Click here to switch to the map view.

The map label for this gene is sspA [H]

Identifier: 52143435

GI number: 52143435

Start: 1928411

End: 1928623

Strand: Direct

Name: sspA [H]

Synonym: BCZK1801

Alternate gene names: 52143435

Gene position: 1928411-1928623 (Clockwise)

Preceding gene: 52143434

Following gene: 52143436

Centisome position: 36.38

GC content: 41.78

Gene sequence:

>213_bases
TTGGTAATGGCTAGAAATCGTAATTCTAATCAATTAGCATCACATGGAGCACAAGCGGCTTTAGATCAAATGAAATATGA
AATTGCACAAGAGTTTGGTGTACAACTTGGCGCTGATACTTCTTCACGTGCAAACGGTTCTGTAGGCGGTGAAATTACAA
AACGCCTAGTAGCGATGGCAGAACAACAACTTGGTGGCGGTTATACTCGCTAA

Upstream 100 bases:

>100_bases
CTCTCATTGTAGAGACTCTTTTTTAAAAATATTAATAACCAAAAATTACCATGTATTTAAATTGAAATTTAACACAATTT
ATATATAAATAAGGAGGTGA

Downstream 100 bases:

>100_bases
TTGTAGAAGGTTATAGGAGAAAGGAAGGATTCTTCCTTTCTTTTTTTTCAATTAATTGGTATGGATATATTGTGAACTGG
ATTCAAATAATAGGAATAAT

Product: small acid-soluble spore protein

Products: NA

Alternate protein names: SASP [H]

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MVMARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLGADTSSRANGSVGGEITKRLVAMAEQQLGGGYTR

Sequences:

>Translated_70_residues
MVMARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLGADTSSRANGSVGGEITKRLVAMAEQQLGGGYTR
>Mature_70_residues
MVMARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLGADTSSRANGSVGGEITKRLVAMAEQQLGGGYTR

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7442; Mature: 7442

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLGADTSSRANGSVGGEITKRLVAMA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EQQLGGGYTR
HHHHCCCCCC
>Mature Secondary Structure
MVMARNRNSNQLASHGAQAALDQMKYEIAQEFGVQLGADTSSRANGSVGGEITKRLVAMA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EQQLGGGYTR
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3080406 [H]