHQYKDRYPDVKVLAAVGGWAETGGYVDKD CCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHCCCEECCC GKRIPSGGFYSMTTNGDGSVNHKGIHTFAESVVAFLRKYEIDGIDIDYEYPTSMQDAGNP CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHCCCCC ADWNIANPRRNGLNKSFEALMKTLREKLDQASAEDGKYYMLTIAAPSSAYLLRGMETFKP CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCHHHHCC LRYVDYVNIMSYDLHGAWNEFVGPNASLFDNGEDAELKQSNIYTTPEYEGIGYLNTDWAY HHHHEEHEEEEEECCCCHHHHCCCCCCCCCCCCCCCEECCCCEECCCCCCCCEECCCHHH HYFRGAVESGRINIGVPYYTRGWKNVTGGANGLWGRAKSADCPQGLRQCGDGATGIDNIW HHHHCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHC HDKDEQGNEIGAGANPMWHAKNLEKGIAGSYLERYGLSKADLTGVYKRHYDAGLAAPWLW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE NPEKKVFLSTEDEESIKTKADYVIDKGIGGVMFWDLSGDYDWYPERNGSKGEYGIGNTLT CCCCEEEEECCCHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH RTMYHKFSDTTPYDNRLSTSPLPDESLDAEVELTNFPLGDQNYPIHPVMKLINNSDVTIT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEE GGSFIEFDAPTSTSPRFRSWSGDHVEVISKGHTGPNIGGLTVDFHRIRVTLSIWKTIKPG CCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEECCCCC EEAEFQLVYYLPISGPSNFTISIDGKKYRLKGN CCCCEEEEEEEECCCCCCEEEEECCEEEEECCC >Mature Secondary Structure MKKAASSFLSCMLLLALFIPNRQISAETSSERPDCRPEGLWDSGVEHVPYCDVYDKDGRE CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH KLANQLDRRIIGYFTSWRTGKGNQDRYLVSDIPWKYLSHINYAFAHIGEDHRISVGEEAD HHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCC ENNPSIGMTWPEHPDVKMDQTLPYKGHFNLIHQYKDRYPDVKVLAAVGGWAETGGYVDKD CCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHCCCEECCC GKRIPSGGFYSMTTNGDGSVNHKGIHTFAESVVAFLRKYEIDGIDIDYEYPTSMQDAGNP CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHCCCCC ADWNIANPRRNGLNKSFEALMKTLREKLDQASAEDGKYYMLTIAAPSSAYLLRGMETFKP CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCHHHHCC LRYVDYVNIMSYDLHGAWNEFVGPNASLFDNGEDAELKQSNIYTTPEYEGIGYLNTDWAY HHHHEEHEEEEEECCCCHHHHCCCCCCCCCCCCCCCEECCCCEECCCCCCCCEECCCHHH HYFRGAVESGRINIGVPYYTRGWKNVTGGANGLWGRAKSADCPQGLRQCGDGATGIDNIW HHHHCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHC HDKDEQGNEIGAGANPMWHAKNLEKGIAGSYLERYGLSKADLTGVYKRHYDAGLAAPWLW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE NPEKKVFLSTEDEESIKTKADYVIDKGIGGVMFWDLSGDYDWYPERNGSKGEYGIGNTLT CCCCEEEEECCCHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH RTMYHKFSDTTPYDNRLSTSPLPDESLDAEVELTNFPLGDQNYPIHPVMKLINNSDVTIT HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEE GGSFIEFDAPTSTSPRFRSWSGDHVEVISKGHTGPNIGGLTVDFHRIRVTLSIWKTIKPG CCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEECCCCC EEAEFQLVYYLPISGPSNFTISIDGKKYRLKGN CCCCEEEEEEEECCCCCCEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969204 [H]