Click here to switch to the map view.

The map label for this gene is ymfD [H]

Identifier: 52143436

GI number: 52143436

Start: 1928790

End: 1930088

Strand: Direct

Name: ymfD [H]

Synonym: BCZK1802

Alternate gene names: 52143436

Gene position: 1928790-1930088 (Clockwise)

Preceding gene: 52143435

Following gene: 52143430

Centisome position: 36.39

GC content: 36.41

Gene sequence:

>1299_bases
ATGAAAAATTACGTTCCAGCAGGGCTATTATATGGTAAGAAATATATGATGAAAGGTTTCGAAGCCAACATGTTAAAAAA
AGAAAACTGTTGTTTAATTGCGCTTGCATCAGTTCCACTTGTTATGACATTAGGGAATTCAATGCTCATCCCAATCCTGC
CGACTATTGAAAAGAAATTACATATTTCATCGTTTCAAGTATCCATGATTATTACAATTTACTCTATCGTAGCCATTCTA
CTTATACCGATTGCTGGTTATTTATCAGATAGATGGGGACGAAAGATGGTAATGGTTCCGAGTTTGCTGATTGCGGCTAT
AGGAGGAGCGATAACTGGTTGGGTATCTTGGAAAGTTGATAATCCCTACACTTGGATATTGATTGGTAGAGCGATTCAAG
GTATTGGTGCTGCTGGTGCAATGCCAGTTGTTATACCGTGTGTTGGTGATTTATACAAGGATGAAAAACAAGTTAGTACA
GGTTTAGGAATCATAGAAACATCCAATACATTTGGGAAAGTTCTGAGCCCTATTTTAGGGTCTGCTCTTGCAGCCATTGT
ATGGTTCTTACCCTTTTGGGCGATTCCAGTTTTATGCGTAGTATCAATTGTTTTATTACTTGTTCTAGTAAAGGCAAAGA
AACAAGAAGGAGAAGCGCCACCACTTAAAGAGTTTATAAAATCAATTGTTGCTACGTTTCGGGAAAAAGGAAGATGGTTA
ATTGCCATTTTTGCATTAGGTGCAATTATTATGCTTATTTTATTCGGAATTCTCTTTTATTTGTCAACTATATTGGAATC
AAAGTATGACATACATGGTATATGGAAAGGGTGTGTGCTTGCGATCCCATTACTTGTACTGTCACTTAGTTCATATATGG
CTGGTAAAAAAATTGGAGATAATCAAAATGTGATGAAGAAGTGTATTTATATTGGTTTTTTAATGGCAGCTGCATCAGTC
ATCATTCCTTTATTTATAAAAGGGATTTATTTACTACTTCTTTGTCTCGTTATTATGGGGATAGGAATTGGTATGGCACT
CCCGTGTTTAGATGCTTTAATTACACAAGGAATTGAAAAGGAGCAAAGGGGAACGGTTACGTCATTTTATAGTTCAATGC
GTTTTATCGGTGTAGCAGCTGGACCACCTCTATATTCTTTTTTCATGAAAGGCGCCGACCATGAAGTATTTTATTTAACA
AGTATATTTGCTGGGATTGGTGCTGCTATAGCAATTATTTGGATAAAACCAGCAAAAGATACAAAGACGGTAAACCAGAA
ACCGGAACCTACTTCATAA

Upstream 100 bases:

>100_bases
ATATTGTGAACTGGATTCAAATAATAGGAATAATACTATGTTTTTCCCAATTTCTTTTGTTGTGAATGGGAAGTAGTAAA
GATGTAATAGCCCTGGTGGA

Downstream 100 bases:

>100_bases
TTTGCAAGAGAATTGCATGATGTTTTCAGTAACATGCAATTCTCTTTCGTTCATTAGGGATAAATAACTTGTTTTAACAT
ATAAAGTGCGACACCCCATA

Product: permease; multidrug resistance protein

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKNYVPAGLLYGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEAPPLKEFIKSIVATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV
IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYLT
SIFAGIGAAIAIIWIKPAKDTKTVNQKPEPTS

Sequences:

>Translated_432_residues
MKNYVPAGLLYGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEAPPLKEFIKSIVATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV
IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYLT
SIFAGIGAAIAIIWIKPAKDTKTVNQKPEPTS
>Mature_432_residues
MKNYVPAGLLYGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEAPPLKEFIKSIVATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV
IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYLT
SIFAGIGAAIAIIWIKPAKDTKTVNQKPEPTS

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46963; Mature: 46963

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYVPAGLLYGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKL
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEHHHCCHHHHCCCCEEEECHHHHHHHH
HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHEEEEEEEEC
NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG
CCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
SALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEAPPLKEFIKSIVATFREKGRWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEE
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQNVMKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYLTSIFAGIGAAIAIIWIKPAKD
HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEECCCC
TKTVNQKPEPTS
CCCCCCCCCCCC
>Mature Secondary Structure
MKNYVPAGLLYGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKL
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEHHHCCHHHHCCCCEEEECHHHHHHHH
HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHEEEEEEEEC
NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG
CCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
SALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEAPPLKEFIKSIVATFREKGRWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEE
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQNVMKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYLTSIFAGIGAAIAIIWIKPAKD
HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEECCCC
TKTVNQKPEPTS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]